Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is kdtX [H]
Identifier: 186476832
GI number: 186476832
Start: 2329075
End: 2329842
Strand: Direct
Name: kdtX [H]
Synonym: Bphy_2078
Alternate gene names: 186476832
Gene position: 2329075-2329842 (Clockwise)
Preceding gene: 186476828
Following gene: 186476834
Centisome position: 66.94
GC content: 65.36
Gene sequence:
>768_bases ATGACACAACCCACACTCGGCGTCGCCATCATCACGAAAAACGCGGCGCTCAGGCTCGACGAATGCCTGCGCGCCGTCGC GTTCGCCGACGAGATCGTCGTCGTCGACAGCGGCAGCACGGACGCCACCGTCGAGATCGCCCGTTCGCACGGCGCGCGCG TACTCTCGCATACCGACTGGCCCGGTTTCGGTCCGCAAAAAAACCGTGCGCTGGACGCGCTCGGCACGACCTGGGTGCTG TCGATCGATGCAGACGAGATCGTCACGCCTGAACTGGCTGTCTCGATTGCCGGCGTGCTCGCCGCGCCGGACGCCGACGT TTATGCCGTCGACCGTTTGTCGGCGTTCTGCGGACACTGGGTGCGGCACAGCGGCTGGTATCCGGACTGGATTCCGCGCC TGTTTAAACGCGGCAGCGCGCGTTTCTCCGACGACCTCGTGCACGAACGCCTCATGTTCGAGTCGCCCGCGAAGCATCTG GAAGGCAAATTGATGCACCACTCGTACGAAGACTTCGAGACGGTGCTACGCAAGCTCGACGCGTATTCGACGGCAGGCGC GCAGCAGCGCCACGCGGCCGGCCAGCGGGGCAGCTTCGGCAAGGCCGTCGCACGCGGCGCGTGGGCGTTCGTGCGGACCT ACCTGCTGCGCTGTGGATTTCTCGACGGCCGCGCGGGTTTCATGATCGCGATGTTCAACGCGGAGACCGTGTACTACCGG TTCGTCAAGCTGGCGCAACTGGGACGCGAAGACGACACGCAGCGCTGA
Upstream 100 bases:
>100_bases GCTGTGTATATACTGGCGCAATTTTCGTCGGGCGGCGGCCATGGCAGCAGCTGCGTGGCCCGGACGCCCGCTCCGCCCGT CTCATCCGGCATCGATTCGC
Downstream 100 bases:
>100_bases ATGCCGCGGGCGCCCGCTACCGGCGCAGCGTCACACGCGGTCAATACACGATTTCGATCGCGCTGCCCGAAAACTCGCGG CGCAATGCGGCGAGCAGTTC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MTQPTLGVAIITKNAALRLDECLRAVAFADEIVVVDSGSTDATVEIARSHGARVLSHTDWPGFGPQKNRALDALGTTWVL SIDADEIVTPELAVSIAGVLAAPDADVYAVDRLSAFCGHWVRHSGWYPDWIPRLFKRGSARFSDDLVHERLMFESPAKHL EGKLMHHSYEDFETVLRKLDAYSTAGAQQRHAAGQRGSFGKAVARGAWAFVRTYLLRCGFLDGRAGFMIAMFNAETVYYR FVKLAQLGREDDTQR
Sequences:
>Translated_255_residues MTQPTLGVAIITKNAALRLDECLRAVAFADEIVVVDSGSTDATVEIARSHGARVLSHTDWPGFGPQKNRALDALGTTWVL SIDADEIVTPELAVSIAGVLAAPDADVYAVDRLSAFCGHWVRHSGWYPDWIPRLFKRGSARFSDDLVHERLMFESPAKHL EGKLMHHSYEDFETVLRKLDAYSTAGAQQRHAAGQRGSFGKAVARGAWAFVRTYLLRCGFLDGRAGFMIAMFNAETVYYR FVKLAQLGREDDTQR >Mature_254_residues TQPTLGVAIITKNAALRLDECLRAVAFADEIVVVDSGSTDATVEIARSHGARVLSHTDWPGFGPQKNRALDALGTTWVLS IDADEIVTPELAVSIAGVLAAPDADVYAVDRLSAFCGHWVRHSGWYPDWIPRLFKRGSARFSDDLVHERLMFESPAKHLE GKLMHHSYEDFETVLRKLDAYSTAGAQQRHAAGQRGSFGKAVARGAWAFVRTYLLRCGFLDGRAGFMIAMFNAETVYYRF VKLAQLGREDDTQR
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 28244; Mature: 28113
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPTLGVAIITKNAALRLDECLRAVAFADEIVVVDSGSTDATVEIARSHGARVLSHTDW CCCCCEEEEEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEHHCCCEEEECCCC PGFGPQKNRALDALGTTWVLSIDADEIVTPELAVSIAGVLAAPDADVYAVDRLSAFCGHW CCCCCCCCCHHHHCCCEEEEEECCCHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VRHSGWYPDWIPRLFKRGSARFSDDLVHERLMFESPAKHLEGKLMHHSYEDFETVLRKLD HHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHH AYSTAGAQQRHAAGQRGSFGKAVARGAWAFVRTYLLRCGFLDGRAGFMIAMFNAETVYYR HHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHH FVKLAQLGREDDTQR HHHHHHHCCCCCCCC >Mature Secondary Structure TQPTLGVAIITKNAALRLDECLRAVAFADEIVVVDSGSTDATVEIARSHGARVLSHTDW CCCCEEEEEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEHHCCCEEEECCCC PGFGPQKNRALDALGTTWVLSIDADEIVTPELAVSIAGVLAAPDADVYAVDRLSAFCGHW CCCCCCCCCHHHHCCCEEEEEECCCHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VRHSGWYPDWIPRLFKRGSARFSDDLVHERLMFESPAKHLEGKLMHHSYEDFETVLRKLD HHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHH AYSTAGAQQRHAAGQRGSFGKAVARGAWAFVRTYLLRCGFLDGRAGFMIAMFNAETVYYR HHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHH FVKLAQLGREDDTQR HHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8824620 [H]