| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is fliQ
Identifier: 187730771
GI number: 187730771
Start: 977299
End: 977568
Strand: Direct
Name: fliQ
Synonym: SbBS512_E1070
Alternate gene names: 187730771
Gene position: 977299-977568 (Clockwise)
Preceding gene: 187730211
Following gene: 187733359
Centisome position: 21.17
GC content: 51.11
Gene sequence:
>270_bases ATGACACCTGAATCGGTCATGATGATGGGGACTGAAGCGATGAAAGTCGTGCTGGCACTGGCTGCCCCGCTGTTGCTGGT GGCGCTGGTCACGGGCCTTATCATCAGTATTTTGCAGGCCGCCACGCAGATCAACGAAATGACGCTGTCGTTTATTCCAA AAATCATCGCCGTATTTATTGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTG TTCACTAACCTGCCGTATATCATCGGGTAG
Upstream 100 bases:
>100_bases CATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACTGGTGGATGGCTGGCAATTGCTGGTCGGTTCGCTGGCGCAGAGCT TTTACAGCTAGAGAGGCAAA
Downstream 100 bases:
>100_bases GCCGTACAATGATGCAGGTGACAAGCGATCAATGGCTTTCCTGGTTAAGCCTGTACTTCTGGCCGTTACTGCGCGTGCTG GCGCTCATTTCTACCGCACC
Product: flagellar biosynthesis protein FliQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MTPESVMMMGTEAMKVVLALAAPLLLVALVTGLIISILQAATQINEMTLSFIPKIIAVFIAIIIAGPWMLNLLLDYVRTL FTNLPYIIG
Sequences:
>Translated_89_residues MTPESVMMMGTEAMKVVLALAAPLLLVALVTGLIISILQAATQINEMTLSFIPKIIAVFIAIIIAGPWMLNLLLDYVRTL FTNLPYIIG >Mature_88_residues TPESVMMMGTEAMKVVLALAAPLLLVALVTGLIISILQAATQINEMTLSFIPKIIAVFIAIIIAGPWMLNLLLDYVRTLF TNLPYIIG
Specific function: Required for the assembly of the rivet at the earliest stage of flagellar biosynthesis [H]
COG id: COG1987
COG function: function code NU; Flagellar biosynthesis pathway, component FliQ
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FliQ/MopD/SpaQ family [H]
Homologues:
Organism=Escherichia coli, GI1788260, Length=89, Percent_Identity=98.876404494382, Blast_Score=169, Evalue=3e-44,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002191 - InterPro: IPR006305 [H]
Pfam domain/function: PF01313 Bac_export_3 [H]
EC number: NA
Molecular weight: Translated: 9660; Mature: 9529
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.9 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.8 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPESVMMMGTEAMKVVLALAAPLLLVALVTGLIISILQAATQINEMTLSFIPKIIAVFI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIIIAGPWMLNLLLDYVRTLFTNLPYIIG HHHHHHHHHHHHHHHHHHHHHHCCCHHCC >Mature Secondary Structure TPESVMMMGTEAMKVVLALAAPLLLVALVTGLIISILQAATQINEMTLSFIPKIIAVFI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIIIAGPWMLNLLLDYVRTLFTNLPYIIG HHHHHHHHHHHHHHHHHHHHHHCCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]