Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
---|---|
Accession | NC_010658 |
Length | 4,615,997 |
Click here to switch to the map view.
The map label for this gene is fbaB
Identifier: 187731521
GI number: 187731521
Start: 1033045
End: 1034097
Strand: Direct
Name: fbaB
Synonym: SbBS512_E1141
Alternate gene names: 187731521
Gene position: 1033045-1034097 (Clockwise)
Preceding gene: 187733544
Following gene: 187731473
Centisome position: 22.38
GC content: 51.85
Gene sequence:
>1053_bases ATGACAGATATTGCGCAGTTGCTTGGCAAAGACGCCGACAACCTTTTACAGCACCGTTGTATGACTATTCCTTCTGACCA GCTTTATCTCCCCGGACATGACTACGTAGACCGCGTGATGATTGACAATAATCGCCCGCCTGCGGTGTTACGTAATATGC AGACGTTGTACAACACCGGGCGTCTGGCTGGCACAGGATATCTTTCTATTCTGCCGGTTGACCAGGGCGTTGAGCACTCT GCCGGAGCTTCATTTGCTGCTAACCCGCTCTACTTTGACCCGAAAAACATTGTTGAACTGGCGATCGAAGCGGGCTGTAA CTGTGTGGCGTCAACTTACGGCGTGCTGGCGTCGGTATCGCGGCGTTATGCGCATCGCATTCCATTCCTCGTCAAACTTA ATCACAACGAGACGCTAAGTTACCCGAATACCTACGATCAAACGCTGTATGCCAGCGTGGAGCAGGCGTTCAACATGGGC GCGGTTGCGGTTGGTGCGACTATCTATTTTGGCTCGGAAGAGTCACGTCGCCAGATTGAAGAAATTTCTGCGGCTTTTGA ACGTGCGCACGAGCTGGGCATGGTGACAGTGCTGTGGGCCTATTTGCGTAACTCCGCCTTTAAGAAAGATGGCGTTGATT ACCATGTTTCCGCCGACCTGACTGGTCAGGCGAACCATCTGGCGGCGACCATTGGCGCGGACATCGTCAAACAGAAAATG GCGGAAAATAACGGCGGTTATAAAGCGATTAATTACGGTTATACCGACGATCGCGTGTACAGCAAGTTAACCAGCGAAAA CCCGATTGATCTGGTGCGTTATCAGTTAGCTAACTGCTATATGGGCCGGGCAGGGTTGATAAACTCCGGCGGTGCTGCAG GCGGTGAAACTGACCTCAGTGATGCAGTGCGTACTGCGGTTATCAACAAACGCGCTGGCGGAATGGGGCTGATTCTTGGA CGTAAGGCGTTCAAGAAATCGATGGCTGACGGCGTGAAACTGATTAACGCCGTGCAGGACGTTTATCTCGATAGCAAAAT TACTATCGCCTGA
Upstream 100 bases:
>100_bases GAAAAACTCGCCCGTAACGACCAGGATTATGATTGCCCGCAAAAGGCGGGCCAGGAAAATCCATAGCCGATATCCAATCG GAATTTACGGGAGCATAGTA
Downstream 100 bases:
>100_bases TACGCCTTATACGAACAACACCACCCCGTAGGACGGATAAGGCGTTTACGCTGCATCCGGCAACCTATGCCTGATGCGAC GCTGAAGCGTCTTATCATGC
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHS AGASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMG AVAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKM AENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILG RKAFKKSMADGVKLINAVQDVYLDSKITIA
Sequences:
>Translated_350_residues MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHS AGASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMG AVAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKM AENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILG RKAFKKSMADGVKLINAVQDVYLDSKITIA >Mature_349_residues TDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHSA GASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMGA VAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKMA ENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILGR KAFKKSMADGVKLINAVQDVYLDSKITIA
Specific function: Unknown
COG id: COG1830
COG function: function code G; DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the deoC/fbaB aldolase family. FbaB subfamily
Homologues:
Organism=Escherichia coli, GI87082042, Length=350, Percent_Identity=100, Blast_Score=723, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ALF1_ECOL6 (P0A992)
Other databases:
- EMBL: AE014075 - RefSeq: NP_754511.2 - ProteinModelPortal: P0A992 - SMR: P0A992 - EnsemblBacteria: EBESCT00000040875 - GeneID: 1037944 - GenomeReviews: AE014075_GR - KEGG: ecc:c2623 - GeneTree: EBGT00050000010261 - HOGENOM: HBG553580 - OMA: YESENPG - ProtClustDB: PRK09250 - BRENDA: 4.1.2.13 - GO: GO:0005737 - GO: GO:0006096 - InterPro: IPR013785 - InterPro: IPR002915 - Gene3D: G3DSA:3.20.20.70
Pfam domain/function: PF01791 DeoC
EC number: =4.1.2.13
Molecular weight: Translated: 38110; Mature: 37978
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: ACT_SITE 237-237
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTG CCHHHHHHCCCHHHHHHHHHCCCCCCCEEECCCHHHCEEEECCCCCHHHHHHHHHHHHCC RLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLASVS CCCCCCEEEEEECCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHCCCHHHHHHHHHHHHH RRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMGAVAVGATIYFGSEESRRQIE HHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHH EISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH AENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLS HHCCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH DAVRTAVINKRAGGMGLILGRKAFKKSMADGVKLINAVQDVYLDSKITIA HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC >Mature Secondary Structure TDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTG CHHHHHHCCCHHHHHHHHHCCCCCCCEEECCCHHHCEEEECCCCCHHHHHHHHHHHHCC RLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLASVS CCCCCCEEEEEECCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHCCCHHHHHHHHHHHHH RRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMGAVAVGATIYFGSEESRRQIE HHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHH EISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH AENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLS HHCCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH DAVRTAVINKRAGGMGLILGRKAFKKSMADGVKLINAVQDVYLDSKITIA HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157