Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is 186476799
Identifier: 186476799
GI number: 186476799
Start: 2294942
End: 2295340
Strand: Direct
Name: 186476799
Synonym: Bphy_2045
Alternate gene names: NA
Gene position: 2294942-2295340 (Clockwise)
Preceding gene: 186476798
Following gene: 186476800
Centisome position: 65.96
GC content: 55.89
Gene sequence:
>399_bases ATGAAAGACCGTTTTGCGAATCGAACTCTCGCCGTCTGCGCATTCGCCTGCCTGGGCCTCACCACCGGCATTGCATCCGC GCAGCAAGGAGCATCCATGCCGGGGATGGACATGAACAGCTCTTCTGCCGCGGAGGCATCCGGCTCAACGCCGGCATTCA AGGCCGCAGACCATAAAATGATGCAACACATGCAAGCGCCCTCCTATACGGGTGACGCGGACAAGGACTTCGTCGCGCAT ATGATTCCGCATCACCAAGGTGCCATCGATATGGCCGAAGTCGAACTCAAGTACGGCAAAGACCCCGAGATAAAGAAGCT CGCACGGAATATCGTTAAAGCACAGAAGGAAGAAATTGCGCTGATGCAGCGATGGCAGGCCAAACACGGCGGCAAATAA
Upstream 100 bases:
>100_bases ACGGGTAACGGACACGAACATCACGCGCACGGTAGCGAAGCATCTCGGGACGAGTCCCGTTCCCATCAAAGCCACTAAAG GCAACCATCAGGAGCTGAAC
Downstream 100 bases:
>100_bases TCGTGTCGCGTGAAGCCGGCACATGATTGAACGCTAGCGCATGTCGCCGCACGCGCTAGCCTCGAACCGGATTTGACGCG CAACATGTCGTCCGCGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MKDRFANRTLAVCAFACLGLTTGIASAQQGASMPGMDMNSSSAAEASGSTPAFKAADHKMMQHMQAPSYTGDADKDFVAH MIPHHQGAIDMAEVELKYGKDPEIKKLARNIVKAQKEEIALMQRWQAKHGGK
Sequences:
>Translated_132_residues MKDRFANRTLAVCAFACLGLTTGIASAQQGASMPGMDMNSSSAAEASGSTPAFKAADHKMMQHMQAPSYTGDADKDFVAH MIPHHQGAIDMAEVELKYGKDPEIKKLARNIVKAQKEEIALMQRWQAKHGGK >Mature_132_residues MKDRFANRTLAVCAFACLGLTTGIASAQQGASMPGMDMNSSSAAEASGSTPAFKAADHKMMQHMQAPSYTGDADKDFVAH MIPHHQGAIDMAEVELKYGKDPEIKKLARNIVKAQKEEIALMQRWQAKHGGK
Specific function: Unknown
COG id: COG3544
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14263; Mature: 14263
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 7.6 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 7.6 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDRFANRTLAVCAFACLGLTTGIASAQQGASMPGMDMNSSSAAEASGSTPAFKAADHKM CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH MQHMQAPSYTGDADKDFVAHMIPHHQGAIDMAEVELKYGKDPEIKKLARNIVKAQKEEIA HHHHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LMQRWQAKHGGK HHHHHHHHCCCC >Mature Secondary Structure MKDRFANRTLAVCAFACLGLTTGIASAQQGASMPGMDMNSSSAAEASGSTPAFKAADHKM CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH MQHMQAPSYTGDADKDFVAHMIPHHQGAIDMAEVELKYGKDPEIKKLARNIVKAQKEEIA HHHHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LMQRWQAKHGGK HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA