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The map label for this gene is 187730287

Identifier: 187730287

GI number: 187730287

Start: 1148982

End: 1149830

Strand: Direct

Name: 187730287

Synonym: SbBS512_E1251

Alternate gene names: NA

Gene position: 1148982-1149830 (Clockwise)

Preceding gene: 187732840

Following gene: 187730624

Centisome position: 24.89

GC content: 49.47

Gene sequence:

>849_bases
ATGATCATTTCAAGACCAAATATTGATTCTGCAATTTCGGGACGTTACACTGTCTCCGCACCTTATAAAGCGGGTGCCGG
GATTGGCGTCCTGAAATTCGCACATGCGCATAACCGCGCTTCAGCGGTTTTTTTGCGCACGTTTCCTCACATCCAAATTA
TGGTGGGGCGTGCAGGGGCATCGAAAGATGCGCCGGGGTCATGTGCGACCGGTTACGCCAACCCTGTACGTCTCACCACC
TCTGTGATTGGCGTCCCATGTGGTGAGTTTTCAAAATTCGCACATGAGGATGTCACTATGGCAACCACCCCTACCCAAAC
TCACCCTAAAATTGATGTTATCCATGGGAAGGCTGTTACCTCTTCTTTGGCCGTTGCCGAATATTTCTGCAAGCAGCACA
AAAACGTTATTCAAAAAATCCAGACGCTTGAGTGCTCTGTTGAATTCACTGAGCTGAATTTTCAGCCCAGTGATTACACC
GATTGCACAGGCCGCAAACTACCTTGCTATCAAATCACCCGCGATGGCTTCGCGTTCCTTGCTATGGGCTTTACTGGCAA
ACGTGCAGCCCGGTTCAAAGAGGCATACATCAACGCCTTTAACCAGATGGAGAAGAATTTATCTGGTGCTGACGCGGTTG
ATATGTCAGCTGTCGCACGAAACGCCAGAGGCGTATACCTGCATTTGCGTGAAATCCATCAAATCTGGACAAGCCAGCTT
TATCCAATGCTTAAGGCCGTTGAATCTCCGCTGGCTAGCAAACTGTACGACCGTGTTGGTGATGCTGTTTTTGGCGCTGC
ACTTGTTGATTCCAGGCTGAATGGTTCTGACAAGGAGGTTCGCCCATGA

Upstream 100 bases:

>100_bases
CGGGAGTAACCCGGCTCACTCAACATCAATAACGGGGAGCTGTTTCGCATAAAACGGCTCCGAAACATCCAAGAACAGTT
CTAAAGATATCAGCAGCTAT

Downstream 100 bases:

>100_bases
TTAGTTACGAAATCATCATCTCCACTACGGAATACAGAAACGATGTATCAGTTCGCACGGATGTATCTGTCTGGCACCGT
CGCTATAAATCCAGAAAAAC

Product: putative phage regulatory protein, Rha family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MIISRPNIDSAISGRYTVSAPYKAGAGIGVLKFAHAHNRASAVFLRTFPHIQIMVGRAGASKDAPGSCATGYANPVRLTT
SVIGVPCGEFSKFAHEDVTMATTPTQTHPKIDVIHGKAVTSSLAVAEYFCKQHKNVIQKIQTLECSVEFTELNFQPSDYT
DCTGRKLPCYQITRDGFAFLAMGFTGKRAARFKEAYINAFNQMEKNLSGADAVDMSAVARNARGVYLHLREIHQIWTSQL
YPMLKAVESPLASKLYDRVGDAVFGAALVDSRLNGSDKEVRP

Sequences:

>Translated_282_residues
MIISRPNIDSAISGRYTVSAPYKAGAGIGVLKFAHAHNRASAVFLRTFPHIQIMVGRAGASKDAPGSCATGYANPVRLTT
SVIGVPCGEFSKFAHEDVTMATTPTQTHPKIDVIHGKAVTSSLAVAEYFCKQHKNVIQKIQTLECSVEFTELNFQPSDYT
DCTGRKLPCYQITRDGFAFLAMGFTGKRAARFKEAYINAFNQMEKNLSGADAVDMSAVARNARGVYLHLREIHQIWTSQL
YPMLKAVESPLASKLYDRVGDAVFGAALVDSRLNGSDKEVRP
>Mature_282_residues
MIISRPNIDSAISGRYTVSAPYKAGAGIGVLKFAHAHNRASAVFLRTFPHIQIMVGRAGASKDAPGSCATGYANPVRLTT
SVIGVPCGEFSKFAHEDVTMATTPTQTHPKIDVIHGKAVTSSLAVAEYFCKQHKNVIQKIQTLECSVEFTELNFQPSDYT
DCTGRKLPCYQITRDGFAFLAMGFTGKRAARFKEAYINAFNQMEKNLSGADAVDMSAVARNARGVYLHLREIHQIWTSQL
YPMLKAVESPLASKLYDRVGDAVFGAALVDSRLNGSDKEVRP

Specific function: Unknown

COG id: COG3646

COG function: function code S; Uncharacterized phage-encoded protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018877
- InterPro:   IPR014054
- InterPro:   IPR019104 [H]

Pfam domain/function: PF10549 ORF11CD3; PF09669 Phage_pRha [H]

EC number: NA

Molecular weight: Translated: 30754; Mature: 30754

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIISRPNIDSAISGRYTVSAPYKAGAGIGVLKFAHAHNRASAVFLRTFPHIQIMVGRAGA
CCCCCCCCCHHHCCCEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEECCCEEEEEECCCC
SKDAPGSCATGYANPVRLTTSVIGVPCGEFSKFAHEDVTMATTPTQTHPKIDVIHGKAVT
CCCCCCCCCCCCCCCEEEEEHHEECCCHHHHHHHHCCEEEEECCCCCCCCEEEEECHHHH
SSLAVAEYFCKQHKNVIQKIQTLECSVEFTELNFQPSDYTDCTGRKLPCYQITRDGFAFL
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCEEEE
AMGFTGKRAARFKEAYINAFNQMEKNLSGADAVDMSAVARNARGVYLHLREIHQIWTSQL
EECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHH
YPMLKAVESPLASKLYDRVGDAVFGAALVDSRLNGSDKEVRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIISRPNIDSAISGRYTVSAPYKAGAGIGVLKFAHAHNRASAVFLRTFPHIQIMVGRAGA
CCCCCCCCCHHHCCCEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEECCCEEEEEECCCC
SKDAPGSCATGYANPVRLTTSVIGVPCGEFSKFAHEDVTMATTPTQTHPKIDVIHGKAVT
CCCCCCCCCCCCCCCEEEEEHHEECCCHHHHHHHHCCEEEEECCCCCCCCEEEEECHHHH
SSLAVAEYFCKQHKNVIQKIQTLECSVEFTELNFQPSDYTDCTGRKLPCYQITRDGFAFL
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCEEEE
AMGFTGKRAARFKEAYINAFNQMEKNLSGADAVDMSAVARNARGVYLHLREIHQIWTSQL
EECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHH
YPMLKAVESPLASKLYDRVGDAVFGAALVDSRLNGSDKEVRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]