Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

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The map label for this gene is yghX [H]

Identifier: 187731686

GI number: 187731686

Start: 3189974

End: 3190411

Strand: Reverse

Name: yghX [H]

Synonym: SbBS512_E3428

Alternate gene names: 187731686

Gene position: 3190411-3189974 (Counterclockwise)

Preceding gene: 187732008

Following gene: 187730110

Centisome position: 69.12

GC content: 52.05

Gene sequence:

>438_bases
ATGCCGCGTTTAACCGCCAAAGATTTCCCACAAGAGTTGTTGGATTACTACGACTATTACGCTCACGGGAAAATTTCGAA
ACGTGAGTTCCTCAACCTTGCGGCGAAGTATGCGGTGGGCGGGATGACGGCATTAGCGTTGTTTGATTTGCTCAAGCCAA
ATTATGCGCTGACGACTCAGGTAGAGTTTACCGACCCGGAGATTGTTGCTGAGTACATCACGTATCCTTCGCCAAATGGT
CACGGCGAGGTACGGGGTTATCTGGTGAAACCCGCAAAAATGAGCGGCAAAACGCCAGCCGTGGTGGTGGTGCATGAGAA
TCGTGGACTGAATCCGTATATCGAAGATGTGGCACGGCGAGTGACGAAGGCGGGGTATATCGCCCTGGCACCTGACGGCT
TAAGTTCCGTTGGAGGGGTAATGCTGCCAACTTACTGA

Upstream 100 bases:

>100_bases
CCAGCGCGTATCCCGTAGTCTGGCTCACAGAGTGACGAAAAACTGGGCAAAAACACGCGCTTATGCTTTGCTTAAAAAAC
ACCAGTTGAGGAATGCAACG

Downstream 100 bases:

>100_bases
TTTAGTGTATGATGGTGATTTTAAGGTGCTTGCGTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGG
CGTGGTGCGTAACGGCAAAA

Product: carboxymethylenebutenolidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MPRLTAKDFPQELLDYYDYYAHGKISKREFLNLAAKYAVGGMTALALFDLLKPNYALTTQVEFTDPEIVAEYITYPSPNG
HGEVRGYLVKPAKMSGKTPAVVVVHENRGLNPYIEDVARRVTKAGYIALAPDGLSSVGGVMLPTY

Sequences:

>Translated_145_residues
MPRLTAKDFPQELLDYYDYYAHGKISKREFLNLAAKYAVGGMTALALFDLLKPNYALTTQVEFTDPEIVAEYITYPSPNG
HGEVRGYLVKPAKMSGKTPAVVVVHENRGLNPYIEDVARRVTKAGYIALAPDGLSSVGGVMLPTY
>Mature_144_residues
PRLTAKDFPQELLDYYDYYAHGKISKREFLNLAAKYAVGGMTALALFDLLKPNYALTTQVEFTDPEIVAEYITYPSPNGH
GEVRGYLVKPAKMSGKTPAVVVVHENRGLNPYIEDVARRVTKAGYIALAPDGLSSVGGVMLPTY

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: NA

Molecular weight: Translated: 15974; Mature: 15842

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLTAKDFPQELLDYYDYYAHGKISKREFLNLAAKYAVGGMTALALFDLLKPNYALTTQ
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEE
VEFTDPEIVAEYITYPSPNGHGEVRGYLVKPAKMSGKTPAVVVVHENRGLNPYIEDVARR
EECCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHH
VTKAGYIALAPDGLSSVGGVMLPTY
HHHCCEEEECCCCCHHCCCEECCCC
>Mature Secondary Structure 
PRLTAKDFPQELLDYYDYYAHGKISKREFLNLAAKYAVGGMTALALFDLLKPNYALTTQ
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEE
VEFTDPEIVAEYITYPSPNGHGEVRGYLVKPAKMSGKTPAVVVVHENRGLNPYIEDVARR
EECCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHH
VTKAGYIALAPDGLSSVGGVMLPTY
HHHCCEEEECCCCCHHCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]