| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is yqiA
Identifier: 187731033
GI number: 187731033
Start: 3220237
End: 3220818
Strand: Reverse
Name: yqiA
Synonym: SbBS512_E3464
Alternate gene names: 187731033
Gene position: 3220818-3220237 (Counterclockwise)
Preceding gene: 187733893
Following gene: 187730460
Centisome position: 69.78
GC content: 53.61
Gene sequence:
>582_bases ATGTCTACGCTTCTTTATTTACACGGTTTCAACAGCTCGCCGCGCTCTGCAAAAGCGAGCTTGTTAAAAAACTGGCTGGC GGAACATCACCCTGACGTTGAGATGATCATTCCGCAGTTGCCGCCGTATCCTTCCGACGCGGCAGAGCTGCTGGAATCCA TTGTCCTGGAACATGGCGGCGATTCGCTGGGTATTGTCGGTTCGTCACTGGGGGGATATTACGCCACCTGGTTGTCACAA TGTTTTATGCTGCCCGCAGTGGTGGTAAACCCGGCGGTGCGCCCGTTTGAACTGCTGACGGACTATCTCGGTCAGAACGA GAACCCCTACACCGGGCAGCAATATGTGCTAGAGTCACGCCATATTTACGATCTTAAAGTCATGCAGATTGACTCGCTGG AAGCGCCGGATTTGATCTGGCTGCTGCAACAGACGGGAGATGAAGTGCTGGATTACCGCCAGGCGGTGGCGTACTACGCT TTCTGCCGCCAGACTGTCATAGAAGGCGGCAACCACGCATTCACGGGCTTCGAAGATTATTTCAACCCGATCGTCGATTT TCTTGGTCTGCACCATCTCTGA
Upstream 100 bases:
>100_bases GGCGTACTCTCGAGTTACATGCTGATGGCACGCTGACCACCGAGGTGCATCGCCTGGCGGACACACGTTTCCAACCTGAT ACCGCTTCAGAAGGCTACTG
Downstream 100 bases:
>100_bases CGATCAACTCGAATTACTAACTTAAACCATGACGCAAACTTATAACGCTGATGCCATTGAGGTACTCACCGGACTTGAGC CGGTTCGCCGCCGTCCGGGG
Product: esterase YqiA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MSTLLYLHGFNSSPRSAKASLLKNWLAEHHPDVEMIIPQLPPYPSDAAELLESIVLEHGGDSLGIVGSSLGGYYATWLSQ CFMLPAVVVNPAVRPFELLTDYLGQNENPYTGQQYVLESRHIYDLKVMQIDSLEAPDLIWLLQQTGDEVLDYRQAVAYYA FCRQTVIEGGNHAFTGFEDYFNPIVDFLGLHHL
Sequences:
>Translated_193_residues MSTLLYLHGFNSSPRSAKASLLKNWLAEHHPDVEMIIPQLPPYPSDAAELLESIVLEHGGDSLGIVGSSLGGYYATWLSQ CFMLPAVVVNPAVRPFELLTDYLGQNENPYTGQQYVLESRHIYDLKVMQIDSLEAPDLIWLLQQTGDEVLDYRQAVAYYA FCRQTVIEGGNHAFTGFEDYFNPIVDFLGLHHL >Mature_192_residues STLLYLHGFNSSPRSAKASLLKNWLAEHHPDVEMIIPQLPPYPSDAAELLESIVLEHGGDSLGIVGSSLGGYYATWLSQC FMLPAVVVNPAVRPFELLTDYLGQNENPYTGQQYVLESRHIYDLKVMQIDSLEAPDLIWLLQQTGDEVLDYRQAVAYYAF CRQTVIEGGNHAFTGFEDYFNPIVDFLGLHHL
Specific function: Displays esterase activity toward palmitoyl-CoA and pNP- butyrate [H]
COG id: COG3150
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789409, Length=193, Percent_Identity=98.9637305699482, Blast_Score=393, Evalue=1e-111,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008886 [H]
Pfam domain/function: PF05728 UPF0227 [H]
EC number: NA
Molecular weight: Translated: 21692; Mature: 21561
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLLYLHGFNSSPRSAKASLLKNWLAEHHPDVEMIIPQLPPYPSDAAELLESIVLEHGG CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHCCC DSLGIVGSSLGGYYATWLSQCFMLPAVVVNPAVRPFELLTDYLGQNENPYTGQQYVLESR CCEEEHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCC HIYDLKVMQIDSLEAPDLIWLLQQTGDEVLDYRQAVAYYAFCRQTVIEGGNHAFTGFEDY CEEEEEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH FNPIVDFLGLHHL HHHHHHHHHHCCC >Mature Secondary Structure STLLYLHGFNSSPRSAKASLLKNWLAEHHPDVEMIIPQLPPYPSDAAELLESIVLEHGG CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHCCC DSLGIVGSSLGGYYATWLSQCFMLPAVVVNPAVRPFELLTDYLGQNENPYTGQQYVLESR CCEEEHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCC HIYDLKVMQIDSLEAPDLIWLLQQTGDEVLDYRQAVAYYAFCRQTVIEGGNHAFTGFEDY CEEEEEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH FNPIVDFLGLHHL HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]