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The map label for this gene is yhaK [H]

Identifier: 187730382

GI number: 187730382

Start: 3032890

End: 3033591

Strand: Reverse

Name: yhaK [H]

Synonym: SbBS512_E3251

Alternate gene names: 187730382

Gene position: 3033591-3032890 (Counterclockwise)

Preceding gene: 187733112

Following gene: 187730039

Centisome position: 65.72

GC content: 53.28

Gene sequence:

>702_bases
ATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGG
ACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGTGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCT
TTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGACAGCGAAGGC
AATCATGTTCAGGCCAGCGCCGGTGAGGCGTTGCTGCTCTCTACCCAGCCGGGTGTCAGCTACAGCGAACACAATCTCAG
CAAAGACAAACCGTTAACACGAATGCAGCTTTGGCTGGACGCCTGCCCGCAGCGAGAGAATCCGCTGATTCAAAAACTGG
CGCTTAATATGGGCAAGCAGCAATTAATCGCCTCGCCAGAGGGTACGATGGGAAGCCTGCAATTACGCCAGCAAGTGTGG
CTGCACCATATCGTGCTCGACAAAGGCGAAAGTGCGAATTTCCAGTTGCATGGGCCACGCGCGTATTTGCAATCGATTCA
CGGGAAATTTCATGCGCTTACGCATCATGAAGAGAAAGCGGCGCTGACCTGCGGTGATGGGGCGTTTATTCGTGACGAGG
CTAACATTACGCTGGTTGCCGATTCCCCACTGCGCGCTTTGCTGATAGATTTGCCTGTCTAG

Upstream 100 bases:

>100_bases
TTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAA
GTAAAGAGAGGTCAAGAATT

Downstream 100 bases:

>100_bases
TTGTTTTTACAGGGAGATGATGATGAGTAAAAAATCGGCCAAAAAGCGCCAGCCAGTGAAGCCCGTGGTGGCGAAAGAAC
CTGCTCGCACCGCCAAAAAT

Product: pirin family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEG
NHVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLDACPQRENPLIQKLALNMGKQQLIASPEGTMGSLQLRQQVW
LHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITLVADSPLRALLIDLPV

Sequences:

>Translated_233_residues
MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEG
NHVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLDACPQRENPLIQKLALNMGKQQLIASPEGTMGSLQLRQQVW
LHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITLVADSPLRALLIDLPV
>Mature_233_residues
MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEG
NHVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLDACPQRENPLIQKLALNMGKQQLIASPEGTMGSLQLRQQVW
LHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITLVADSPLRALLIDLPV

Specific function: Does not have quercetin 2,3-dioxygenase activity [H]

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Escherichia coli, GI1789493, Length=233, Percent_Identity=99.5708154506438, Blast_Score=483, Evalue=1e-138,
Organism=Escherichia coli, GI1789847, Length=234, Percent_Identity=34.1880341880342, Blast_Score=134, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin [H]

EC number: NA

Molecular weight: Translated: 25926; Mature: 25926

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLNQEVLAPGAAFQPRTYP
CCCCCCHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
KVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLD
CCEEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
ACPQRENPLIQKLALNMGKQQLIASPEGTMGSLQLRQQVWLHHIVLDKGESANFQLHGPR
HCCCCCCHHHHHHHHHCCHHHEECCCCCCCHHHHHHHHHHHHHHEEECCCCCCEEEECHH
AYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITLVADSPLRALLIDLPV
HHHHHHCCHHEEEECCCCCCEEEECCCCEEECCCCEEEEECCCCEEEEEECCC
>Mature Secondary Structure
MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLNQEVLAPGAAFQPRTYP
CCCCCCHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
KVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLD
CCEEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
ACPQRENPLIQKLALNMGKQQLIASPEGTMGSLQLRQQVWLHHIVLDKGESANFQLHGPR
HCCCCCCHHHHHHHHHCCHHHEECCCCCCCHHHHHHHHHHHHHHEEECCCCCCEEEECHH
AYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITLVADSPLRALLIDLPV
HHHHHHCCHHEEEECCCCCCEEEECCCCEEECCCCEEEEECCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]