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The map label for this gene is ybcL [H]

Identifier: 186476893

GI number: 186476893

Start: 2404276

End: 2404785

Strand: Direct

Name: ybcL [H]

Synonym: Bphy_2142

Alternate gene names: 186476893

Gene position: 2404276-2404785 (Clockwise)

Preceding gene: 186476892

Following gene: 186476894

Centisome position: 69.1

GC content: 65.1

Gene sequence:

>510_bases
ATGGCTGATTTCCGAATCTGGTCCGACGACTTTCCTGCCAACGGCTTTATGTCGAAGGCACAGGAGATGAACGACAAATC
GTTCGGCGTGGCGGGCGACGGCGAAAACATGTCGCCCGCCCTGCAATGGGACGCGCCGCCCGCCGACACGCAAAGTTTCG
CGCTCACCGTCTACGATCCCGACGCGCCCACGGGCAGCGGCTTCTGGCATTGGGTCGTCGTCAACCTCCCTGCCGACGCA
CGCTCGCTGCCGCGCAACGCGGGCAAGGCGGACGGCAGCCTGTTGCCGCCGGGCGCGCTGCAGTTTCGCAACGACTACGG
CACGGTCGGCTTTGGCGGCGCAGCGCCGGTGCGCGGCGACAAGCCGCATCGCTTCATCTTCCGCATTCATGCGCTGAGGG
TGACGAACCTGCCCCTCGCCGCCGACACGACGAATGCCGTCGCCCGCTACATGACGCATCTGAACGAGATCGATTCGGCC
ACGTACACGGGCCTGTACGAACTCAAGTAG

Upstream 100 bases:

>100_bases
TACACTCGACTGGCTCACTGGAGCTTCGAACGCAGTCTCTTATGCGATCTCACAGCGGCTCCCGTCCATCTTGGAACCAC
CCCACTGAAGGAGGCGCACG

Downstream 100 bases:

>100_bases
CGGCGGCGCCTTTTCGACAGGAACCGCATTGCCGGGCATGCAGCGCGCACAACACGCCCGGCCCACGCGATCGGCCTGTC
TCTCGGCACGGCATGACAGC

Product: PEBP family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MADFRIWSDDFPANGFMSKAQEMNDKSFGVAGDGENMSPALQWDAPPADTQSFALTVYDPDAPTGSGFWHWVVVNLPADA
RSLPRNAGKADGSLLPPGALQFRNDYGTVGFGGAAPVRGDKPHRFIFRIHALRVTNLPLAADTTNAVARYMTHLNEIDSA
TYTGLYELK

Sequences:

>Translated_169_residues
MADFRIWSDDFPANGFMSKAQEMNDKSFGVAGDGENMSPALQWDAPPADTQSFALTVYDPDAPTGSGFWHWVVVNLPADA
RSLPRNAGKADGSLLPPGALQFRNDYGTVGFGGAAPVRGDKPHRFIFRIHALRVTNLPLAADTTNAVARYMTHLNEIDSA
TYTGLYELK
>Mature_168_residues
ADFRIWSDDFPANGFMSKAQEMNDKSFGVAGDGENMSPALQWDAPPADTQSFALTVYDPDAPTGSGFWHWVVVNLPADAR
SLPRNAGKADGSLLPPGALQFRNDYGTVGFGGAAPVRGDKPHRFIFRIHALRVTNLPLAADTTNAVARYMTHLNEIDSAT
YTGLYELK

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=168, Percent_Identity=44.6428571428571, Blast_Score=160, Evalue=4e-41,
Organism=Escherichia coli, GI1786990, Length=139, Percent_Identity=46.7625899280576, Blast_Score=133, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 18377; Mature: 18245

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADFRIWSDDFPANGFMSKAQEMNDKSFGVAGDGENMSPALQWDAPPADTQSFALTVYDP
CCCCEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECC
DAPTGSGFWHWVVVNLPADARSLPRNAGKADGSLLPPGALQFRNDYGTVGFGGAAPVRGD
CCCCCCCEEEEEEEECCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCCCCC
KPHRFIFRIHALRVTNLPLAADTTNAVARYMTHLNEIDSATYTGLYELK
CCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEC
>Mature Secondary Structure 
ADFRIWSDDFPANGFMSKAQEMNDKSFGVAGDGENMSPALQWDAPPADTQSFALTVYDP
CCCEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECC
DAPTGSGFWHWVVVNLPADARSLPRNAGKADGSLLPPGALQFRNDYGTVGFGGAAPVRGD
CCCCCCCEEEEEEEECCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCCCCC
KPHRFIFRIHALRVTNLPLAADTTNAVARYMTHLNEIDSATYTGLYELK
CCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 11439028 [H]