Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
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Accession | NC_010658 |
Length | 4,615,997 |
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The map label for this gene is yeeV
Identifier: 187732465
GI number: 187732465
Start: 1022993
End: 1023367
Strand: Direct
Name: yeeV
Synonym: SbBS512_E1128
Alternate gene names: 187732465
Gene position: 1022993-1023367 (Clockwise)
Preceding gene: 187733038
Following gene: 187733728
Centisome position: 22.16
GC content: 53.07
Gene sequence:
>375_bases ATGAAAACATTACCTGTATTACCCGGGCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTC CCGACTGCTGGACCAGCACTATGGCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGATTGAGCAGCATATTG AGGCAGGCATTTCACTGTGTGATGCGGTGAACTTTCTCGTGGAAAAATACGCGCTGGTGCGTACCGACCAGCCGGGATTC AGCGCCTGTACCCGCTCTCAGTTAATAAACAGCATCGATATCCTCCGGGCTCGCAGGGCGACCGGCCTGATGACCCGCGA CAATTACAGAACGGTAAATAACATTACCCTGGGTAAGTATCCGGAGGCGAAATGA
Upstream 100 bases:
>100_bases ATGAAAAATTAACTCTCCAGAATAGCCTTCTGCTACGGCCTGGTGTTTTCACCACGCCACTTTTCCATTTTTATATCTGC ATATCAGGAAAATCTTCAGT
Downstream 100 bases:
>100_bases TGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGATATGGGACACATTGTCGTTGACATTGATGGTGTTAATATC ACTGAACTGATTAATAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MKTLPVLPGQAASSRPSPVEIWQILLSRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGF SACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKYPEAK
Sequences:
>Translated_124_residues MKTLPVLPGQAASSRPSPVEIWQILLSRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGF SACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKYPEAK >Mature_124_residues MKTLPVLPGQAASSRPSPVEIWQILLSRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGF SACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKYPEAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli ypjF and ykfI
Homologues:
Organism=Escherichia coli, GI1788315, Length=124, Percent_Identity=100, Blast_Score=258, Evalue=8e-71, Organism=Escherichia coli, GI1788999, Length=104, Percent_Identity=65.3846153846154, Blast_Score=141, Evalue=1e-35, Organism=Escherichia coli, GI1786439, Length=110, Percent_Identity=60, Blast_Score=135, Evalue=8e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YEEV_ECOL6 (P64525)
Other databases:
- EMBL: AE014075 - RefSeq: NP_754419.1 - EnsemblBacteria: EBESCT00000041162 - GeneID: 1037803 - GenomeReviews: AE014075_GR - KEGG: ecc:c2532 - GeneTree: EBGT00050000010449 - HOGENOM: HBG677427 - OMA: MVNDISQ - ProtClustDB: CLSK880263 - InterPro: IPR009610
Pfam domain/function: PF06755 DUF1219
EC number: NA
Molecular weight: Translated: 13899; Mature: 13899
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLPVLPGQAASSRPSPVEIWQILLSRLLDQHYGLTLNDTPFADERVIEQHIEAGISLC CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH DAVNFLVEKYALVRTDQPGFSACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKY HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PEAK CCCC >Mature Secondary Structure MKTLPVLPGQAASSRPSPVEIWQILLSRLLDQHYGLTLNDTPFADERVIEQHIEAGISLC CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH DAVNFLVEKYALVRTDQPGFSACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKY HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PEAK CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157