Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

Click here to switch to the map view.

The map label for this gene is yqgB [H]

Identifier: 187731250

GI number: 187731250

Start: 3139139

End: 3139285

Strand: Reverse

Name: yqgB [H]

Synonym: SbBS512_E3372

Alternate gene names: 187731250

Gene position: 3139285-3139139 (Counterclockwise)

Preceding gene: 187731441

Following gene: 187731827

Centisome position: 68.01

GC content: 39.46

Gene sequence:

>147_bases
GTGCTTAATAATGTTATGAAAAAGAAACCGGTTGCGCAGTTGGAGCGTCAGCATTCACTGCTGGAAAATCCATGTGCTTA
TGGGTTGTTATCGCAGTTCCAGGCTGCGATAGTCGTTAACTGTTTTACACTTAATAAAATAATTTGA

Upstream 100 bases:

>100_bases
AAGAGCTGGTTACAGTTACTGAGGACTGAACAAGGGCGCTCTTGTAAAAACAAGAGTTTTCTCGTGGTTTCGCCGAACTG
TCACACTTACGTTCGGTTAT

Downstream 100 bases:

>100_bases
GGTTCGCTATGTCTGACGACATGTCTATGGGTTTGCCTTCGTCAGCGGGCGAACACGGTGTACTACGCTCCATGCAGGAG
GTTGCAATGAGCTCCCAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 48; Mature: 48

Protein sequence:

>48_residues
MLNNVMKKKPVAQLERQHSLLENPCAYGLLSQFQAAIVVNCFTLNKII

Sequences:

>Translated_48_residues
MLNNVMKKKPVAQLERQHSLLENPCAYGLLSQFQAAIVVNCFTLNKII
>Mature_48_residues
MLNNVMKKKPVAQLERQHSLLENPCAYGLLSQFQAAIVVNCFTLNKII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgB family [H]

Homologues:

Organism=Escherichia coli, GI145693178, Length=43, Percent_Identity=100, Blast_Score=90, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020196
- ProDom:   PD050163 [H]

Pfam domain/function: PF11036 YqgB [H]

EC number: NA

Molecular weight: Translated: 5431; Mature: 5431

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNNVMKKKPVAQLERQHSLLENPCAYGLLSQFQAAIVVNCFTLNKII
CCCCHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNNVMKKKPVAQLERQHSLLENPCAYGLLSQFQAAIVVNCFTLNKII
CCCCHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]