Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

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The map label for this gene is yeeV

Identifier: 187732465

GI number: 187732465

Start: 1022993

End: 1023367

Strand: Direct

Name: yeeV

Synonym: SbBS512_E1128

Alternate gene names: 187732465

Gene position: 1022993-1023367 (Clockwise)

Preceding gene: 187733038

Following gene: 187733728

Centisome position: 22.16

GC content: 53.07

Gene sequence:

>375_bases
ATGAAAACATTACCTGTATTACCCGGGCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTC
CCGACTGCTGGACCAGCACTATGGCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGATTGAGCAGCATATTG
AGGCAGGCATTTCACTGTGTGATGCGGTGAACTTTCTCGTGGAAAAATACGCGCTGGTGCGTACCGACCAGCCGGGATTC
AGCGCCTGTACCCGCTCTCAGTTAATAAACAGCATCGATATCCTCCGGGCTCGCAGGGCGACCGGCCTGATGACCCGCGA
CAATTACAGAACGGTAAATAACATTACCCTGGGTAAGTATCCGGAGGCGAAATGA

Upstream 100 bases:

>100_bases
ATGAAAAATTAACTCTCCAGAATAGCCTTCTGCTACGGCCTGGTGTTTTCACCACGCCACTTTTCCATTTTTATATCTGC
ATATCAGGAAAATCTTCAGT

Downstream 100 bases:

>100_bases
TGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGATATGGGACACATTGTCGTTGACATTGATGGTGTTAATATC
ACTGAACTGATTAATAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MKTLPVLPGQAASSRPSPVEIWQILLSRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGF
SACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKYPEAK

Sequences:

>Translated_124_residues
MKTLPVLPGQAASSRPSPVEIWQILLSRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGF
SACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKYPEAK
>Mature_124_residues
MKTLPVLPGQAASSRPSPVEIWQILLSRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGF
SACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKYPEAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ypjF and ykfI

Homologues:

Organism=Escherichia coli, GI1788315, Length=124, Percent_Identity=100, Blast_Score=258, Evalue=8e-71,
Organism=Escherichia coli, GI1788999, Length=104, Percent_Identity=65.3846153846154, Blast_Score=141, Evalue=1e-35,
Organism=Escherichia coli, GI1786439, Length=110, Percent_Identity=60, Blast_Score=135, Evalue=8e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YEEV_ECOL6 (P64525)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_754419.1
- EnsemblBacteria:   EBESCT00000041162
- GeneID:   1037803
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c2532
- GeneTree:   EBGT00050000010449
- HOGENOM:   HBG677427
- OMA:   MVNDISQ
- ProtClustDB:   CLSK880263
- InterPro:   IPR009610

Pfam domain/function: PF06755 DUF1219

EC number: NA

Molecular weight: Translated: 13899; Mature: 13899

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLPVLPGQAASSRPSPVEIWQILLSRLLDQHYGLTLNDTPFADERVIEQHIEAGISLC
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
DAVNFLVEKYALVRTDQPGFSACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKY
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PEAK
CCCC
>Mature Secondary Structure
MKTLPVLPGQAASSRPSPVEIWQILLSRLLDQHYGLTLNDTPFADERVIEQHIEAGISLC
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
DAVNFLVEKYALVRTDQPGFSACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKY
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PEAK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157