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The map label for this gene is yraM [H]

Identifier: 187732075

GI number: 187732075

Start: 3374035

End: 3376071

Strand: Reverse

Name: yraM [H]

Synonym: SbBS512_E3625

Alternate gene names: 187732075

Gene position: 3376071-3374035 (Counterclockwise)

Preceding gene: 187730313

Following gene: 187731207

Centisome position: 73.14

GC content: 54.25

Gene sequence:

>2037_bases
ATGGTACCCTCAACATTTTCTCGTTTGAAAGCCGCGCGTTGTCTGCCTGTTGTTCTGGCAGCCCTGATTTTCGCCGGTTG
TGGCACCCATACTCTCGATCAGTCCACTGCTTATATGCAGGGCACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGA
TGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGTGCACTGGTGAAAGAAGGTAAAACCAGG
CAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATTCTCAGCGTCGCGAGAAAACACTGCTGGCGGTAGA
GATTAAACTGGCGCAGAAAGATTTTGCTGGCGCGCAAAACTTGCTGGCGAAAATCACACCTGCCGATTTAGAACAAAACC
AGCAAGCGCGTTACTGGCAGGCAAAAATCGATGCCAGCCAGGGGCGTCCTTCCATTGATTTACTGCGCGCGTTAATTGCT
CAGGAACCGCTGCTCGGCGCGAAAGAAAAAAAGCAGAATATTGATGCCACCTGGCAGGCGCTCTCCTCCATGACTCAGGA
ACAGGCGAATACGCTGGTGATCAACGCCGACGAAAATATTCTGCAAGGCTGGCTGGATCTGCAGCGCGTCTGGTTTGATA
ACCGTAACGATCCCGATATGATGAAAGCCGGGATCGCCGACTGGCAGAAACGTTATCCGAACAATCCGGGCGCGAAAATG
CTGCCAACGCAGTTGGTTAACGTAAAAGCGTTTAAACCAGCCTCGACCAACAAAATCGCCCTGCTGTTGCCGCTGAATGG
CCAGGCAGCGGTATTTGGTCGCACTATTCAGCAAGGCTTTGAAGCGGCGAAAAATATCGGCACTCAGCCAGTGGCGGCTC
AGGTAGCTGCCGCACCTGCCGCAGACGTAGCAGAACAACCTCAGCCGCAAACTGCGGATGGCGTTGCCAGCCCGGCACAA
GCCTCGGTTAGCGATCTGACCGGTGATCAGCCTGCGGCCCAGCCGGTGCCTGTAAGCGCCCCGGCGACAAGCACCGCAGC
GGTAAGCGCACCCGCAAATCCATCCGCAGAGCTGAAAATCTACGATACCTCATCACAACCACTTAGCCAGATCTTAAGCC
AGGTTCAGCAGGATGGCGCGAGTATTGTGGTTGGTCCGTTGCTGAAAAATAACGTTGAAGAGTTGCTTAAGAGCAACACC
CCGCTGAACGTGCTGGCACTGAACCAGCCGGAGAATATCGAAAACCGCGTCAATATTTGTTACTTCGCGCTTTCACCGGA
AGACGAAGCGCGCGATGCAGCGCGTCATATTCGTGACCAGGGTAAACAAGCGCCGCTGGTGCTGATCCCACGCAGTTCAT
TGGGCGATCGCGTAGCCAATGCGTTTGCGCAGGAGTGGCAGAAACTGGGCGGCGGCACCGTTCTGCAACAAAAATTTGGT
TCCACCAGCGAATTACGCGCGGGTGTTAACGGCGGTTCTGGTATCGCTTTAACGGGTACCCCGATTACTCCCAGAGCGAC
AACCGACTCCGGCATGACGACCAACAATCCAACGCTGCAAACCACGCCAACCGATGACCAGTTCACCAATAATGGCGGTC
GTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGC
CAGAGCGGTGCAATGCTGTACGCCAGCTCCCGCAGCGCACAAGGCACCGCAGGCCCGGATTTCCGTCTGGAGATGGAAGG
TTTGCAGTACAGCGAAATCCCGATGCTGGCGGGCGGTAATCTGCCGTTAATGCAGCAGGCACTCAGCGCGGTGAATAACG
ATTATTCACTGGCTCGCATGTATGCGATGGGCGTCGATGCCTGGTCGCTGGCAAATCATTTCTCACAAATGCGCCAGGTT
CAGGGTTTTGAAATCAACGGTAATACCGGAAGCCTGACGGCAAACCCGGATTGCGTGATTAACAGGAAGTTATCATGGCT
ACAGTACCAACAAGGTCAGGTAGTCCCCGCCAGTTAA

Upstream 100 bases:

>100_bases
GGCCCTGAGAATTATCCGCCGATTGGTGTTGTTTCATTGTGTCGTCCGTATTGCCGATTTAATATTGAGCATTGCGTAAA
AAAATATCACTGGATACATT

Downstream 100 bases:

>100_bases
CCACCAAACAGACCGGCGATGCGTGGGAAGTACAAGCGCGTCGCTGGCTGGAAGGCAAAGGACTGCGATTTGTCGCCGCT
AACGTGAACGAGCGTGGCGG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 678; Mature: 678

Protein sequence:

>678_residues
MVPSTFSRLKAARCLPVVLAALIFAGCGTHTLDQSTAYMQGTAQADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTR
QAVELFNQLPQELNDSQRREKTLLAVEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIA
QEPLLGAKEKKQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKM
LPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPAADVAEQPQPQTADGVASPAQ
ASVSDLTGDQPAAQPVPVSAPATSTAAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLKSNT
PLNVLALNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKFG
STSELRAGVNGGSGIALTGTPITPRATTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGS
QSGAMLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQV
QGFEINGNTGSLTANPDCVINRKLSWLQYQQGQVVPAS

Sequences:

>Translated_678_residues
MVPSTFSRLKAARCLPVVLAALIFAGCGTHTLDQSTAYMQGTAQADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTR
QAVELFNQLPQELNDSQRREKTLLAVEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIA
QEPLLGAKEKKQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKM
LPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPAADVAEQPQPQTADGVASPAQ
ASVSDLTGDQPAAQPVPVSAPATSTAAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLKSNT
PLNVLALNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKFG
STSELRAGVNGGSGIALTGTPITPRATTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGS
QSGAMLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQV
QGFEINGNTGSLTANPDCVINRKLSWLQYQQGQVVPAS
>Mature_678_residues
MVPSTFSRLKAARCLPVVLAALIFAGCGTHTLDQSTAYMQGTAQADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTR
QAVELFNQLPQELNDSQRREKTLLAVEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIA
QEPLLGAKEKKQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKM
LPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPAADVAEQPQPQTADGVASPAQ
ASVSDLTGDQPAAQPVPVSAPATSTAAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLKSNT
PLNVLALNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKFG
STSELRAGVNGGSGIALTGTPITPRATTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGS
QSGAMLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQV
QGFEINGNTGSLTANPDCVINRKLSWLQYQQGQVVPAS

Specific function: Unknown

COG id: COG3107

COG function: function code R; Putative lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1655 [H]

Homologues:

Organism=Escherichia coli, GI1789537, Length=678, Percent_Identity=98.377581120944, Blast_Score=1354, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007443 [H]

Pfam domain/function: PF04348 LppC [H]

EC number: NA

Molecular weight: Translated: 72929; Mature: 72929

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPSTFSRLKAARCLPVVLAALIFAGCGTHTLDQSTAYMQGTAQADSAFYLQQMQQSSDD
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCC
TRINWQLLAIRALVKEGKTRQAVELFNQLPQELNDSQRREKTLLAVEIKLAQKDFAGAQN
CEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHEEEEEEEEEHHHHHCCHHH
LLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIAQEPLLGAKEKKQNIDATWQA
HHHHCCCHHCCCCCCCHHEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHCCCHHHHHH
LSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKM
HHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
LPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPA
CCHHHEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCC
ADVAEQPQPQTADGVASPAQASVSDLTGDQPAAQPVPVSAPATSTAAVSAPANPSAELKI
HHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEE
YDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLKSNTPLNVLALNQPENIENRVNIC
EECCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEE
YFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKFG
EEEECCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHCC
STSELRAGVNGGSGIALTGTPITPRATTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYI
CHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEE
VATPGEIAFIKPMIAMRNGSQSGAMLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGN
EECCCCEEEHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEECCC
LPLMQQALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQVQGFEINGNTGSLTANPDCVI
CHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCEECCCCEEE
NRKLSWLQYQQGQVVPAS
ECCHHHHHHCCCEEECCC
>Mature Secondary Structure
MVPSTFSRLKAARCLPVVLAALIFAGCGTHTLDQSTAYMQGTAQADSAFYLQQMQQSSDD
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCC
TRINWQLLAIRALVKEGKTRQAVELFNQLPQELNDSQRREKTLLAVEIKLAQKDFAGAQN
CEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHEEEEEEEEEHHHHHCCHHH
LLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIAQEPLLGAKEKKQNIDATWQA
HHHHCCCHHCCCCCCCHHEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHCCCHHHHHH
LSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKM
HHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
LPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPA
CCHHHEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCC
ADVAEQPQPQTADGVASPAQASVSDLTGDQPAAQPVPVSAPATSTAAVSAPANPSAELKI
HHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEE
YDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLKSNTPLNVLALNQPENIENRVNIC
EECCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEE
YFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKFG
EEEECCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHCC
STSELRAGVNGGSGIALTGTPITPRATTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYI
CHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEE
VATPGEIAFIKPMIAMRNGSQSGAMLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGN
EECCCCEEEHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEECCC
LPLMQQALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQVQGFEINGNTGSLTANPDCVI
CHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCEECCCCEEE
NRKLSWLQYQQGQVVPAS
ECCHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]