Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186476847

Identifier: 186476847

GI number: 186476847

Start: 2350473

End: 2352656

Strand: Direct

Name: 186476847

Synonym: Bphy_2093

Alternate gene names: NA

Gene position: 2350473-2352656 (Clockwise)

Preceding gene: 186476845

Following gene: 186476848

Centisome position: 67.56

GC content: 64.56

Gene sequence:

>2184_bases
GTGCGCAAGCGCACTTATTACACGTCGACCGACCGCCTTAACATGCCCGCATTGATCGAAGACTATGCACTCATCGGCGA
CGGCCACACGGCCGCGCTGGTTTCCCGCGATGGTTCCGTCGACTGGCTGTGCTGGCCCCGTTTCGACTCCGGCGCGTGCT
TTGCCGCACTGCTCGGAACCGAGGAGAACGGCCGCTGGCTGATCGCGCCCTCCGACGATACCGAATGCGAAGACTCGGCA
GACCTGCCCTGCGCCGACGAATCCGGCCATGACCGGACGCGTTTTCACGACGAGACGCAAGGAGAAACGAAAACATCCGA
AAGCGGACGTACGGTATCGAACGATAAACCGGTCCCACGCCAGGCCGACGGTCCGCCCGTCTCGCGTGCCGCCGCACGCG
CAAACGCCGCGGCCGCCGAGGCAAAGCGCGATGCTCACGATGACGACAAGAGAAAAGCGCCTAACCTCAAGCCCGGCTAC
GCACGCGCGACGCGCCGTCGCTATCGCGGCGAAACGCTGATCCTCGAGACCGACTTCGAAACGCCCGACGGCGCCGTTAC
ACTGGTCGACTTCATGCCCCCCGGCAACGGCTGGTCGGAAATGATCCGCATCGTCGTCGGCAAGCGCGGCACCGTGAAGA
TGCGCATGGAACTCGTGCTGCGCTTCGACTACGGCTTCTCCATTCCGTGGGTCAGCCGGCTCGCGCACGAAAGCGGCATC
AAGGCGATCGCCGGCCCGGACACGGTCGCGCTGCGTACACCCGTCGACCTGCATGGCGAGAACATGAAGACGGTCGCCGA
GTTCACCGTATCGGAAGGCGAACGTGTGCCCTTCTCGCTCACGTATTCCCAATCGCACCTGCGCATTCCGCCCGCGCGCG
ATCCGCACAGTGCGCTGGCGCGTACCGAGAATCACTGGCTCGAATGGGCGGCGCGCGGCACCGTAGAGGGGAAATACGCG
CCCGCTATACGCCGCTCGCTGCTGACACTGAAGGCACTCGCGTATGAGCCGACGGGCGGCATCGTCGCCGCGCCGACCAC
GTCTCTGCCTGAAAAGCTCGGCGGCGCGCGCAACTGGGATTATCGCTACGTGTGGCTGCGCGACGCCACCATCACGCTGC
TCGCGATGATGCGCGGCGGCTACTACGACGAAGCGCGTGCGTGGCGTGCGTGGCTGGGTCGCGTGATGGCGGGCTCGCCT
GAACAGTTGCAGATCATGTACGGGCTCGCGGGCGAGCGTCGGCTGCCCGAGTTCGAACTCGACTGGCTGCCGGGCTACGA
AGACTCGAAGCCCGTGCGGGTCGGCAACAACGCGGTCGGCCAGTTGCAACTCGACGTATACGGCGAAGTGATGAATGCGC
TGCATCTCGCGCGCGTCGGCGGCTTGCAGGCTGACGAGACCGCGTGGAACGTGCAGTGCGCGATGCTTGGTCACCTCGAA
ACGATCTGGCAGGAACGCGACGAAGGTATCTGGGAAACGCGAGGCGGCCGACAGCACTTCACGTTCTCGAAGGTGATGGC
GTGGGTCGCGTTCGATCGCGCGATCAAATCGGCGCAAGCGTTCGACCTGCCCGGGCCGCTCGAACACTGGCAGGAAATAC
GCGCGCAAATCCATGCCGACGTCTGCGAGAAAAGCTGGAATACGCGGCTCAACGCGTTCACGCAGACGTATGGCGGCAAC
GAACTCGATGCGAGCGTGCTGCTGATGCCGCTGCTCGGCTTTTTGCCGCCTTCAGATCCGCGCGTCGTCGGCACCGTCCA
CGCGATCGAAAAACATCTGATGCGCGACGGCTTCGTGCTGCGCTACCACACGACCGAATTCGACGATGGGCTGCCGCCCG
GCGAAGGGACGTTTCTCGCATGCAGTTTCTGGATGGTCGACAATCTCGCGTTGCAGGGGCGCGTCGACGAGGCGCGGGCC
ATGTACGAGCGGTTGCTGTCGCTGGCGAACGACGTCGGCCTGCTCGCCGAGGAATACGATCCCGCCGACGGCCGGTTTGT
CGGCAATTTTCCACAGGGGTTTTCCCATGTGGCCCTCGTTCACACGGGACTCAACCTGATGAAACACGAGCAGGAAATGG
CGCGCGCCGCCGGTCAGCCGCCCCACGACGGCGAGAGCGGAGAAGGCGGCCCGCCGCCGGCTGGCATGTCAGATGCTCAG
AGTCAATCGTCACCCGTTGTCTAA

Upstream 100 bases:

>100_bases
CAAAAACGGTATTGCCAATACCTCGAACGCTCATGAGCGTGCGGCTTTCCCGCGTCGCGCTGGAGCCCGGTAACAACGAC
GCTCACGCACCGTTCCCGCC

Downstream 100 bases:

>100_bases
AGAAAACGGGCGAATTGACGATGACGTAGCTATGACAGCCGGTGCGTGCGGCAACGCACTGTTGTTGCATTGCACAAATT
GTATGGCTTCTATATCATCA

Product: glycoside hydrolase 15-like protein

Products: NA

Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Glucoamylase; Glycoside Hydrolase Family Protein; Trehalose-Phosphatase; Trehalose-Phosphatase/Glycoside Hydrolase; Glucoamylase-Like Glycosyl Hydrolase; Trehalose Phosphatase; Glycosyl Hydrolase Glucoamylase; Glucoamylase Or Related Glycosyl Hydrolase; Six-Hairpin Glycosidase-Like Protein; Trehalose 6-Phosphatase; Trehalose-Phosphatase/ Glycoside Hydrolase; Glucoamylase Or Related Glycosyl Hydrolase Protein; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Protein; Trehalose-6-Phosphate Phophatase; Glycosyl Hydrolase Family Protein

Number of amino acids: Translated: 727; Mature: 727

Protein sequence:

>727_residues
MRKRTYYTSTDRLNMPALIEDYALIGDGHTAALVSRDGSVDWLCWPRFDSGACFAALLGTEENGRWLIAPSDDTECEDSA
DLPCADESGHDRTRFHDETQGETKTSESGRTVSNDKPVPRQADGPPVSRAAARANAAAAEAKRDAHDDDKRKAPNLKPGY
ARATRRRYRGETLILETDFETPDGAVTLVDFMPPGNGWSEMIRIVVGKRGTVKMRMELVLRFDYGFSIPWVSRLAHESGI
KAIAGPDTVALRTPVDLHGENMKTVAEFTVSEGERVPFSLTYSQSHLRIPPARDPHSALARTENHWLEWAARGTVEGKYA
PAIRRSLLTLKALAYEPTGGIVAAPTTSLPEKLGGARNWDYRYVWLRDATITLLAMMRGGYYDEARAWRAWLGRVMAGSP
EQLQIMYGLAGERRLPEFELDWLPGYEDSKPVRVGNNAVGQLQLDVYGEVMNALHLARVGGLQADETAWNVQCAMLGHLE
TIWQERDEGIWETRGGRQHFTFSKVMAWVAFDRAIKSAQAFDLPGPLEHWQEIRAQIHADVCEKSWNTRLNAFTQTYGGN
ELDASVLLMPLLGFLPPSDPRVVGTVHAIEKHLMRDGFVLRYHTTEFDDGLPPGEGTFLACSFWMVDNLALQGRVDEARA
MYERLLSLANDVGLLAEEYDPADGRFVGNFPQGFSHVALVHTGLNLMKHEQEMARAAGQPPHDGESGEGGPPPAGMSDAQ
SQSSPVV

Sequences:

>Translated_727_residues
MRKRTYYTSTDRLNMPALIEDYALIGDGHTAALVSRDGSVDWLCWPRFDSGACFAALLGTEENGRWLIAPSDDTECEDSA
DLPCADESGHDRTRFHDETQGETKTSESGRTVSNDKPVPRQADGPPVSRAAARANAAAAEAKRDAHDDDKRKAPNLKPGY
ARATRRRYRGETLILETDFETPDGAVTLVDFMPPGNGWSEMIRIVVGKRGTVKMRMELVLRFDYGFSIPWVSRLAHESGI
KAIAGPDTVALRTPVDLHGENMKTVAEFTVSEGERVPFSLTYSQSHLRIPPARDPHSALARTENHWLEWAARGTVEGKYA
PAIRRSLLTLKALAYEPTGGIVAAPTTSLPEKLGGARNWDYRYVWLRDATITLLAMMRGGYYDEARAWRAWLGRVMAGSP
EQLQIMYGLAGERRLPEFELDWLPGYEDSKPVRVGNNAVGQLQLDVYGEVMNALHLARVGGLQADETAWNVQCAMLGHLE
TIWQERDEGIWETRGGRQHFTFSKVMAWVAFDRAIKSAQAFDLPGPLEHWQEIRAQIHADVCEKSWNTRLNAFTQTYGGN
ELDASVLLMPLLGFLPPSDPRVVGTVHAIEKHLMRDGFVLRYHTTEFDDGLPPGEGTFLACSFWMVDNLALQGRVDEARA
MYERLLSLANDVGLLAEEYDPADGRFVGNFPQGFSHVALVHTGLNLMKHEQEMARAAGQPPHDGESGEGGPPPAGMSDAQ
SQSSPVV
>Mature_727_residues
MRKRTYYTSTDRLNMPALIEDYALIGDGHTAALVSRDGSVDWLCWPRFDSGACFAALLGTEENGRWLIAPSDDTECEDSA
DLPCADESGHDRTRFHDETQGETKTSESGRTVSNDKPVPRQADGPPVSRAAARANAAAAEAKRDAHDDDKRKAPNLKPGY
ARATRRRYRGETLILETDFETPDGAVTLVDFMPPGNGWSEMIRIVVGKRGTVKMRMELVLRFDYGFSIPWVSRLAHESGI
KAIAGPDTVALRTPVDLHGENMKTVAEFTVSEGERVPFSLTYSQSHLRIPPARDPHSALARTENHWLEWAARGTVEGKYA
PAIRRSLLTLKALAYEPTGGIVAAPTTSLPEKLGGARNWDYRYVWLRDATITLLAMMRGGYYDEARAWRAWLGRVMAGSP
EQLQIMYGLAGERRLPEFELDWLPGYEDSKPVRVGNNAVGQLQLDVYGEVMNALHLARVGGLQADETAWNVQCAMLGHLE
TIWQERDEGIWETRGGRQHFTFSKVMAWVAFDRAIKSAQAFDLPGPLEHWQEIRAQIHADVCEKSWNTRLNAFTQTYGGN
ELDASVLLMPLLGFLPPSDPRVVGTVHAIEKHLMRDGFVLRYHTTEFDDGLPPGEGTFLACSFWMVDNLALQGRVDEARA
MYERLLSLANDVGLLAEEYDPADGRFVGNFPQGFSHVALVHTGLNLMKHEQEMARAAGQPPHDGESGEGGPPPAGMSDAQ
SQSSPVV

Specific function: Unknown

COG id: COG3387

COG function: function code G; Glucoamylase and related glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80555; Mature: 80555

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRTYYTSTDRLNMPALIEDYALIGDGHTAALVSRDGSVDWLCWPRFDSGACFAALLGT
CCCCEEECCCCCCCCCHHHHCCEEECCCCEEEEEECCCCEEEEEECCCCCCCEEEEEECC
EENGRWLIAPSDDTECEDSADLPCADESGHDRTRFHDETQGETKTSESGRTVSNDKPVPR
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QADGPPVSRAAARANAAAAEAKRDAHDDDKRKAPNLKPGYARATRRRYRGETLILETDFE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCC
TPDGAVTLVDFMPPGNGWSEMIRIVVGKRGTVKMRMELVLRFDYGFSIPWVSRLAHESGI
CCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHCC
KAIAGPDTVALRTPVDLHGENMKTVAEFTVSEGERVPFSLTYSQSHLRIPPARDPHSALA
CEECCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCHHHHHH
RTENHWLEWAARGTVEGKYAPAIRRSLLTLKALAYEPTGGIVAAPTTSLPEKLGGARNWD
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEECCCCCEEECCCCCCHHHHCCCCCCC
YRYVWLRDATITLLAMMRGGYYDEARAWRAWLGRVMAGSPEQLQIMYGLAGERRLPEFEL
EEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC
DWLPGYEDSKPVRVGNNAVGQLQLDVYGEVMNALHLARVGGLQADETAWNVQCAMLGHLE
CCCCCCCCCCCEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHH
TIWQERDEGIWETRGGRQHFTFSKVMAWVAFDRAIKSAQAFDLPGPLEHWQEIRAQIHAD
HHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
VCEKSWNTRLNAFTQTYGGNELDASVLLMPLLGFLPPSDPRVVGTVHAIEKHLMRDGFVL
HHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCEEE
RYHTTEFDDGLPPGEGTFLACSFWMVDNLALQGRVDEARAMYERLLSLANDVGLLAEEYD
EEECCCCCCCCCCCCCCEEEEEEEHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PADGRFVGNFPQGFSHVALVHTGLNLMKHEQEMARAAGQPPHDGESGEGGPPPAGMSDAQ
CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
SQSSPVV
CCCCCCC
>Mature Secondary Structure
MRKRTYYTSTDRLNMPALIEDYALIGDGHTAALVSRDGSVDWLCWPRFDSGACFAALLGT
CCCCEEECCCCCCCCCHHHHCCEEECCCCEEEEEECCCCEEEEEECCCCCCCEEEEEECC
EENGRWLIAPSDDTECEDSADLPCADESGHDRTRFHDETQGETKTSESGRTVSNDKPVPR
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QADGPPVSRAAARANAAAAEAKRDAHDDDKRKAPNLKPGYARATRRRYRGETLILETDFE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCC
TPDGAVTLVDFMPPGNGWSEMIRIVVGKRGTVKMRMELVLRFDYGFSIPWVSRLAHESGI
CCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHCC
KAIAGPDTVALRTPVDLHGENMKTVAEFTVSEGERVPFSLTYSQSHLRIPPARDPHSALA
CEECCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCHHHHHH
RTENHWLEWAARGTVEGKYAPAIRRSLLTLKALAYEPTGGIVAAPTTSLPEKLGGARNWD
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEECCCCCEEECCCCCCHHHHCCCCCCC
YRYVWLRDATITLLAMMRGGYYDEARAWRAWLGRVMAGSPEQLQIMYGLAGERRLPEFEL
EEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC
DWLPGYEDSKPVRVGNNAVGQLQLDVYGEVMNALHLARVGGLQADETAWNVQCAMLGHLE
CCCCCCCCCCCEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHH
TIWQERDEGIWETRGGRQHFTFSKVMAWVAFDRAIKSAQAFDLPGPLEHWQEIRAQIHAD
HHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
VCEKSWNTRLNAFTQTYGGNELDASVLLMPLLGFLPPSDPRVVGTVHAIEKHLMRDGFVL
HHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCEEE
RYHTTEFDDGLPPGEGTFLACSFWMVDNLALQGRVDEARAMYERLLSLANDVGLLAEEYD
EEECCCCCCCCCCCCCCEEEEEEEHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PADGRFVGNFPQGFSHVALVHTGLNLMKHEQEMARAAGQPPHDGESGEGGPPPAGMSDAQ
CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
SQSSPVV
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA