| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is znuB
Identifier: 187733450
GI number: 187733450
Start: 884202
End: 884987
Strand: Direct
Name: znuB
Synonym: SbBS512_E0955
Alternate gene names: 187733450
Gene position: 884202-884987 (Clockwise)
Preceding gene: 187733900
Following gene: 187730977
Centisome position: 19.16
GC content: 51.53
Gene sequence:
>786_bases ATGATTGAATTATTATTTCCCGGTTGGTTAGCCGGGATCATGCTCGCCTGTGCCGCGGGTCCGCTGGGTTCGTTTGTAGT CTGGCGTCGTATGTCTTATTTCGGTGATACGCTGGCTCATGCCTCATTACTTGGCGTCGCGTTTGGTTTGTTGCTGGACG TGAATCCATTCTATGCGGTAATTGCCGTTACGCTGCTCCTGGCGGGCGGTCTGGTATGGCTGGAGAAGCGTCCACAGCTG GCGATTGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTTAGTCTGATGTCTAACAT TCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGCCAGAAGATCTCATCGCTATTGCGATTGGCG TGGTCATCGTGGTGGCTATTTTGTTCTGGCAATGGCGCAATTTGCTGTCGATGACGATTAGCCCGGATCTGGCGTTTGTT GATGGTGTGAAATTACAGCGCGTGAAATTGTTGTTGATGCTGGTGACGGCATTGACGATTGGTGTAGCGATGAAATTTGT TGGCGCGTTGATTATTACTTCACTGCTGATTATTCCTGCTGCTACTGCACGTCGCTTTGCCCGCACGCCGGAACAGATGG CAGGTGTCGCTGTGTTGGTGGGGATGGTTGCCGTAACGGGCGGTTTAACCTTTTCCGCATTTTACGATACGCCGGCGGGT CCGTCGGTGGTGCTATGTGCAGCACTGTTATTTATTATCAGTATGATGAAAAAGCAGGCCAGCTAA
Upstream 100 bases:
>100_bases GTCCTCGTGGTGCTGAACAACTGGGTATCTATCGCCATCATCATAATCATCGTCACGATTTACAGGGACGAATTGTTTTG CGTCGGGGAAATGATCGCTC
Downstream 100 bases:
>100_bases TCTATCGCTGAACACATTTGTCGGATGCGGCGCGAGCGACCAATCCGACTTACGGCATTTCTGGCGGCGTTATGCCAAAG TGATTCCACGCCCGCGTCGT
Product: high-affinity zinc transporter membrane component
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MIELLFPGWLAGIMLACAAGPLGSFVVWRRMSYFGDTLAHASLLGVAFGLLLDVNPFYAVIAVTLLLAGGLVWLEKRPQL AIDTLLGIMAHSALSLGLVVVSLMSNIRVDLMAYLFGDLLAVTPEDLIAIAIGVVIVVAILFWQWRNLLSMTISPDLAFV DGVKLQRVKLLLMLVTALTIGVAMKFVGALIITSLLIIPAATARRFARTPEQMAGVAVLVGMVAVTGGLTFSAFYDTPAG PSVVLCAALLFIISMMKKQAS
Sequences:
>Translated_261_residues MIELLFPGWLAGIMLACAAGPLGSFVVWRRMSYFGDTLAHASLLGVAFGLLLDVNPFYAVIAVTLLLAGGLVWLEKRPQL AIDTLLGIMAHSALSLGLVVVSLMSNIRVDLMAYLFGDLLAVTPEDLIAIAIGVVIVVAILFWQWRNLLSMTISPDLAFV DGVKLQRVKLLLMLVTALTIGVAMKFVGALIITSLLIIPAATARRFARTPEQMAGVAVLVGMVAVTGGLTFSAFYDTPAG PSVVLCAALLFIISMMKKQAS >Mature_261_residues MIELLFPGWLAGIMLACAAGPLGSFVVWRRMSYFGDTLAHASLLGVAFGLLLDVNPFYAVIAVTLLLAGGLVWLEKRPQL AIDTLLGIMAHSALSLGLVVVSLMSNIRVDLMAYLFGDLLAVTPEDLIAIAIGVVIVVAILFWQWRNLLSMTISPDLAFV DGVKLQRVKLLLMLVTALTIGVAMKFVGALIITSLLIIPAATARRFARTPEQMAGVAVLVGMVAVTGGLTFSAFYDTPAG PSVVLCAALLFIISMMKKQAS
Specific function: Involved in the high-affinity zinc uptake transport system [H]
COG id: COG1108
COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-3 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1788166, Length=261, Percent_Identity=98.8505747126437, Blast_Score=502, Evalue=1e-143,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001626 [H]
Pfam domain/function: PF00950 ABC-3 [H]
EC number: NA
Molecular weight: Translated: 27761; Mature: 27761
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIELLFPGWLAGIMLACAAGPLGSFVVWRRMSYFGDTLAHASLLGVAFGLLLDVNPFYAV CCEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH IAVTLLLAGGLVWLEKRPQLAIDTLLGIMAHSALSLGLVVVSLMSNIRVDLMAYLFGDLL HHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVTPEDLIAIAIGVVIVVAILFWQWRNLLSMTISPDLAFVDGVKLQRVKLLLMLVTALTI HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHH GVAMKFVGALIITSLLIIPAATARRFARTPEQMAGVAVLVGMVAVTGGLTFSAFYDTPAG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC PSVVLCAALLFIISMMKKQAS HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIELLFPGWLAGIMLACAAGPLGSFVVWRRMSYFGDTLAHASLLGVAFGLLLDVNPFYAV CCEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH IAVTLLLAGGLVWLEKRPQLAIDTLLGIMAHSALSLGLVVVSLMSNIRVDLMAYLFGDLL HHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVTPEDLIAIAIGVVIVVAILFWQWRNLLSMTISPDLAFVDGVKLQRVKLLLMLVTALTI HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHH GVAMKFVGALIITSLLIIPAATARRFARTPEQMAGVAVLVGMVAVTGGLTFSAFYDTPAG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC PSVVLCAALLFIISMMKKQAS HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 2842314; 7984428; 9680209 [H]