Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

Click here to switch to the map view.

The map label for this gene is fbaB

Identifier: 187731521

GI number: 187731521

Start: 1033045

End: 1034097

Strand: Direct

Name: fbaB

Synonym: SbBS512_E1141

Alternate gene names: 187731521

Gene position: 1033045-1034097 (Clockwise)

Preceding gene: 187733544

Following gene: 187731473

Centisome position: 22.38

GC content: 51.85

Gene sequence:

>1053_bases
ATGACAGATATTGCGCAGTTGCTTGGCAAAGACGCCGACAACCTTTTACAGCACCGTTGTATGACTATTCCTTCTGACCA
GCTTTATCTCCCCGGACATGACTACGTAGACCGCGTGATGATTGACAATAATCGCCCGCCTGCGGTGTTACGTAATATGC
AGACGTTGTACAACACCGGGCGTCTGGCTGGCACAGGATATCTTTCTATTCTGCCGGTTGACCAGGGCGTTGAGCACTCT
GCCGGAGCTTCATTTGCTGCTAACCCGCTCTACTTTGACCCGAAAAACATTGTTGAACTGGCGATCGAAGCGGGCTGTAA
CTGTGTGGCGTCAACTTACGGCGTGCTGGCGTCGGTATCGCGGCGTTATGCGCATCGCATTCCATTCCTCGTCAAACTTA
ATCACAACGAGACGCTAAGTTACCCGAATACCTACGATCAAACGCTGTATGCCAGCGTGGAGCAGGCGTTCAACATGGGC
GCGGTTGCGGTTGGTGCGACTATCTATTTTGGCTCGGAAGAGTCACGTCGCCAGATTGAAGAAATTTCTGCGGCTTTTGA
ACGTGCGCACGAGCTGGGCATGGTGACAGTGCTGTGGGCCTATTTGCGTAACTCCGCCTTTAAGAAAGATGGCGTTGATT
ACCATGTTTCCGCCGACCTGACTGGTCAGGCGAACCATCTGGCGGCGACCATTGGCGCGGACATCGTCAAACAGAAAATG
GCGGAAAATAACGGCGGTTATAAAGCGATTAATTACGGTTATACCGACGATCGCGTGTACAGCAAGTTAACCAGCGAAAA
CCCGATTGATCTGGTGCGTTATCAGTTAGCTAACTGCTATATGGGCCGGGCAGGGTTGATAAACTCCGGCGGTGCTGCAG
GCGGTGAAACTGACCTCAGTGATGCAGTGCGTACTGCGGTTATCAACAAACGCGCTGGCGGAATGGGGCTGATTCTTGGA
CGTAAGGCGTTCAAGAAATCGATGGCTGACGGCGTGAAACTGATTAACGCCGTGCAGGACGTTTATCTCGATAGCAAAAT
TACTATCGCCTGA

Upstream 100 bases:

>100_bases
GAAAAACTCGCCCGTAACGACCAGGATTATGATTGCCCGCAAAAGGCGGGCCAGGAAAATCCATAGCCGATATCCAATCG
GAATTTACGGGAGCATAGTA

Downstream 100 bases:

>100_bases
TACGCCTTATACGAACAACACCACCCCGTAGGACGGATAAGGCGTTTACGCTGCATCCGGCAACCTATGCCTGATGCGAC
GCTGAAGCGTCTTATCATGC

Product: fructose-bisphosphate aldolase

Products: NA

Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHS
AGASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMG
AVAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKM
AENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILG
RKAFKKSMADGVKLINAVQDVYLDSKITIA

Sequences:

>Translated_350_residues
MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHS
AGASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMG
AVAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKM
AENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILG
RKAFKKSMADGVKLINAVQDVYLDSKITIA
>Mature_349_residues
TDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHSA
GASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMGA
VAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKMA
ENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILGR
KAFKKSMADGVKLINAVQDVYLDSKITIA

Specific function: Unknown

COG id: COG1830

COG function: function code G; DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes

Gene ontology:

Cell location: Cytoplasm (Probable)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the deoC/fbaB aldolase family. FbaB subfamily

Homologues:

Organism=Escherichia coli, GI87082042, Length=350, Percent_Identity=100, Blast_Score=723, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ALF1_ECOL6 (P0A992)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_754511.2
- ProteinModelPortal:   P0A992
- SMR:   P0A992
- EnsemblBacteria:   EBESCT00000040875
- GeneID:   1037944
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c2623
- GeneTree:   EBGT00050000010261
- HOGENOM:   HBG553580
- OMA:   YESENPG
- ProtClustDB:   PRK09250
- BRENDA:   4.1.2.13
- GO:   GO:0005737
- GO:   GO:0006096
- InterPro:   IPR013785
- InterPro:   IPR002915
- Gene3D:   G3DSA:3.20.20.70

Pfam domain/function: PF01791 DeoC

EC number: =4.1.2.13

Molecular weight: Translated: 38110; Mature: 37978

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: ACT_SITE 237-237

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTG
CCHHHHHHCCCHHHHHHHHHCCCCCCCEEECCCHHHCEEEECCCCCHHHHHHHHHHHHCC
RLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLASVS
CCCCCCEEEEEECCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHCCCHHHHHHHHHHHHH
RRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMGAVAVGATIYFGSEESRRQIE
HHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHH
EISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
AENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLS
HHCCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
DAVRTAVINKRAGGMGLILGRKAFKKSMADGVKLINAVQDVYLDSKITIA
HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
>Mature Secondary Structure 
TDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTG
CHHHHHHCCCHHHHHHHHHCCCCCCCEEECCCHHHCEEEECCCCCHHHHHHHHHHHHCC
RLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLASVS
CCCCCCEEEEEECCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHCCCHHHHHHHHHHHHH
RRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMGAVAVGATIYFGSEESRRQIE
HHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHH
EISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
AENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLS
HHCCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
DAVRTAVINKRAGGMGLILGRKAFKKSMADGVKLINAVQDVYLDSKITIA
HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157