| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is maf1
Identifier: 187734051
GI number: 187734051
Start: 3054621
End: 3055214
Strand: Reverse
Name: maf1
Synonym: SbBS512_E3279
Alternate gene names: 187734051
Gene position: 3055214-3054621 (Counterclockwise)
Preceding gene: 187733946
Following gene: 187730668
Centisome position: 66.19
GC content: 53.7
Gene sequence:
>594_bases ATGACTTCTCTGTATTTAGCTTCCGGTTCTCCGCGTCGTCAGGAGTTACTTGCGCAACTTGGCGTGACCTTTGAACGTAT TGTTACGGGCATTGAGGAGCAGCGTCAGCCGCAGGAGAGCGCGCAGCAGTATGTTGTGCGTCTGGCACGCGAGAAAGCAC AGGCGGGTGTCGCGCAAACGGCGCAGGATCTCCCGGTGCTGGGTGCGGATACTATCGTTATCCTGAATGGAGAAGTGCTG GAGAAACCGCGCGACGCAGAGCATGCGGCGCAGATGTTGCGCAAATTATCGGGTCAGACCCATCAGGTGATGACGGCAGT GGTGTTGGCCGACAGCCAGCACATTCTCGATTGCCTGGTGGTCACCGATGTGACTTTCAGAACGTTAACAGACGAAGACA TCGCGGGCTATGTCGCCAGCGGTGAACCGTTAGATAAAGCAGGTGCATACGGTATTCAGGGGCTGGGTGGCTGTTTTGTC AGGAAGATAAATGGCAGCTATCACGCCGTAGTCGGCTTACCGCTGGTTGAAACGTATGAATTATTAAGTAATTTTAACGC ACTGCGTGAGAAAAGGGATAAACATGACGGCTGA
Upstream 100 bases:
>100_bases AAGTGTTCTGGAGTAGTGTAGTCAATGGGGTGCTCTGGCCGTGGATTTTCTTGCTGATGCGTAAAGTCCGTCAGCAGTTT GCAGTGCAATAAAGGTTTCT
Downstream 100 bases:
>100_bases ATTGTTAGTAAACGTAACGCCTTCGGAAACGCGAGTGGCGTATATTGATGGCGGTATTCTGCAGGAAATTCATATTGAAC GTGAGGCGCGACGCGGAATA
Product: Maf-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQYVVRLAREKAQAGVAQTAQDLPVLGADTIVILNGEVL EKPRDAEHAAQMLRKLSGQTHQVMTAVVLADSQHILDCLVVTDVTFRTLTDEDIAGYVASGEPLDKAGAYGIQGLGGCFV RKINGSYHAVVGLPLVETYELLSNFNALREKRDKHDG
Sequences:
>Translated_197_residues MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQYVVRLAREKAQAGVAQTAQDLPVLGADTIVILNGEVL EKPRDAEHAAQMLRKLSGQTHQVMTAVVLADSQHILDCLVVTDVTFRTLTDEDIAGYVASGEPLDKAGAYGIQGLGGCFV RKINGSYHAVVGLPLVETYELLSNFNALREKRDKHDG >Mature_196_residues TSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQYVVRLAREKAQAGVAQTAQDLPVLGADTIVILNGEVLE KPRDAEHAAQMLRKLSGQTHQVMTAVVLADSQHILDCLVVTDVTFRTLTDEDIAGYVASGEPLDKAGAYGIQGLGGCFVR KINGSYHAVVGLPLVETYELLSNFNALREKRDKHDG
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
Organism=Homo sapiens, GI117553627, Length=185, Percent_Identity=42.1621621621622, Blast_Score=122, Evalue=2e-28, Organism=Homo sapiens, GI291045183, Length=178, Percent_Identity=39.3258426966292, Blast_Score=108, Evalue=3e-24, Organism=Homo sapiens, GI291045181, Length=145, Percent_Identity=43.448275862069, Blast_Score=102, Evalue=2e-22, Organism=Homo sapiens, GI310133124, Length=118, Percent_Identity=47.4576271186441, Blast_Score=101, Evalue=3e-22, Organism=Escherichia coli, GI1789646, Length=197, Percent_Identity=97.9695431472081, Blast_Score=394, Evalue=1e-111, Organism=Escherichia coli, GI87081830, Length=185, Percent_Identity=35.6756756756757, Blast_Score=104, Evalue=5e-24, Organism=Caenorhabditis elegans, GI193202443, Length=192, Percent_Identity=35.9375, Blast_Score=103, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6324685, Length=202, Percent_Identity=31.1881188118812, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI78706856, Length=177, Percent_Identity=40.6779661016949, Blast_Score=124, Evalue=6e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 21458; Mature: 21326
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQYVVRLAREKAQAGVAQT CCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH AQDLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQVMTAVVLADSQHILDCLV HHCCCCCCCCEEEEECCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH VTDVTFRTLTDEDIAGYVASGEPLDKAGAYGIQGLGGCFVRKINGSYHAVVGLPLVETYE HHHHHHHHCCCHHHHCEECCCCCCHHHCCCCCCCCCHHHEEEECCCEEEEECCCHHHHHH LLSNFNALREKRDKHDG HHHHHHHHHHHHHCCCC >Mature Secondary Structure TSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQYVVRLAREKAQAGVAQT CEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH AQDLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQVMTAVVLADSQHILDCLV HHCCCCCCCCEEEEECCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH VTDVTFRTLTDEDIAGYVASGEPLDKAGAYGIQGLGGCFVRKINGSYHAVVGLPLVETYE HHHHHHHHCCCHHHHCEECCCCCCHHHCCCCCCCCCHHHEEEECCCEEEEECCCHHHHHH LLSNFNALREKRDKHDG HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA