Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
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Accession | NC_010658 |
Length | 4,615,997 |
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The map label for this gene is gatA
Identifier: 187732330
GI number: 187732330
Start: 1036560
End: 1037012
Strand: Direct
Name: gatA
Synonym: SbBS512_E1144
Alternate gene names: 187732330
Gene position: 1036560-1037012 (Clockwise)
Preceding gene: 187731954
Following gene: 187732850
Centisome position: 22.46
GC content: 42.6
Gene sequence:
>453_bases ATGACTAACCTGTTTGTTCGTAGCGGAATTTCTTTTGTCGATCGTAGCGAAGTTTTAACCCATATCGGTAATGAGATGCT CGCCAAAGGTGTGGTTCATGATACCAGGCCACAGGCATTAATTGCCAGAGAAGCAGAATTCCCTACCGGGATAATGCTTG AGCAGCACGCCATTGCAATACCGCATTGTGAGGCGATTCATGCTAAGTCGTCAGCCATTTATCTGTTAAGGCCAACAAAT AAAGTTCATTTTCAGCAAGCGGATGATGATAACGACGTGGAGGTATCGTTGGTTATTGCGTTGATTGTGGAAAATCCGCA GCAGCAATTGAAACTTTTACGCTGTTTATTTGGCAAGTTACAACAGCCCGATATCGTCGAGACACTAATCACTCTTCCTG AAACCCAGTTAAAGGAATACTTCACAAAGTATGTTTTAGATTCAGACGAATAA
Upstream 100 bases:
>100_bases GTCCGGGGAATTATCAGCAATACCGCATCAGCTGATTATGGATAAAATTTATGATGTTTTGCGCGCCTATCGCTACGGCT GTGCGGAATAAGGACGGTAT
Downstream 100 bases:
>100_bases ATCCCTCTGTAACAATAAAAAGGACTATTTATGAAACGCAAGATTATTGTCGCTTGCGGAGGCGCGGTTGCGACCTCTAC GATGGCGGCGGAAGAAATTA
Product: PTS system galactitol-specific transporter subunit IIA
Products: protein histidine; sugar phosphate
Alternate protein names: EIIA-Gat; PTS system galactitol-specific EIIA component [H]
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MTNLFVRSGISFVDRSEVLTHIGNEMLAKGVVHDTRPQALIAREAEFPTGIMLEQHAIAIPHCEAIHAKSSAIYLLRPTN KVHFQQADDDNDVEVSLVIALIVENPQQQLKLLRCLFGKLQQPDIVETLITLPETQLKEYFTKYVLDSDE
Sequences:
>Translated_150_residues MTNLFVRSGISFVDRSEVLTHIGNEMLAKGVVHDTRPQALIAREAEFPTGIMLEQHAIAIPHCEAIHAKSSAIYLLRPTN KVHFQQADDDNDVEVSLVIALIVENPQQQLKLLRCLFGKLQQPDIVETLITLPETQLKEYFTKYVLDSDE >Mature_149_residues TNLFVRSGISFVDRSEVLTHIGNEMLAKGVVHDTRPQALIAREAEFPTGIMLEQHAIAIPHCEAIHAKSSAIYLLRPTNK VHFQQADDDNDVEVSLVIALIVENPQQQLKLLRCLFGKLQQPDIVETLITLPETQLKEYFTKYVLDSDE
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1762
COG function: function code GT; Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1788410, Length=150, Percent_Identity=98.6666666666667, Blast_Score=305, Evalue=1e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016152 - InterPro: IPR002178 [H]
Pfam domain/function: PF00359 PTS_EIIA_2 [H]
EC number: 2.7.1.69
Molecular weight: Translated: 16936; Mature: 16804
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS51094 PTS_EIIA_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLFVRSGISFVDRSEVLTHIGNEMLAKGVVHDTRPQALIAREAEFPTGIMLEQHAIAI CCCEEHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEECCCCCCCCEEECCCEEEC PHCEAIHAKSSAIYLLRPTNKVHFQQADDDNDVEVSLVIALIVENPQQQLKLLRCLFGKL CCCHHHCCCCCEEEEEECCCEEEEEECCCCCCCCHHHEEEEHHCCHHHHHHHHHHHHHCC QQPDIVETLITLPETQLKEYFTKYVLDSDE CCCHHHHHHHHCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure TNLFVRSGISFVDRSEVLTHIGNEMLAKGVVHDTRPQALIAREAEFPTGIMLEQHAIAI CCEEHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEECCCCCCCCEEECCCEEEC PHCEAIHAKSSAIYLLRPTNKVHFQQADDDNDVEVSLVIALIVENPQQQLKLLRCLFGKL CCCHHHCCCCCEEEEEECCCEEEEEECCCCCCCCHHHEEEEHHCCHHHHHHHHHHHHHCC QQPDIVETLITLPETQLKEYFTKYVLDSDE CCCHHHHHHHHCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]