| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187730829
Identifier: 187730829
GI number: 187730829
Start: 986061
End: 986435
Strand: Direct
Name: 187730829
Synonym: SbBS512_E1084
Alternate gene names: NA
Gene position: 986061-986435 (Clockwise)
Preceding gene: 187730365
Following gene: 187731588
Centisome position: 21.36
GC content: 57.87
Gene sequence:
>375_bases ATGAAAAAGGATCTGAAAACGCTGGCGCTGGCCAGACTGTCAGGGTTTCGTCATAAAACGGTGAAGGTGCCGGAATGGGG GAATGTCAGCGTGGTGCTGCGGGAGCCTTCGGCAGAGGCCTGGTATCTGTGGCAGGAAGTGCTCAATGGTGATGGAGAGG ATGACGATACCCTGTCGGTGGTGGCGAAAACCCGCCGTAACCTGGAAGCGGATGTGACGCTGTTCTGCGATGTCCTGTGT GATACGGACCTGCAGCGGGTGTTCACTCCGGACGACCGTGAGCAGGTGCTGGCCGTCTATGGTCCGGTACATGCCCGGTT GCTGCGTCAGGCACTGGAACTGATCGCTGATGCAGAGTCGGCCAGAAAAAAGTAG
Upstream 100 bases:
>100_bases CCTGCGTGGTGACCGATTCGGCAGAGAAAGCACAGAGTGTGACGTCTGTTGAATGCACCGTGACAGTGAGCGCAGCTGCC GGATAAGGGGATGGGTCATC
Downstream 100 bases:
>100_bases CCCGCCCGGAAATTCGCTTTCTGATGCGACTTGCGCTCCGTCTGGGGCGCACCTTATCCGAACTGCGCCACAGCCTGAGT GCGAGCGAGGCGATGATGTG
Product: phage tail assembly chaperone
Products: NA
Alternate protein names: Tail Assembly Protein In Prophage; Phage Tail Assembly Chaperone
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MKKDLKTLALARLSGFRHKTVKVPEWGNVSVVLREPSAEAWYLWQEVLNGDGEDDDTLSVVAKTRRNLEADVTLFCDVLC DTDLQRVFTPDDREQVLAVYGPVHARLLRQALELIADAESARKK
Sequences:
>Translated_124_residues MKKDLKTLALARLSGFRHKTVKVPEWGNVSVVLREPSAEAWYLWQEVLNGDGEDDDTLSVVAKTRRNLEADVTLFCDVLC DTDLQRVFTPDDREQVLAVYGPVHARLLRQALELIADAESARKK >Mature_124_residues MKKDLKTLALARLSGFRHKTVKVPEWGNVSVVLREPSAEAWYLWQEVLNGDGEDDDTLSVVAKTRRNLEADVTLFCDVLC DTDLQRVFTPDDREQVLAVYGPVHARLLRQALELIADAESARKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14036; Mature: 14036
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKDLKTLALARLSGFRHKTVKVPEWGNVSVVLREPSAEAWYLWQEVLNGDGEDDDTLSV CCCHHHHHHHHHHCCCCCCEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHH VAKTRRNLEADVTLFCDVLCDTDLQRVFTPDDREQVLAVYGPVHARLLRQALELIADAES HHHHHHCCCCCHHHHHHHHHCCCHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHH ARKK HCCC >Mature Secondary Structure MKKDLKTLALARLSGFRHKTVKVPEWGNVSVVLREPSAEAWYLWQEVLNGDGEDDDTLSV CCCHHHHHHHHHHCCCCCCEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHH VAKTRRNLEADVTLFCDVLCDTDLQRVFTPDDREQVLAVYGPVHARLLRQALELIADAES HHHHHHCCCCCHHHHHHHHHCCCHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHH ARKK HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA