Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is ygcG [H]
Identifier: 186476801
GI number: 186476801
Start: 2296735
End: 2297586
Strand: Direct
Name: ygcG [H]
Synonym: Bphy_2047
Alternate gene names: 186476801
Gene position: 2296735-2297586 (Clockwise)
Preceding gene: 186476800
Following gene: 186476802
Centisome position: 66.01
GC content: 61.62
Gene sequence:
>852_bases TTGAAGGCCTATCTCACGGCACTCGTATTCGTCATGACGTCGCTGGCATTTGCCGGATCAGACGCCTGTGCCGAAGTCCC CGTACCGCCTCTGACTGCACGCGTCGTTGACCAAACAGGGACGCTTACGGGCGAACAGCGTTCGTCGATTGAGCAAACCC TGAAGGACTTTGAAACCCGTAAAGGAAGCCAGATTTCGGTGCTCATCGTGCCGACCACGCAACCCGAGACGATCGAGCAA TATTCGATGCGGGTGGTTGAGCAATACAAGCTCGGACGCGCCAAGGTAGACGATGGCGCACTGTTGATTGTCGCGAAGAA TGACCGGGCGCTTCGCATCGAAGTCGGATATGGCCTGGAAGGCGCATTGAACGATGCGACCAGTAACCGGATTATTCGTG AAGTCATTGTTCCCAAATTCAAACAGGGTGACTTCTATGGCGGGATTGCGGCGGGCGTCGACAGCATGATCCGCGTGGTA GAGGGCGAGCCGTTACCCGCCCCGCAGCGACGCGGCGAATCGAACGGCATGGCAGGGCTCCTGCCCGCATTGTTCGTGAT GGCTGTTCTCACGGGTGGTGTGCTTCGCGCCATCCTCGGCCGGCTGCCAGGCGCCCTTGTAACAGGCGGCATCATCGGCG CGCTGGCGTGGTTTCTCTCCGGGGCCATCGTGCTGGCCTTCGTTGCCGGCGCAGTGGCGCTCGCGTTCACGCTTCTGGGC GGTGGACTGGGAGCCTTCGGTGGCCGCTACATCGGAGGTCGGTCCGGAGGGATTGCCGGCCGTTCGAACCGCGATATCTT CAGGGGCGGAGGCGGCGGGTTTGGCGGTGGCGGCGCTTCGGGAAGGTGGTGA
Upstream 100 bases:
>100_bases AGGAGAAGCCGAACTTCTCGGTTGCGAACGAAGCAGAAATCGCCAGACCGCCGCGCGTTGATTTCGGCGCAGCCCCCGCA TCTGCCGGTGGAGGCAACAA
Downstream 100 bases:
>100_bases CCGTGGACCTTAAACGTATCGTTCATCATCTGTCGATGACCCGCTGGTCGGTCAATGCCGCGTTTCCACCGCGCACGCTA TCGGCCATCGAGCAGGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MKAYLTALVFVMTSLAFAGSDACAEVPVPPLTARVVDQTGTLTGEQRSSIEQTLKDFETRKGSQISVLIVPTTQPETIEQ YSMRVVEQYKLGRAKVDDGALLIVAKNDRALRIEVGYGLEGALNDATSNRIIREVIVPKFKQGDFYGGIAAGVDSMIRVV EGEPLPAPQRRGESNGMAGLLPALFVMAVLTGGVLRAILGRLPGALVTGGIIGALAWFLSGAIVLAFVAGAVALAFTLLG GGLGAFGGRYIGGRSGGIAGRSNRDIFRGGGGGFGGGGASGRW
Sequences:
>Translated_283_residues MKAYLTALVFVMTSLAFAGSDACAEVPVPPLTARVVDQTGTLTGEQRSSIEQTLKDFETRKGSQISVLIVPTTQPETIEQ YSMRVVEQYKLGRAKVDDGALLIVAKNDRALRIEVGYGLEGALNDATSNRIIREVIVPKFKQGDFYGGIAAGVDSMIRVV EGEPLPAPQRRGESNGMAGLLPALFVMAVLTGGVLRAILGRLPGALVTGGIIGALAWFLSGAIVLAFVAGAVALAFTLLG GGLGAFGGRYIGGRSGGIAGRSNRDIFRGGGGGFGGGGASGRW >Mature_283_residues MKAYLTALVFVMTSLAFAGSDACAEVPVPPLTARVVDQTGTLTGEQRSSIEQTLKDFETRKGSQISVLIVPTTQPETIEQ YSMRVVEQYKLGRAKVDDGALLIVAKNDRALRIEVGYGLEGALNDATSNRIIREVIVPKFKQGDFYGGIAAGVDSMIRVV EGEPLPAPQRRGESNGMAGLLPALFVMAVLTGGVLRAILGRLPGALVTGGIIGALAWFLSGAIVLAFVAGAVALAFTLLG GGLGAFGGRYIGGRSGGIAGRSNRDIFRGGGGGFGGGGASGRW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=129, Percent_Identity=41.8604651162791, Blast_Score=114, Evalue=7e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 29285; Mature: 29285
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAYLTALVFVMTSLAFAGSDACAEVPVPPLTARVVDQTGTLTGEQRSSIEQTLKDFETR CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC KGSQISVLIVPTTQPETIEQYSMRVVEQYKLGRAKVDDGALLIVAKNDRALRIEVGYGLE CCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEECCCEEEEEECCCCEEEEEECCCCC GALNDATSNRIIREVIVPKFKQGDFYGGIAAGVDSMIRVVEGEPLPAPQRRGESNGMAGL CCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHH LPALFVMAVLTGGVLRAILGRLPGALVTGGIIGALAWFLSGAIVLAFVAGAVALAFTLLG HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGLGAFGGRYIGGRSGGIAGRSNRDIFRGGGGGFGGGGASGRW CCHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC >Mature Secondary Structure MKAYLTALVFVMTSLAFAGSDACAEVPVPPLTARVVDQTGTLTGEQRSSIEQTLKDFETR CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC KGSQISVLIVPTTQPETIEQYSMRVVEQYKLGRAKVDDGALLIVAKNDRALRIEVGYGLE CCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEECCCEEEEEECCCCEEEEEECCCCC GALNDATSNRIIREVIVPKFKQGDFYGGIAAGVDSMIRVVEGEPLPAPQRRGESNGMAGL CCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHH LPALFVMAVLTGGVLRAILGRLPGALVTGGIIGALAWFLSGAIVLAFVAGAVALAFTLLG HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGLGAFGGRYIGGRSGGIAGRSNRDIFRGGGGGFGGGGASGRW CCHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]