Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

Click here to switch to the map view.

The map label for this gene is 187730101

Identifier: 187730101

GI number: 187730101

Start: 993648

End: 994391

Strand: Direct

Name: 187730101

Synonym: SbBS512_E1091

Alternate gene names: NA

Gene position: 993648-994391 (Clockwise)

Preceding gene: 187733869

Following gene: 187730571

Centisome position: 21.53

GC content: 58.33

Gene sequence:

>744_bases
ATGACACAGACTGAATCAGCGATTCTGGCGCATGCCCGGCGGTGTGCGCCTGCGGAGTCGTGCGGCTTCGTGATAAGCAC
GCCGGAGGGGGAGCGGTATATCCCTTGTGTGAATATTTCTGCAGAGCCGGAGGCGTATTTTCGTATCGCACCGGAAGACT
GGCTGCGGGCAGAGATGCAGGGGGAGATTGTGGCACTGGTCCACAGTCATCCCGGTGAGCTGCCCTGGCTGAGCGAGGCT
GACCGGCGGCTGCAGATAAAAAGCGCACTGCCCTGGTGGCTGGTCTGCCGGGGGGAAATTCATAAATTCCGCTGTGTGCC
ACATCTGACAGGACGGCGCTTTGAGCACGGGGTGACGGACTGTTACACGCTGTTCCGGGATGCATACCATCTGGCGGGAA
TTGATATGCCGGATTTTCATCGCGAGGATGACTGGTGGCGCAACGGCCAGAACCTGTACCTGGACAATATGGCGGTCACC
GGCTTTTACCGGGTGCCCCTGTCCTCTGCACAGCCGGGCGATATTCTGCTGTGCTGCTTTGGTGCTTCGGTACCGAACCA
TGCCACCATTTACTGCGGCAACGGTGAGCTGCTTCACCATCTGCCTGAACAACTGAGTAAACGGGAGAGGTATTCCGAAA
AATGGCAACGACGAACGCATTCTGTCTGGCGTCACCGCCACTGGCACGCATCTGCCTTCACGGGGATTTACAACGATTTG
GCCGCCGCCTCAGCCTGTATGTGA

Upstream 100 bases:

>100_bases
AGATGCAGCAAGTGCATGCGCGGGTGTGAACTGCGCAGGAATGTCGGCAATTTTGGCGGTTTCCTTTCCATTAATAAACT
TTCGCAGTAAATCCCGGTTT

Downstream 100 bases:

>100_bases
ACACGGCAGCGGAAGCCATTCGCGCCCTGTCGATGCAGATGCCGGGCTTTCGCCGTCAGATGAACGAAGGCTGGTACCAG
ATACGTATTGCCGGTGATGA

Product: tail assembly protein

Products: NA

Alternate protein names: Tail Assembly Protein; Tail Assembly Protein K; Phage Minor Tail Protein; Phage Tail Assembly Protein; Prophage LambdaSo Tail Assembly Protein K; Phage Protein; Gifsy-2 Prophage Tail Assembly Protein; Phage-Related Tail Assembly Protein K; Tail Assembly Protein K-Like; Tail Fiber Component; NlpC/P60 Family Protein; Bacteriophage Tail Protein; Tail Fiber Component K Of Prophage; Phage Tail Protein; Metal-Dependent Protease; Tail Fiber Component K

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MTQTESAILAHARRCAPAESCGFVISTPEGERYIPCVNISAEPEAYFRIAPEDWLRAEMQGEIVALVHSHPGELPWLSEA
DRRLQIKSALPWWLVCRGEIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIDMPDFHREDDWWRNGQNLYLDNMAVT
GFYRVPLSSAQPGDILLCCFGASVPNHATIYCGNGELLHHLPEQLSKRERYSEKWQRRTHSVWRHRHWHASAFTGIYNDL
AAASACM

Sequences:

>Translated_247_residues
MTQTESAILAHARRCAPAESCGFVISTPEGERYIPCVNISAEPEAYFRIAPEDWLRAEMQGEIVALVHSHPGELPWLSEA
DRRLQIKSALPWWLVCRGEIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIDMPDFHREDDWWRNGQNLYLDNMAVT
GFYRVPLSSAQPGDILLCCFGASVPNHATIYCGNGELLHHLPEQLSKRERYSEKWQRRTHSVWRHRHWHASAFTGIYNDL
AAASACM
>Mature_246_residues
TQTESAILAHARRCAPAESCGFVISTPEGERYIPCVNISAEPEAYFRIAPEDWLRAEMQGEIVALVHSHPGELPWLSEAD
RRLQIKSALPWWLVCRGEIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIDMPDFHREDDWWRNGQNLYLDNMAVTG
FYRVPLSSAQPGDILLCCFGASVPNHATIYCGNGELLHHLPEQLSKRERYSEKWQRRTHSVWRHRHWHASAFTGIYNDLA
AASACM

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28373; Mature: 28242

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTESAILAHARRCAPAESCGFVISTPEGERYIPCVNISAEPEAYFRIAPEDWLRAEMQ
CCCCHHHHHHHHHHCCCHHHCCEEEECCCCCEEEEEEECCCCCCEEEEECCHHHHHHHHC
GEIVALVHSHPGELPWLSEADRRLQIKSALPWWLVCRGEIHKFRCVPHLTGRRFEHGVTD
CCEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEECCCCCCCCHHCCHHH
CYTLFRDAYHLAGIDMPDFHREDDWWRNGQNLYLDNMAVTGFYRVPLSSAQPGDILLCCF
HHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEEECEEEEEEEECCCCCCCCCCEEEEEE
GASVPNHATIYCGNGELLHHLPEQLSKRERYSEKWQRRTHSVWRHRHWHASAFTGIYNDL
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AAASACM
HHHHHCC
>Mature Secondary Structure 
TQTESAILAHARRCAPAESCGFVISTPEGERYIPCVNISAEPEAYFRIAPEDWLRAEMQ
CCCHHHHHHHHHHCCCHHHCCEEEECCCCCEEEEEEECCCCCCEEEEECCHHHHHHHHC
GEIVALVHSHPGELPWLSEADRRLQIKSALPWWLVCRGEIHKFRCVPHLTGRRFEHGVTD
CCEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEECCCCCCCCHHCCHHH
CYTLFRDAYHLAGIDMPDFHREDDWWRNGQNLYLDNMAVTGFYRVPLSSAQPGDILLCCF
HHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEEECEEEEEEEECCCCCCCCCCEEEEEE
GASVPNHATIYCGNGELLHHLPEQLSKRERYSEKWQRRTHSVWRHRHWHASAFTGIYNDL
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AAASACM
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA