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The map label for this gene is ugd [H]

Identifier: 187733407

GI number: 187733407

Start: 1110512

End: 1111678

Strand: Direct

Name: ugd [H]

Synonym: SbBS512_E1203

Alternate gene names: 187733407

Gene position: 1110512-1111678 (Clockwise)

Preceding gene: 187732842

Following gene: 187732514

Centisome position: 24.06

GC content: 41.65

Gene sequence:

>1167_bases
ATGAAAATAACAATTTCAGGAACAGGTTATGTTGGTCTTTCAAATGGTATTCTGATTGCGCAAAACCACGAAGTGGTTGC
ACTGGATATCGTTCAGGCCAAAGTGGACATGCTTAACAAGAAGCAGTCACCGATTGTTGATAAGGAGATTGAAGAGTATC
TGGCGACTAAAGATCTCAATTTCCGCGCTACGACAGATAAGTATGACGCGTATAAAAATGCCGATTACGTTATTATTGCC
ACACCTACCGATTATGATCCGAAAACGAATTATTTTAATACCTCAAGCGTGGAAGCGGTCATTCGCGATGTGACAGAAAT
TAATCCCAACGCGGTAATGATTATAAAATCAACTATCCCTGTTGGTTTTACAGAGTCCATTAAAGAACGTTTTGGTATTG
AAAATGTGATCTTTTCGCCTGAGTTTTTGCGTGAAGGTAAAGCACTTTATGATAACTTGCATCCATCACGCATTGTGATT
GGTGAGCAATCCGATCGCGCTGAACGTTTTGCAGCGTTATTACAGGAAGGCGCTATTAAGCAAGACATACCAATATTGTT
TACTGACTCAACCGAGGCTGAGGCGATTAAACTTTTTGCCAATACTTATCTGGCGATGCGTGTGGCTTATTTTAATGAAC
TAGATAGTTACGCTGAAAGTCTGGGTCTTAACTCCCGCCAAATTATTGAGGGGGTTTGCCTTGATCCGCGTATCGGTAAT
CACTACAACAATCCCTCATTTGGTTATGGTGGTTATTGTCTGCCGAAAGATACCAAGCAGTTACTGGCAAACTATCAATC
TGTACCGAATAATCTGATTTCGGCAATTGTTGATGCTAACCGCACGCGAAAAGACTTTATTGCCGATTCTATCCTTGCAC
GTAAACCGAAAGTTGTTGGCGTTTATCGTCTGATTATGAAGAGTGGTTCAGACAATTTCCGTGCTTCCTCGATTCAGGGG
ATTATGAAGCGAATCAAGGCGAAAGGTGTGCCAGTAATCGTTTATGAGCCAGCGATGAAAGAGAACGATTTTTTTCGTTC
GCGCGTGGTACGTGATCTGGATGCGTTCAAACAAGAAGCTGATGTTATTATTTCTAACCGTATGTCTGCCGATCTGGCTG
ATGTAGCAGATAAAGTTTATACGCGCGACTTGTTTGGCAATGATTAA

Upstream 100 bases:

>100_bases
ACAGTTCATATACATCAGCGTTAAAAATCCCGCAGTAGATGAAGTTGTGGTGGTGGATTAATGACCACTCTAAATGTTTA
ACCGGAAGAAGTCAGAGCTA

Downstream 100 bases:

>100_bases
TTATTTTGTTTTATTCTAAGAAAAGGCCCTAATATATTAGGGCCTTTTCTTATGGTTTTGTAAAATCAAACTTTATAGAA
GTTACGATACCATTCTACAA

Product: UDP-glucose 6-dehydrogenase

Products: NA

Alternate protein names: UDP-Glc dehydrogenase; UDP-GlcDH; UDPGDH [H]

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MKITISGTGYVGLSNGILIAQNHEVVALDIVQAKVDMLNKKQSPIVDKEIEEYLATKDLNFRATTDKYDAYKNADYVIIA
TPTDYDPKTNYFNTSSVEAVIRDVTEINPNAVMIIKSTIPVGFTESIKERFGIENVIFSPEFLREGKALYDNLHPSRIVI
GEQSDRAERFAALLQEGAIKQDIPILFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAESLGLNSRQIIEGVCLDPRIGN
HYNNPSFGYGGYCLPKDTKQLLANYQSVPNNLISAIVDANRTRKDFIADSILARKPKVVGVYRLIMKSGSDNFRASSIQG
IMKRIKAKGVPVIVYEPAMKENDFFRSRVVRDLDAFKQEADVIISNRMSADLADVADKVYTRDLFGND

Sequences:

>Translated_388_residues
MKITISGTGYVGLSNGILIAQNHEVVALDIVQAKVDMLNKKQSPIVDKEIEEYLATKDLNFRATTDKYDAYKNADYVIIA
TPTDYDPKTNYFNTSSVEAVIRDVTEINPNAVMIIKSTIPVGFTESIKERFGIENVIFSPEFLREGKALYDNLHPSRIVI
GEQSDRAERFAALLQEGAIKQDIPILFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAESLGLNSRQIIEGVCLDPRIGN
HYNNPSFGYGGYCLPKDTKQLLANYQSVPNNLISAIVDANRTRKDFIADSILARKPKVVGVYRLIMKSGSDNFRASSIQG
IMKRIKAKGVPVIVYEPAMKENDFFRSRVVRDLDAFKQEADVIISNRMSADLADVADKVYTRDLFGND
>Mature_388_residues
MKITISGTGYVGLSNGILIAQNHEVVALDIVQAKVDMLNKKQSPIVDKEIEEYLATKDLNFRATTDKYDAYKNADYVIIA
TPTDYDPKTNYFNTSSVEAVIRDVTEINPNAVMIIKSTIPVGFTESIKERFGIENVIFSPEFLREGKALYDNLHPSRIVI
GEQSDRAERFAALLQEGAIKQDIPILFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAESLGLNSRQIIEGVCLDPRIGN
HYNNPSFGYGGYCLPKDTKQLLANYQSVPNNLISAIVDANRTRKDFIADSILARKPKVVGVYRLIMKSGSDNFRASSIQG
IMKRIKAKGVPVIVYEPAMKENDFFRSRVVRDLDAFKQEADVIISNRMSADLADVADKVYTRDLFGND

Specific function: Unknown

COG id: COG1004

COG function: function code M; Predicted UDP-glucose 6-dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507813, Length=384, Percent_Identity=29.4270833333333, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI296040438, Length=279, Percent_Identity=29.0322580645161, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI296040443, Length=232, Percent_Identity=28.448275862069, Blast_Score=83, Evalue=4e-16,
Organism=Escherichia coli, GI1788340, Length=388, Percent_Identity=83.5051546391753, Blast_Score=680, Evalue=0.0,
Organism=Escherichia coli, GI48994968, Length=289, Percent_Identity=26.643598615917, Blast_Score=86, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17560350, Length=397, Percent_Identity=26.9521410579345, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI17136908, Length=370, Percent_Identity=26.2162162162162, Blast_Score=117, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR016040
- InterPro:   IPR017476
- InterPro:   IPR014027
- InterPro:   IPR014026
- InterPro:   IPR014028
- InterPro:   IPR001732 [H]

Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]

EC number: =1.1.1.22 [H]

Molecular weight: Translated: 43421; Mature: 43421

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITISGTGYVGLSNGILIAQNHEVVALDIVQAKVDMLNKKQSPIVDKEIEEYLATKDLN
CEEEEECCCEEEECCCEEEECCCCEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
FRATTDKYDAYKNADYVIIATPTDYDPKTNYFNTSSVEAVIRDVTEINPNAVMIIKSTIP
EEECCCHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCC
VGFTESIKERFGIENVIFSPEFLREGKALYDNLHPSRIVIGEQSDRAERFAALLQEGAIK
CCHHHHHHHHCCCCCEEECHHHHHCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCC
QDIPILFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAESLGLNSRQIIEGVCLDPRIGN
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCEECCCCCCC
HYNNPSFGYGGYCLPKDTKQLLANYQSVPNNLISAIVDANRTRKDFIADSILARKPKVVG
CCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHH
VYRLIMKSGSDNFRASSIQGIMKRIKAKGVPVIVYEPAMKENDFFRSRVVRDLDAFKQEA
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
DVIISNRMSADLADVADKVYTRDLFGND
HHHHHCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKITISGTGYVGLSNGILIAQNHEVVALDIVQAKVDMLNKKQSPIVDKEIEEYLATKDLN
CEEEEECCCEEEECCCEEEECCCCEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
FRATTDKYDAYKNADYVIIATPTDYDPKTNYFNTSSVEAVIRDVTEINPNAVMIIKSTIP
EEECCCHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCC
VGFTESIKERFGIENVIFSPEFLREGKALYDNLHPSRIVIGEQSDRAERFAALLQEGAIK
CCHHHHHHHHCCCCCEEECHHHHHCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCC
QDIPILFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAESLGLNSRQIIEGVCLDPRIGN
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCEECCCCCCC
HYNNPSFGYGGYCLPKDTKQLLANYQSVPNNLISAIVDANRTRKDFIADSILARKPKVVG
CCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHH
VYRLIMKSGSDNFRASSIQGIMKRIKAKGVPVIVYEPAMKENDFFRSRVVRDLDAFKQEA
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
DVIISNRMSADLADVADKVYTRDLFGND
HHHHHCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9383197 [H]