Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

Click here to switch to the map view.

The map label for this gene is 187732866

Identifier: 187732866

GI number: 187732866

Start: 901044

End: 901238

Strand: Direct

Name: 187732866

Synonym: SbBS512_E0976

Alternate gene names: NA

Gene position: 901044-901238 (Clockwise)

Preceding gene: 187733604

Following gene: 187731897

Centisome position: 19.52

GC content: 46.67

Gene sequence:

>195_bases
TTGCCATGTTTTACGGCAATGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGTTTTTGCCGTTACGCACCACGCCTTCAG
TAGCGGAGCAGGAAGGACATCTGATGGAAATGGAAGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAA
GTTGGCAGCATTACCACCTGCTACATATAGATTAA

Upstream 100 bases:

>100_bases
CCATAATGCGTGCACTGGCGCGACATCCGACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGCTGAGAG
GCGGTGTAAGTGAACTGTAG

Downstream 100 bases:

>100_bases
CAATCTTCGGTGCTTCATGTTATTTTTTGCACTCTGTGACCGTTATCCTGTGGTGAAAATACAATCTGGTGCAGACTGTC
ATGGTACATTTCCGAATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase; Glycosy Hydrolase Family; Outer Membrane Fimbrial User Protein; Allantoinase; Ankyrin-Repeat Protein A; Efflux Pump Component MtrF; Minor Fimbrial Subunit

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MPCFTAMRAEIALMSGSVFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYHLLHID

Sequences:

>Translated_64_residues
MPCFTAMRAEIALMSGSVFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYHLLHID
>Mature_63_residues
PCFTAMRAEIALMSGSVFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYHLLHID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6879; Mature: 6748

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCFTAMRAEIALMSGSVFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYHL
CCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
LHID
EEEC
>Mature Secondary Structure 
PCFTAMRAEIALMSGSVFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYHL
CCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
LHID
EEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA