Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is rfaG [C]
Identifier: 187735144
GI number: 187735144
Start: 751262
End: 752407
Strand: Direct
Name: rfaG [C]
Synonym: Amuc_0638
Alternate gene names: 187735144
Gene position: 751262-752407 (Clockwise)
Preceding gene: 187735143
Following gene: 187735145
Centisome position: 28.2
GC content: 57.77
Gene sequence:
>1146_bases ATGCCGATCAAACGCCTCCGTCCCGTATTAGCCATAGCAGCGGACCTCCCTCTGGGCCGGCTGCTGACGTCTTTCCGTAA TAAGGACCGGCGTACGATTCCCTGGATTTTTTCCCTTTTTCATGCTCTGGAATCTCAGGAAGATTTTGACATCCACTGGA TCACCCTCAGCAAAGCCGTTTCTGCCCCGGAAACCATCCGGATGCGCAACCAGACCATCCACATTCTTCCCCTGGGCAGC ATGGGCAGGAATATCCTGACGGCCCATTTCCTGACCGTCCGGAGAATACGCAAGACCCTGAACGATATCCAGCCGGACCT CCTGCACGTATGGGGCGTGGAGCAGGCTTACGCTCTGGCGGGGATTGCCTTCCGGGGAAAGAAGCTCCTTTCCTACCAGG GAGCCCTCACCGCCTACTGCCAGCGCGCTCCGCAGGCCTTCCTCCTCCATATGCAGGCCCTCTGGGAACGGATGGCCGTC AAACATTATGATCTTATCACGTGCGAATCCCCCTGGGCGTGCGGCCGCGTTGCGGAAATTGCCCCCCATGCCCGTCTATC CTGCATGGAATACGGCGTGGAACCTTCCTTTTACCATCTTGCCAGAAAACCTTCCCCGGAACCTTCCTGCCTCTTTGCCG GAACCATTTACGAGTTGAAGGGCATTTCCTACCTGGTGGAGGCCTTTACGCATCCGTCCCTTTCCCATGTCCAGCTGTTC ATTGCGGGCAACGGAGCCCTCAGGGAAAGGCTGGAAGCCCTGTCCACTCCCAATATCCACTGGCTGGGCAGCATTTCCCG CGCAGAACTTCAGCAGCACCTTTCCACGGCGTGGTTCCTGGTGCATCCCACCCTGGGGGATTGCTGCCCCAACATCGTGA AGGAGGCAAGAGTCATGGGCCTTCCGGTAATCACCACGGAAGAAGGCGGACAGACTCAATATGTTCAGGACGGCGTATCC GGCTATATTGTCCCTGTCCGCAACAGCGCCGCCGTCAGGGAAGCCGCGCAGAAACTTTCCGTCAGCCTGGATAAAGCCAT GTCCATGGGAATGGAGCGGCATCAGGAATGCCGCCGCCTGCTGGACGTAAAGCAGACAGTAACCGGGTGCCTGTCACGTT ATCATACCATGCTGTATCCACGCTGA
Upstream 100 bases:
>100_bases CTTTTTTCCTCCATCCGCCCGGAAGGAAAGCCTCCGTTCGCGTCTTCCATCGTCCGGGAGCATTTACCCACCTGCTAACC TTGCCTCCTCTTTCCAATCC
Downstream 100 bases:
>100_bases TGAAATTATTCCTTATCCATCTGCTTTCCGGGATAGGCCGCCTGCTGCTCAGGCTCAGGGGGGTGCGCACCGGAACAGGC ATCATTCTTTCCGGATTTCC
Product: glycosyl transferase group 1
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Sugar Transferase; A-Glycosyltransferase; Glycosyl Transferase Group 1 Family
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MPIKRLRPVLAIAADLPLGRLLTSFRNKDRRTIPWIFSLFHALESQEDFDIHWITLSKAVSAPETIRMRNQTIHILPLGS MGRNILTAHFLTVRRIRKTLNDIQPDLLHVWGVEQAYALAGIAFRGKKLLSYQGALTAYCQRAPQAFLLHMQALWERMAV KHYDLITCESPWACGRVAEIAPHARLSCMEYGVEPSFYHLARKPSPEPSCLFAGTIYELKGISYLVEAFTHPSLSHVQLF IAGNGALRERLEALSTPNIHWLGSISRAELQQHLSTAWFLVHPTLGDCCPNIVKEARVMGLPVITTEEGGQTQYVQDGVS GYIVPVRNSAAVREAAQKLSVSLDKAMSMGMERHQECRRLLDVKQTVTGCLSRYHTMLYPR
Sequences:
>Translated_381_residues MPIKRLRPVLAIAADLPLGRLLTSFRNKDRRTIPWIFSLFHALESQEDFDIHWITLSKAVSAPETIRMRNQTIHILPLGS MGRNILTAHFLTVRRIRKTLNDIQPDLLHVWGVEQAYALAGIAFRGKKLLSYQGALTAYCQRAPQAFLLHMQALWERMAV KHYDLITCESPWACGRVAEIAPHARLSCMEYGVEPSFYHLARKPSPEPSCLFAGTIYELKGISYLVEAFTHPSLSHVQLF IAGNGALRERLEALSTPNIHWLGSISRAELQQHLSTAWFLVHPTLGDCCPNIVKEARVMGLPVITTEEGGQTQYVQDGVS GYIVPVRNSAAVREAAQKLSVSLDKAMSMGMERHQECRRLLDVKQTVTGCLSRYHTMLYPR >Mature_380_residues PIKRLRPVLAIAADLPLGRLLTSFRNKDRRTIPWIFSLFHALESQEDFDIHWITLSKAVSAPETIRMRNQTIHILPLGSM GRNILTAHFLTVRRIRKTLNDIQPDLLHVWGVEQAYALAGIAFRGKKLLSYQGALTAYCQRAPQAFLLHMQALWERMAVK HYDLITCESPWACGRVAEIAPHARLSCMEYGVEPSFYHLARKPSPEPSCLFAGTIYELKGISYLVEAFTHPSLSHVQLFI AGNGALRERLEALSTPNIHWLGSISRAELQQHLSTAWFLVHPTLGDCCPNIVKEARVMGLPVITTEEGGQTQYVQDGVSG YIVPVRNSAAVREAAQKLSVSLDKAMSMGMERHQECRRLLDVKQTVTGCLSRYHTMLYPR
Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42948; Mature: 42816
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIKRLRPVLAIAADLPLGRLLTSFRNKDRRTIPWIFSLFHALESQEDFDIHWITLSKAV CCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECHHH SAPETIRMRNQTIHILPLGSMGRNILTAHFLTVRRIRKTLNDIQPDLLHVWGVEQAYALA CCCHHHEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHH GIAFRGKKLLSYQGALTAYCQRAPQAFLLHMQALWERMAVKHYDLITCESPWACGRVAEI HHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHH APHARLSCMEYGVEPSFYHLARKPSPEPSCLFAGTIYELKGISYLVEAFTHPSLSHVQLF CCHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCEEEE IAGNGALRERLEALSTPNIHWLGSISRAELQQHLSTAWFLVHPTLGDCCPNIVKEARVMG EECCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHC LPVITTEEGGQTQYVQDGVSGYIVPVRNSAAVREAAQKLSVSLDKAMSMGMERHQECRRL CCEEEECCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDVKQTVTGCLSRYHTMLYPR HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PIKRLRPVLAIAADLPLGRLLTSFRNKDRRTIPWIFSLFHALESQEDFDIHWITLSKAV CHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECHHH SAPETIRMRNQTIHILPLGSMGRNILTAHFLTVRRIRKTLNDIQPDLLHVWGVEQAYALA CCCHHHEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHH GIAFRGKKLLSYQGALTAYCQRAPQAFLLHMQALWERMAVKHYDLITCESPWACGRVAEI HHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHH APHARLSCMEYGVEPSFYHLARKPSPEPSCLFAGTIYELKGISYLVEAFTHPSLSHVQLF CCHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCEEEE IAGNGALRERLEALSTPNIHWLGSISRAELQQHLSTAWFLVHPTLGDCCPNIVKEARVMG EECCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHC LPVITTEEGGQTQYVQDGVSGYIVPVRNSAAVREAAQKLSVSLDKAMSMGMERHQECRRL CCEEEECCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDVKQTVTGCLSRYHTMLYPR HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Glycosyltransferases; Hexosyltransferases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA