Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010622 |
Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is panC
Identifier: 186476948
GI number: 186476948
Start: 2472125
End: 2472958
Strand: Direct
Name: panC
Synonym: Bphy_2197
Alternate gene names: 186476948
Gene position: 2472125-2472958 (Clockwise)
Preceding gene: 186476947
Following gene: 186476949
Centisome position: 71.05
GC content: 64.15
Gene sequence:
>834_bases ATGAAAGTCATCAGTTCGATCCAGGAATTGCGCGATCAGTTGCGCGGCCAGAACCGCACCGCCTTCGTGCCGACGATGGG TAACCTGCACGAGGGCCATCTGTCGCTGATGCGCCTCGCGCGCCAGCACGGCGACCCGGTCGTGGCGAGCATCTTCGTGA ACCGGCTGCAGTTCGGCCCGAACGAAGACTTCGACAAATACCCGCGCACACTCGAAGCGGACATCGAGAAGCTGCAGAAG GAAAACGTCTACGTGCTGTTCGCGCCGACGGAGCGAGACATGTACCCGCAACCGCAGGAATACCGCGTACACCCGCCACA CGATCTCGGTGACATTCTGGAAGGCGAATTCCGCCCCGGGTTCTTCACGGGCGTATGCACGGTCGTGATGAAGCTGATGT CGTGCGTGCAGCCGCGCGTCGCCGTGTTCGGCAAGAAGGACTACCAGCAGTTGATGATCGTGCGCGCGATGACCGAGCAG TTTGCGCTGCCCACCGACATCGTCGCCGCCGAGACCGTGCGCGACACCGACGGTCTCGCGCTCAGCTCGCGCAACCGCTA TCTGACTCAAACCGAGCGCGCCGAAGCGCCAATGCTCGCGGCAACGCTGCAAGGCGTACGTCAGGCCGTGCTGTCGGGCA ACCGCGACTTCGCGAAACTCGAACGGGACGCGATGGCGTCGCTGGCAGCACGCGGCTGGAAGCCGGATTACATCGCGATT CGCAAGCGCTCGAACCTGATCGCGCCCGCCGCGCAGGACCTGGATGCGCCGCTCGTCGTGCTGGCGGCGGCCAAGCTCGG CGCGACGCGCCTCATCGACAACCTCGAAATCTGA
Upstream 100 bases:
>100_bases GCCGCCCCCGTTTCGCGGATATCACGAAACCGCGCGCTGCGTCGCGCGACCGAGACAACCACGAGCCACGCGCACGCGTG ACTCCCAACATCGCCCGACC
Downstream 100 bases:
>100_bases CGGCCGGAAGGACAAGCCATGCAACGCAACATGCTGAAGTCGAAGATTCACCGCGCGGTGGTCACGCACTGCGAATTGCA CTACGAAGGGTCGTGTGCGA
Product: pantoate--beta-alanine ligase
Products: NA
Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MKVISSIQELRDQLRGQNRTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLEADIEKLQK ENVYVLFAPTERDMYPQPQEYRVHPPHDLGDILEGEFRPGFFTGVCTVVMKLMSCVQPRVAVFGKKDYQQLMIVRAMTEQ FALPTDIVAAETVRDTDGLALSSRNRYLTQTERAEAPMLAATLQGVRQAVLSGNRDFAKLERDAMASLAARGWKPDYIAI RKRSNLIAPAAQDLDAPLVVLAAAKLGATRLIDNLEI
Sequences:
>Translated_277_residues MKVISSIQELRDQLRGQNRTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLEADIEKLQK ENVYVLFAPTERDMYPQPQEYRVHPPHDLGDILEGEFRPGFFTGVCTVVMKLMSCVQPRVAVFGKKDYQQLMIVRAMTEQ FALPTDIVAAETVRDTDGLALSSRNRYLTQTERAEAPMLAATLQGVRQAVLSGNRDFAKLERDAMASLAARGWKPDYIAI RKRSNLIAPAAQDLDAPLVVLAAAKLGATRLIDNLEI >Mature_277_residues MKVISSIQELRDQLRGQNRTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLEADIEKLQK ENVYVLFAPTERDMYPQPQEYRVHPPHDLGDILEGEFRPGFFTGVCTVVMKLMSCVQPRVAVFGKKDYQQLMIVRAMTEQ FALPTDIVAAETVRDTDGLALSSRNRYLTQTERAEAPMLAATLQGVRQAVLSGNRDFAKLERDAMASLAARGWKPDYIAI RKRSNLIAPAAQDLDAPLVVLAAAKLGATRLIDNLEI
Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
COG id: COG0414
COG function: function code H; Panthothenate synthetase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pantothenate synthetase family
Homologues:
Organism=Escherichia coli, GI1786325, Length=279, Percent_Identity=42.6523297491039, Blast_Score=206, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6322046, Length=299, Percent_Identity=35.4515050167224, Blast_Score=152, Evalue=4e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PANC_BURP8 (B2JEQ7)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001858418.1 - ProteinModelPortal: B2JEQ7 - SMR: B2JEQ7 - GeneID: 6243683 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_2197 - HOGENOM: HBG428839 - OMA: RLIDNFT - ProtClustDB: PRK00380 - GO: GO:0005737 - HAMAP: MF_00158 - InterPro: IPR004821 - InterPro: IPR003721 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR21299:SF1 - TIGRFAMs: TIGR00125 - TIGRFAMs: TIGR00018
Pfam domain/function: PF02569 Pantoate_ligase
EC number: =6.3.2.1
Molecular weight: Translated: 31049; Mature: 31049
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: ACT_SITE 33-33 BINDING 57-57 BINDING 57-57 BINDING 150-150 BINDING 173-173
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVISSIQELRDQLRGQNRTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGP CHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC NEDFDKYPRTLEADIEKLQKENVYVLFAPTERDMYPQPQEYRVHPPHDLGDILEGEFRPG CCCHHHCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC FFTGVCTVVMKLMSCVQPRVAVFGKKDYQQLMIVRAMTEQFALPTDIVAAETVRDTDGLA HHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCE LSSRNRYLTQTERAEAPMLAATLQGVRQAVLSGNRDFAKLERDAMASLAARGWKPDYIAI ECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEE RKRSNLIAPAAQDLDAPLVVLAAAKLGATRLIDNLEI ECCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKVISSIQELRDQLRGQNRTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGP CHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC NEDFDKYPRTLEADIEKLQKENVYVLFAPTERDMYPQPQEYRVHPPHDLGDILEGEFRPG CCCHHHCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC FFTGVCTVVMKLMSCVQPRVAVFGKKDYQQLMIVRAMTEQFALPTDIVAAETVRDTDGLA HHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCE LSSRNRYLTQTERAEAPMLAATLQGVRQAVLSGNRDFAKLERDAMASLAARGWKPDYIAI ECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEE RKRSNLIAPAAQDLDAPLVVLAAAKLGATRLIDNLEI ECCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA