Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is gluQ [H]
Identifier: 186476835
GI number: 186476835
Start: 2334689
End: 2335573
Strand: Direct
Name: gluQ [H]
Synonym: Bphy_2081
Alternate gene names: 186476835
Gene position: 2334689-2335573 (Clockwise)
Preceding gene: 186476834
Following gene: 186476842
Centisome position: 67.1
GC content: 68.36
Gene sequence:
>885_bases ATGACGCGCTATCGCGGACGTTTCGCGCCCTCCCCCACGGGCCCGCTGCATGTCGGCTCGCTGGTCAGCGCACTCGCAAG CTGGCTGGATGCGCGCGCCAATCGCGGCACGTGGCTGGTGCGTATCGAAGACATCGACGGGCCGCGCACCGTCCCGGGCG CCGCGCAGCACATCCTCGATACGCTCACGCGCTTCGGCATGACGGCCGACGAACCGCCCGTCTGGCAAAGCCAGCGCGCA GCGCTTTACCAGCAGGCATTCGAACGCCTGCAGGCCACAGGCCTCGTCTATCCCTGCGGCTGCACGCGCAAGGAAATCGC CGATTCGCTGGTCCGGACCCACGCCCGGCACACGACGCTCGCCTACCCCGGCACCTGCCGCAACGGCCTGAACGGCAAGC CCGCGCGCGCGTGGCGACTGCGTGTGCCGGACGGCGATGCCGCCATCGTGACGTTCGACGATCGCTGGCAAGGGCGGCAA GTGCAGAATCTCGCCACTGAAGTCGGCGACTTCGTGCTGCGTCGCGCGGACGATCAGTGGGCCTATCAGCTGGCCGTGGT CGTCGACGACGCGGATCAGGGCATCACCCACATTGTGCGCGGCGCCGACCTGCTCGACTCGACCGCCCGACAGATCTACC TGCAGCGCTGCCTCGGCGTGGCCACGCCCTCCTACCTGCATGTGCCCGTCGTGACGAACGCCGACGGCGAAAAGCTCAGC AAGCAGACGGGTGCCGCGGCCCTCGACGCATCGGAGCCGCTCGTCACGCTGAACCGTGCGGCGCGGCATCTGGGATTGAA GCTGGGAGAAGCAGCGGCGACATCGCTCGATGCGTTCTACACGGAAGCCGTCGCGGCGTGGTCGGATCGCATCAGGCGGC AATAA
Upstream 100 bases:
>100_bases CCGCGCATGCAGCGGATCTGGTCTGAGCGCAGCGCGTCATCACCCGCTGCATGAACCCGTTTTGCATGCGCCGTGCCGCC GCGGCTCACGACACCTGAAC
Downstream 100 bases:
>100_bases CGCCGCGCCAACAAAGATGGCGCCCGAAAGGCGCCATTCGCAAAAGCAATCAGAACGGCAAGCGCTGCGACATCAATTCG ACGACGTCGTCTTGCGCGGC
Product: glutamyl-Q tRNA(Asp) synthetase
Products: NA
Alternate protein names: Glu-Q-RSs [H]
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MTRYRGRFAPSPTGPLHVGSLVSALASWLDARANRGTWLVRIEDIDGPRTVPGAAQHILDTLTRFGMTADEPPVWQSQRA ALYQQAFERLQATGLVYPCGCTRKEIADSLVRTHARHTTLAYPGTCRNGLNGKPARAWRLRVPDGDAAIVTFDDRWQGRQ VQNLATEVGDFVLRRADDQWAYQLAVVVDDADQGITHIVRGADLLDSTARQIYLQRCLGVATPSYLHVPVVTNADGEKLS KQTGAAALDASEPLVTLNRAARHLGLKLGEAAATSLDAFYTEAVAAWSDRIRRQ
Sequences:
>Translated_294_residues MTRYRGRFAPSPTGPLHVGSLVSALASWLDARANRGTWLVRIEDIDGPRTVPGAAQHILDTLTRFGMTADEPPVWQSQRA ALYQQAFERLQATGLVYPCGCTRKEIADSLVRTHARHTTLAYPGTCRNGLNGKPARAWRLRVPDGDAAIVTFDDRWQGRQ VQNLATEVGDFVLRRADDQWAYQLAVVVDDADQGITHIVRGADLLDSTARQIYLQRCLGVATPSYLHVPVVTNADGEKLS KQTGAAALDASEPLVTLNRAARHLGLKLGEAAATSLDAFYTEAVAAWSDRIRRQ >Mature_293_residues TRYRGRFAPSPTGPLHVGSLVSALASWLDARANRGTWLVRIEDIDGPRTVPGAAQHILDTLTRFGMTADEPPVWQSQRAA LYQQAFERLQATGLVYPCGCTRKEIADSLVRTHARHTTLAYPGTCRNGLNGKPARAWRLRVPDGDAAIVTFDDRWQGRQV QNLATEVGDFVLRRADDQWAYQLAVVVDDADQGITHIVRGADLLDSTARQIYLQRCLGVATPSYLHVPVVTNADGEKLSK QTGAAALDASEPLVTLNRAARHLGLKLGEAAATSLDAFYTEAVAAWSDRIRRQ
Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=263, Percent_Identity=38.7832699619772, Blast_Score=165, Evalue=4e-41, Organism=Escherichia coli, GI226510925, Length=266, Percent_Identity=45.8646616541353, Blast_Score=204, Evalue=6e-54, Organism=Escherichia coli, GI1788743, Length=277, Percent_Identity=34.2960288808664, Blast_Score=159, Evalue=2e-40, Organism=Caenorhabditis elegans, GI71993394, Length=296, Percent_Identity=30.7432432432432, Blast_Score=119, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6324540, Length=265, Percent_Identity=33.5849056603774, Blast_Score=145, Evalue=7e-36, Organism=Drosophila melanogaster, GI24665321, Length=262, Percent_Identity=36.2595419847328, Blast_Score=149, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022380 - InterPro: IPR000924 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: NA
Molecular weight: Translated: 32238; Mature: 32107
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRYRGRFAPSPTGPLHVGSLVSALASWLDARANRGTWLVRIEDIDGPRTVPGAAQHILD CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHH TLTRFGMTADEPPVWQSQRAALYQQAFERLQATGLVYPCGCTRKEIADSLVRTHARHTTL HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCEE AYPGTCRNGLNGKPARAWRLRVPDGDAAIVTFDDRWQGRQVQNLATEVGDFVLRRADDQW ECCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCE AYQLAVVVDDADQGITHIVRGADLLDSTARQIYLQRCLGVATPSYLHVPVVTNADGEKLS EEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHH KQTGAAALDASEPLVTLNRAARHLGLKLGEAAATSLDAFYTEAVAAWSDRIRRQ HHHCCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TRYRGRFAPSPTGPLHVGSLVSALASWLDARANRGTWLVRIEDIDGPRTVPGAAQHILD CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHH TLTRFGMTADEPPVWQSQRAALYQQAFERLQATGLVYPCGCTRKEIADSLVRTHARHTTL HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCEE AYPGTCRNGLNGKPARAWRLRVPDGDAAIVTFDDRWQGRQVQNLATEVGDFVLRRADDQW ECCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCE AYQLAVVVDDADQGITHIVRGADLLDSTARQIYLQRCLGVATPSYLHVPVVTNADGEKLS EEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHH KQTGAAALDASEPLVTLNRAARHLGLKLGEAAATSLDAFYTEAVAAWSDRIRRQ HHHCCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA