Click here to switch to the map view.

The map label for this gene is wcaC

Identifier: 187731835

GI number: 187731835

Start: 1078104

End: 1079321

Strand: Direct

Name: wcaC

Synonym: SbBS512_E1175

Alternate gene names: 187731835

Gene position: 1078104-1079321 (Clockwise)

Preceding gene: 187730834

Following gene: 187734147

Centisome position: 23.36

GC content: 53.61

Gene sequence:

>1218_bases
ATGAATATTTTGCAATTTAATGTGCGACTGGCGGAAGGCGGGGCAGCAGGTGTGGCGTTAGATCTCCACCAGCGTGCGCT
GCAACAGGGGCTAGCGTCACATTTTGTCTACGGTTACGGCAAAGGCGGCAAAGAGAGCGTCAGCCATCAAAACTATCCGC
AGGTCATCAAACATACGCCGCGGATGACTGCAATGGCGAATATTGTCCTGTTTCGTCTGTTTAATCGCGATCTGTTTGGC
AATTTCAATGAGTTATATCGCACCATTACTCGTACACCGGGTCCGGTGGTCCTGCATTTTCATGTGCTGCACAGCTACTG
GCTAAATCTTAAGAGCGTGGTGCGCTTTTGCGAAAAGGTGAAAAACCATAAACCGGACGTCACTCTGGTCTGGACGCTGC
ACGACCACTGGAGCGTTACCGGACGCTGCGCCTTTACCGACGGTTGTGAAGGCTGGAAAACGGGCTGCCAGAAATGCCCG
ACCTTAAATAACTATCCGCCGGTGAAGATTGATCGGGCGCACCAGCTGGTGGCGGGCAAACGCCAGTTATTCCGTGAGAT
GCTGGCGCTGGGCTGTCAGTTTATTTCCCCCAGCCAGCATGTGGCTGACGCTTTCAATAGCCTGTACGGTCCAGGGCGTT
GCCGGATTATCAATAATGGTATTGATATGGCAACCGAAGCGATTCTGGCGGATCTGCCTCCGGTGCGCGAAACCCAGGGC
AAGCCGAAAATCGCTGTGGTGGCGCATGACCTGCGTTACGACGGCAAAACTAACCAGCAACTGGTGCGTGAGATGATGGC
GCTGGGCGACAAAATCGAACTGCATACCTTTGGTAAGTTCTCGCCGTTCACCGCTGGCAACGTGGTTAATCACGGCTTTG
AAACCGACAAACGTAAGCTGATGAGCGCGCTCAATCAGATGGATGCGCTGGTATTCAGTTCTCGCGTCGATAACTACCCG
CTGATTTTGTGTGAGGCGCTATCGATTGGCGTGCCGGTGATTGCCACCCATAGCGATGCGGCGCGGGAAGTGTTGCAAAA
ATCCGGCGGTAAAACCGTCAGCGAAGAAGAGGTGCTGCAACTGGTGCAGTTAAGCAAACCGGAAATCGCGCAGGCGATAT
TTGGTACCACGCTGGCTGAGTTCAGCCAACGCAGCCGCGCCGCCTACAGTGGACAACAGATGCTGGAGGAGTATGTCAAC
TTCTATCAGAATCTGTAG

Upstream 100 bases:

>100_bases
TTGGTAACAACGTCACCGTGGGTGCGGGCAGCGTGGTGCTCGACTCTGTCCCGGACAACGCGCTGGTGGTGGGAGAAAAA
GCGCGAGTGAAGGTAATTAA

Downstream 100 bases:

>100_bases
CTACCTGTTGCTGCCGCTGATTTATCTGCTGGTTAACGTCAAAATCGCCCAGCTTGGCGAAAGTTTCCCCATCACCATCG
TCACTTTTTTACCTGTCTTG

Product: putative glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTPRMTAMANIVLFRLFNRDLFG
NFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCP
TLNNYPPVKIDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEAILADLPPVRETQG
KPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYP
LILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEEVLQLVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQQMLEEYVN
FYQNL

Sequences:

>Translated_405_residues
MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTPRMTAMANIVLFRLFNRDLFG
NFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCP
TLNNYPPVKIDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEAILADLPPVRETQG
KPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYP
LILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEEVLQLVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQQMLEEYVN
FYQNL
>Mature_405_residues
MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTPRMTAMANIVLFRLFNRDLFG
NFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCP
TLNNYPPVKIDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEAILADLPPVRETQG
KPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYP
LILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEEVLQLVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQQMLEEYVN
FYQNL

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788370, Length=405, Percent_Identity=99.5061728395062, Blast_Score=846, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 45315; Mature: 45315

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTP
CCEEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHEEECCCCCHHCCCCCCCHHHHHCCC
RMTAMANIVLFRLFNRDLFGNFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
KNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKIDRAHQLVAGK
HCCCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEECHHHHHHHHH
RQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEAILADLPPVRETQG
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCHHCCC
KPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKL
CCEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCCHHHHHH
MSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEEVLQ
HHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCEEEECCHHHHHHHHHCCCCCCCHHHHHH
LVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTP
CCEEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHEEECCCCCHHCCCCCCCHHHHHCCC
RMTAMANIVLFRLFNRDLFGNFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
KNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKIDRAHQLVAGK
HCCCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEECHHHHHHHHH
RQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEAILADLPPVRETQG
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCHHCCC
KPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKL
CCEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCCHHHHHH
MSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEEVLQ
HHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCEEEECCHHHHHHHHHCCCCCCCHHHHHH
LVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759852; 9278503 [H]