| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
Click here to switch to the map view.
The map label for this gene is degS
Identifier: 187731547
GI number:
Start: 3292775
End: 3293842
Strand: Reverse
Name: degS
Synonym: SbBS512_E3541
Alternate gene names: NA
Gene position: NA
Preceding gene: 187731297
Following gene: 187733662
Centisome position: NA
GC content: NA
Gene sequence:
>1068_bases ATGTTTGTGAAGCTCTTACGTTCCGTTGCGATTGGATTAATTGTCGGCGCTATTCTGCTGGTTGCCATGCCTTCGCTGCG CAGCCTTAACCCGCTTTCCACTCCGCAATTTGACAGTACCGATGAGACGCCTGCCAGCTATAATCTGGCGGTTCGCCGCG CCGCGCCAGCGGTGGTTAACGTTTACAACCGTGGTGTGAACACCAACTCTCACAACCAGCTTGAGATCCGCACCCTGGGA TCCGGTGTAATCATGGATCAACGCGGTTATATCATCACCAATAAACACGTCATCAACGACGCCGATCAGATCATCGTCGC CTTACAGGATGGACGTGTATTTGAAGCATTGCTGGTGGGATCTGACTCTCTAACCGATCTGGCGGTACTTAAAATTAATG CCACTGGCGGTTTACCTACCATTCCAATTAATGCACGTCGCGTACCGCACATTGGCGACGTAGTACTGGCGATCGGTAAC CCGTACAACCTCGGGCAGACCATTACCCAAGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCTACCGGGCGGCA AAACTTCCTACAAACCGATGCTTCCATTAACCACGGTAACTCTGGTGGCGCGCTGGTGAACTCGCTGGGAGAACTGATGG GCATTAACACGCTGTCGTTTGATAAGAGTAACGATGGCGAAACGCCGGAAGGTATCGGCTTTGCGATTCCTTTCCAGTTA GCAACCAAAATTATGGATAAGCTGATCCGCGATGGGCGCGTGATCCGCGGCTACATTGGCATTGGTGGACGTGAGATCGC ACCACTGCACGCGCAGAGCGGTGGTATAGATCAACTGCAAGGGATCGTGGTTAATGAAGTGTCACCTGACGGCCCGGCGG CGAATGCGGGTATTCAGGTCAACGATCTGATTATTTCGGTGGATAACAAACCGGCCATCTCTGCTCTGGAGACGATGGAT CAGGTGGCAGAAATTCGCCCTGGTTCGGTGATCCCGGTTGTAGTGATGCGTGATGATAAGCAGTTAACGCTGCAGGTCAC CATTCAGGAATATCCGGCAACCAATTAA
Upstream 100 bases:
>100_bases TGATGCGTTAATGTCGTAAACCGGGCATCAGGCTTACGTGTGATGTCCGGTTAACTCGTGGTATGCTGCTGCCGTTCCCT TTTTTAATGACGCCTCCATC
Downstream 100 bases:
>100_bases GTCGAGTGCTCAAAACAAAAAACCGGAGTCTGTGCTCCGGTTTTTTATTATTCGCTAATCAATTACTTATTAACGAACTC TTCGCCCAGGGCGATATCTT
Product: serine endoprotease
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>355_residues MFVKLLRSVAIGLIVGAILLVAMPSLRSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGVNTNSHNQLEIRTLG SGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGN PYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQL ATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQSGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMD QVAEIRPGSVIPVVVMRDDKQLTLQVTIQEYPATN
Sequences:
NA
Specific function: NA
COG id: COG0265
COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA