Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

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The map label for this gene is yqjB [H]

Identifier: 187733746

GI number: 187733746

Start: 3040640

End: 3041023

Strand: Reverse

Name: yqjB [H]

Synonym: SbBS512_E3265

Alternate gene names: 187733746

Gene position: 3041023-3040640 (Counterclockwise)

Preceding gene: 187730254

Following gene: 187733552

Centisome position: 65.88

GC content: 53.91

Gene sequence:

>384_bases
ATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCACTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGC
CTGGTCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGTTTTT
CGATCTGGCATCACCTTGACGCTCATGGCATTCCTTTCAAAAGTATCACCCCCAAAAACGACACTCTGTTAATTACATTT
GACTCCAGCGACCAGAGCGCCGCCGCAAAAGCGGTCCTCGACAGAACATTGCCCCATGGCTACATCATTGCGCAGCAGGA
CAATAACAGTCAGGCTATGCAGTGGCTGACCCGGTTACGGGATAACTCTCATCGCTTCGGATAA

Upstream 100 bases:

>100_bases
GTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAAT
ATGGAAATCGGGGGTAAGGG

Downstream 100 bases:

>100_bases
CTTCCTGTTATCCGAAACATATCACTCACTTTGGTGATTTCACCGTAACTGTCTATGATTAATGAGGCGGTGGTTAACAC
TACCGCTTCGTTGTCTGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MQIPRMSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIRAVHQGTTMPDGFSIWHHLDAHGIPFKSITPKNDTLLITF
DSSDQSAAAKAVLDRTLPHGYIIAQQDNNSQAMQWLTRLRDNSHRFG

Sequences:

>Translated_127_residues
MQIPRMSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIRAVHQGTTMPDGFSIWHHLDAHGIPFKSITPKNDTLLITF
DSSDQSAAAKAVLDRTLPHGYIIAQQDNNSQAMQWLTRLRDNSHRFG
>Mature_127_residues
MQIPRMSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIRAVHQGTTMPDGFSIWHHLDAHGIPFKSITPKNDTLLITF
DSSDQSAAAKAVLDRTLPHGYIIAQQDNNSQAMQWLTRLRDNSHRFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789482, Length=127, Percent_Identity=99.2125984251969, Blast_Score=258, Evalue=1e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14202; Mature: 14202

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIPRMSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIRAVHQGTTMPDGFSIWHHLD
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHCC
AHGIPFKSITPKNDTLLITFDSSDQSAAAKAVLDRTLPHGYIIAQQDNNSQAMQWLTRLR
CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH
DNSHRFG
CCCCCCC
>Mature Secondary Structure
MQIPRMSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIRAVHQGTTMPDGFSIWHHLD
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHCC
AHGIPFKSITPKNDTLLITFDSSDQSAAAKAVLDRTLPHGYIIAQQDNNSQAMQWLTRLR
CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH
DNSHRFG
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]