| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187731407
Identifier: 187731407
GI number: 187731407
Start: 932201
End: 932506
Strand: Direct
Name: 187731407
Synonym: SbBS512_E1007
Alternate gene names: NA
Gene position: 932201-932506 (Clockwise)
Preceding gene: 187733739
Following gene: 187732973
Centisome position: 20.2
GC content: 49.02
Gene sequence:
>306_bases TTGCGGGAATTTATCGACGAAAACTCCGGTGAATTTTTTGTTCAGGTCTGGGGAAATGGAACCAACTTCGACAACACGAT TTTGCGCCGTTCATACGAACGGCAGGGGATCCCCTGCCCGTGGCGTTACTACAACGATCGCGATGTACGCACAATCGTTG AGCTGGGGAAAGCCATAGACTTCGATGCCAGAACGGCTATTCCATTCGAAGGTGAGCGCCATAATGCACTTGATGACGCT CGTTACCAGGCAAAATACGTTTCAGCTATCTGGCAAAAACTGATCCCGAGTCAGGCTGATTTTTAA
Upstream 100 bases:
>100_bases ACCGGGTCGGCGAACTGCTCCCCTGGCGCGTAGCACTGCCGACTGAATAACACATCCCCGTCAATACGGTTCTTGCTGCA CGCTTACTGCACTGTTACAA
Downstream 100 bases:
>100_bases TGTTCAACCCTAATTGCCGCTAACCGTATATAGTTAGCGGCGGTTATGAGATATAGCTATGAGCAGCTTATTTTTAACCG AAGATGAATTGCTAATATTA
Product: exodeoxyribonuclease VIII
Products: NA
Alternate protein names: Exodeoxyribonuclease VIII; Exonuclease Family Protein; Exonuclease Phage Origin; Exodeoxyribonuclease VIII Bacteriophage Origin; Exonuclease; ATP-Dependent; ExoO Exonuclease VIII; Exonuclease RNAse T And DNA Polymerase III; Phage Exodeoxyribonuclease
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MREFIDENSGEFFVQVWGNGTNFDNTILRRSYERQGIPCPWRYYNDRDVRTIVELGKAIDFDARTAIPFEGERHNALDDA RYQAKYVSAIWQKLIPSQADF
Sequences:
>Translated_101_residues MREFIDENSGEFFVQVWGNGTNFDNTILRRSYERQGIPCPWRYYNDRDVRTIVELGKAIDFDARTAIPFEGERHNALDDA RYQAKYVSAIWQKLIPSQADF >Mature_101_residues MREFIDENSGEFFVQVWGNGTNFDNTILRRSYERQGIPCPWRYYNDRDVRTIVELGKAIDFDARTAIPFEGERHNALDDA RYQAKYVSAIWQKLIPSQADF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11911; Mature: 11911
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREFIDENSGEFFVQVWGNGTNFDNTILRRSYERQGIPCPWRYYNDRDVRTIVELGKAID CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC FDARTAIPFEGERHNALDDARYQAKYVSAIWQKLIPSQADF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MREFIDENSGEFFVQVWGNGTNFDNTILRRSYERQGIPCPWRYYNDRDVRTIVELGKAID CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC FDARTAIPFEGERHNALDDARYQAKYVSAIWQKLIPSQADF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA