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The map label for this gene is rbsA

Identifier: 187730802

GI number: 187730802

Start: 3067194

End: 3067757

Strand: Reverse

Name: rbsA

Synonym: SbBS512_E3293

Alternate gene names: 187730802

Gene position: 3067757-3067194 (Counterclockwise)

Preceding gene: 187733254

Following gene: 187733020

Centisome position: 66.46

GC content: 46.45

Gene sequence:

>564_bases
GTGTTGATTGATGGTAAGGAAGTCAGGATCACTAATCCTAAACAGGCTATTGATCATGGCATTGCTTTTGTGACCGAAAA
CCGCAAGGAAGAAGGGTTAGTGCTGATGCACGACGTCAATATGAACACGCACCATGTGGCGTTTCAATATAACGCTTCGC
GGATGGGACTCATCAATCACCGACAAGAAGAGGCGAAGACGCTGCAATCAATTGCCAGAATGAACACTAAAGTGAGTTCT
GTACATCAGGCAGTGGGAGCGCTGAGCGGCGGTAATCAACAGAAAATCGTGTTATCGAAGTGGCTGGAGAAAACTCCGCG
TATTTTATTGCTCGATGAGCCAACGCGCGGAGTGGATGTCGGCGCAAAATTTGAAATCTATAACGTGATACGTCAACTGG
CTGCGGCAGGGACAGCAATTATTCTGGTGTCCTCTGAACTGCCAGAAGTCATGGCACTTAGCGATCGTCTGGTGGTAATG
CGTAATAAAACGATTGCCGATATTTATTCATGTGAAAATTTAACGCAGACACAGGTAATGACCGCTGCAACAGGAGTACG
TTAA

Upstream 100 bases:

>100_bases
GTCACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAG
TTGGAGTCATTACCGGGACT

Downstream 100 bases:

>100_bases
ATGACAGAGAAAACTCTTGCCAGTCCGAAACCTTCGGAAATTCCCATTGCAAATAATTTTAAAAAAGTCTTCAGGCAATA
TGGCGGTATCCTCAGTGGAA

Product: D-ribose ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MLIDGKEVRITNPKQAIDHGIAFVTENRKEEGLVLMHDVNMNTHHVAFQYNASRMGLINHRQEEAKTLQSIARMNTKVSS
VHQAVGALSGGNQQKIVLSKWLEKTPRILLLDEPTRGVDVGAKFEIYNVIRQLAAAGTAIILVSSELPEVMALSDRLVVM
RNKTIADIYSCENLTQTQVMTAATGVR

Sequences:

>Translated_187_residues
MLIDGKEVRITNPKQAIDHGIAFVTENRKEEGLVLMHDVNMNTHHVAFQYNASRMGLINHRQEEAKTLQSIARMNTKVSS
VHQAVGALSGGNQQKIVLSKWLEKTPRILLLDEPTRGVDVGAKFEIYNVIRQLAAAGTAIILVSSELPEVMALSDRLVVM
RNKTIADIYSCENLTQTQVMTAATGVR
>Mature_187_residues
MLIDGKEVRITNPKQAIDHGIAFVTENRKEEGLVLMHDVNMNTHHVAFQYNASRMGLINHRQEEAKTLQSIARMNTKVSS
VHQAVGALSGGNQQKIVLSKWLEKTPRILLLDEPTRGVDVGAKFEIYNVIRQLAAAGTAIILVSSELPEVMALSDRLVVM
RNKTIADIYSCENLTQTQVMTAATGVR

Specific function: Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Escherichia coli, GI1790190, Length=183, Percent_Identity=44.2622950819672, Blast_Score=162, Evalue=1e-41,
Organism=Escherichia coli, GI1789991, Length=183, Percent_Identity=47.5409836065574, Blast_Score=162, Evalue=1e-41,
Organism=Escherichia coli, GI1788472, Length=180, Percent_Identity=39.4444444444444, Blast_Score=154, Evalue=5e-39,
Organism=Escherichia coli, GI1788210, Length=181, Percent_Identity=41.9889502762431, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1790525, Length=185, Percent_Identity=35.6756756756757, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI48995001, Length=182, Percent_Identity=38.4615384615385, Blast_Score=124, Evalue=3e-30,
Organism=Escherichia coli, GI1788897, Length=169, Percent_Identity=35.5029585798817, Blast_Score=116, Evalue=8e-28,
Organism=Escherichia coli, GI1787792, Length=166, Percent_Identity=36.144578313253, Blast_Score=109, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR013455
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: =3.6.3.17 [H]

Molecular weight: Translated: 20704; Mature: 20704

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIDGKEVRITNPKQAIDHGIAFVTENRKEEGLVLMHDVNMNTHHVAFQYNASRMGLINH
CCCCCCEEEECCHHHHHHCCEEEEECCCCCCCEEEEEECCCCCEEEEEEECCCEECCHHC
RQEEAKTLQSIARMNTKVSSVHQAVGALSGGNQQKIVLSKWLEKTPRILLLDEPTRGVDV
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCC
GAKFEIYNVIRQLAAAGTAIILVSSELPEVMALSDRLVVMRNKTIADIYSCENLTQTQVM
CCCHHHHHHHHHHHHCCEEEEEEECCCCHHHHHCCCEEEEECCCHHHHHHCCCCCHHHHH
TAATGVR
HHHCCCC
>Mature Secondary Structure
MLIDGKEVRITNPKQAIDHGIAFVTENRKEEGLVLMHDVNMNTHHVAFQYNASRMGLINH
CCCCCCEEEECCHHHHHHCCEEEEECCCCCCCEEEEEECCCCCEEEEEEECCCEECCHHC
RQEEAKTLQSIARMNTKVSSVHQAVGALSGGNQQKIVLSKWLEKTPRILLLDEPTRGVDV
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCC
GAKFEIYNVIRQLAAAGTAIILVSSELPEVMALSDRLVVMRNKTIADIYSCENLTQTQVM
CCCHHHHHHHHHHHHCCEEEEEEECCCCHHHHHCCCEEEEECCCHHHHHHCCCCCHHHHH
TAATGVR
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA