Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186476788

Identifier: 186476788

GI number: 186476788

Start: 2283990

End: 2285936

Strand: Direct

Name: 186476788

Synonym: Bphy_2033

Alternate gene names: NA

Gene position: 2283990-2285936 (Clockwise)

Preceding gene: 186476787

Following gene: 186476798

Centisome position: 65.65

GC content: 66.77

Gene sequence:

>1947_bases
ATGCAGCAGCAGAATCCCTCGAAGAAGTGGCGCTGGGGAGCGGCCGCCCTCTCGGCGCTATACGCGCTATGCGGAGCGTG
GGCGGCGCCCAGGCGCGCCGACCCGGCCATCGACACCGATACCGCGACGCCTCTTCCCGCCGGTTCGGCCGCCCCGCGCC
TGATCCGCAAGCTCGCCGCTTCGCGTGCGGCGCGATGGACGATCGCCATCGCGATTGTCTGCGCATGGTTGTTGCCCGGC
ACGCTCGGCCACGATCCGTGGAAGCAGGACGAGACCTACACGTTCGGCATCGTCCAGCACATGCTCGATACGGGCGACCT
CGTCGTGCCGACGAACGCGGGCCAGCCATTCGTCGAGAAGCCGCCCATCTACGACTGGGTTGCATCGGGCACGGCGTGGC
TCCTGAGCCGCTACCTGCCGCTGCACGATGGCGCACGCATTGCAAGCGCCCTCTTCGGGATGCTGACGCTGTTATGCCTT
GCGGGTCTCGCGCGGCGTTCGACGGACGCCGAACGCTGGTTTGATCTGCGCGTGATCGGTTCGCTTGCGTTGTTCGGGGG
AACGCTCGTCGTCGTCAAACATGCGCACGACATGATGACGGACGTCGCGCTAATGGCGGGCGCCGCGCTCGGCTTTTGCG
GACTGTTCGAACTGGTGCTGTCCGTTCAGGACGACGCATCGACGGGCACTGCCGATTCGCGCCGGCACGATCCGCAACGC
GACGCCCAGGCGGCCGGGATGTTCGGCGCCGGTGTCGGCATCGCGCTACTGTCGAAGGGACTGTTCGTGCCGCTCGTGTT
CGGTGCGACTCTTTGTGCGGCGCTCGCGCTCTACCCCGCTTGCCGGAGCAACGTGCGCTTCGCACGCGCGCTCGCGCTGG
CGGCATGCGTCTTCGCGCCGTTCGCGCTGATCTGGCCGCTCTGCTTTTACCTGCGCTCAGAGGCGCTGTTCAAGGTCTGG
CTGTGGGACAACAACGTCGGGCGGTTCTTCGGTTTCTCCGTGCCCGAACTGGGCTCGGAAAACGACAACCGGCTGTTCGT
GCTCAAGACGATGCTCACGGTCGGCTTTCCTGTCGTGCCGCTCGCGCTCGTCGCGCTTGCCGGAACGGCGCGCAGTGGAT
GGCGGCAACTGTGCGATCCGCGCATTGCGCTGCCGCTGGTCTTCGCGGGCACCGGCTTCGCAGTACTGCAAACCTCGGCA
ACCGTCCGCGAGTTGTACATCCTGCCGTTCATTGCGCCGCTCGCGCCGCTCGCCGTGCGCGCGATCGAACGGCTGCCGCA
GCGGATGCACACCGTATGGGATATGACAAGCCGCCTGCTGTTCGGCGTGCTTGCCGCGCTCGCGTGGATGATCTGGTCGA
CGATGACGAATCCCGCGGGCAACCGCGCATCGCTACATGCGCTGGGCCGCTGGCTCCCGCTCGACTGGACGCTGCCCGTC
CATCCCGTCGAAGTGGCCGCGGCGCTCGGGTTGACGGTCGGCTGGATGTGGCTGCTGCCGCTCATCCGGCACGCAGGCAA
ATGGCGCGGCGCCCTAAGCTGGTGTGCGGGTGCGATCGTCGCGTGGGGACTCGTCAGCACGCTGCTGCTGCCGTGGCTCG
ATGTGGCGAAAAGCTACCGATCCGTGTTCGAAGATCTGCGCACGCACCTCGCTGCGCAGTGGAACGACGGCGATTGCATG
GCAAGTCTCGCGCTCGGCGAATCGGAAGCCCCGATGCTGTATTACTTCGCCGGCATCGAGCATAGACCTTTGAATGCGTC
GAATACGGCGAGCCCGGCTGGCGATGCGCAGGCCTGCACCTGGCTGATCGTGCAAACGCGCCGTCAGGATCCCGCGCAAC
CGAGCGACGGCTGGCAGTTGTTCTGGTCAGGCGCACGTCCTGGCGACAACGACGAGTTGCTGCGTGTGTTCGTGCGCACG
CCGTCAGCCACGGGCGCCCGCGACTGA

Upstream 100 bases:

>100_bases
GATAAAATGAGACTAATCGTCCTCGAAACAGGGCGGACGTCATATCGATAAAAGGATCGTGGCCCACGTTGTCGCGTTCC
AAGGCCAGAGATCTTTCGTC

Downstream 100 bases:

>100_bases
ATCTGCGTTGGGCCGGAACGCATTAGAACGACGAGCCCGGCTCGCGCAGGAACGCAATCTCCTCGTCGGTCGACGGACGG
CCCAGCAGCGCATTGCGATG

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Inner Membrane Protein; Glycosyltransferase; 4-Amino-4-Deoxy-L-Arabinose Transferase; Inner Membrane Transmembrane Protein; Glycosyl Transferase Family; Glycosyltransferase Pmt Family

Number of amino acids: Translated: 648; Mature: 648

Protein sequence:

>648_residues
MQQQNPSKKWRWGAAALSALYALCGAWAAPRRADPAIDTDTATPLPAGSAAPRLIRKLAASRAARWTIAIAIVCAWLLPG
TLGHDPWKQDETYTFGIVQHMLDTGDLVVPTNAGQPFVEKPPIYDWVASGTAWLLSRYLPLHDGARIASALFGMLTLLCL
AGLARRSTDAERWFDLRVIGSLALFGGTLVVVKHAHDMMTDVALMAGAALGFCGLFELVLSVQDDASTGTADSRRHDPQR
DAQAAGMFGAGVGIALLSKGLFVPLVFGATLCAALALYPACRSNVRFARALALAACVFAPFALIWPLCFYLRSEALFKVW
LWDNNVGRFFGFSVPELGSENDNRLFVLKTMLTVGFPVVPLALVALAGTARSGWRQLCDPRIALPLVFAGTGFAVLQTSA
TVRELYILPFIAPLAPLAVRAIERLPQRMHTVWDMTSRLLFGVLAALAWMIWSTMTNPAGNRASLHALGRWLPLDWTLPV
HPVEVAAALGLTVGWMWLLPLIRHAGKWRGALSWCAGAIVAWGLVSTLLLPWLDVAKSYRSVFEDLRTHLAAQWNDGDCM
ASLALGESEAPMLYYFAGIEHRPLNASNTASPAGDAQACTWLIVQTRRQDPAQPSDGWQLFWSGARPGDNDELLRVFVRT
PSATGARD

Sequences:

>Translated_648_residues
MQQQNPSKKWRWGAAALSALYALCGAWAAPRRADPAIDTDTATPLPAGSAAPRLIRKLAASRAARWTIAIAIVCAWLLPG
TLGHDPWKQDETYTFGIVQHMLDTGDLVVPTNAGQPFVEKPPIYDWVASGTAWLLSRYLPLHDGARIASALFGMLTLLCL
AGLARRSTDAERWFDLRVIGSLALFGGTLVVVKHAHDMMTDVALMAGAALGFCGLFELVLSVQDDASTGTADSRRHDPQR
DAQAAGMFGAGVGIALLSKGLFVPLVFGATLCAALALYPACRSNVRFARALALAACVFAPFALIWPLCFYLRSEALFKVW
LWDNNVGRFFGFSVPELGSENDNRLFVLKTMLTVGFPVVPLALVALAGTARSGWRQLCDPRIALPLVFAGTGFAVLQTSA
TVRELYILPFIAPLAPLAVRAIERLPQRMHTVWDMTSRLLFGVLAALAWMIWSTMTNPAGNRASLHALGRWLPLDWTLPV
HPVEVAAALGLTVGWMWLLPLIRHAGKWRGALSWCAGAIVAWGLVSTLLLPWLDVAKSYRSVFEDLRTHLAAQWNDGDCM
ASLALGESEAPMLYYFAGIEHRPLNASNTASPAGDAQACTWLIVQTRRQDPAQPSDGWQLFWSGARPGDNDELLRVFVRT
PSATGARD
>Mature_648_residues
MQQQNPSKKWRWGAAALSALYALCGAWAAPRRADPAIDTDTATPLPAGSAAPRLIRKLAASRAARWTIAIAIVCAWLLPG
TLGHDPWKQDETYTFGIVQHMLDTGDLVVPTNAGQPFVEKPPIYDWVASGTAWLLSRYLPLHDGARIASALFGMLTLLCL
AGLARRSTDAERWFDLRVIGSLALFGGTLVVVKHAHDMMTDVALMAGAALGFCGLFELVLSVQDDASTGTADSRRHDPQR
DAQAAGMFGAGVGIALLSKGLFVPLVFGATLCAALALYPACRSNVRFARALALAACVFAPFALIWPLCFYLRSEALFKVW
LWDNNVGRFFGFSVPELGSENDNRLFVLKTMLTVGFPVVPLALVALAGTARSGWRQLCDPRIALPLVFAGTGFAVLQTSA
TVRELYILPFIAPLAPLAVRAIERLPQRMHTVWDMTSRLLFGVLAALAWMIWSTMTNPAGNRASLHALGRWLPLDWTLPV
HPVEVAAALGLTVGWMWLLPLIRHAGKWRGALSWCAGAIVAWGLVSTLLLPWLDVAKSYRSVFEDLRTHLAAQWNDGDCM
ASLALGESEAPMLYYFAGIEHRPLNASNTASPAGDAQACTWLIVQTRRQDPAQPSDGWQLFWSGARPGDNDELLRVFVRT
PSATGARD

Specific function: Unknown

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70413; Mature: 70413

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQQNPSKKWRWGAAALSALYALCGAWAAPRRADPAIDTDTATPLPAGSAAPRLIRKLAA
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
SRAARWTIAIAIVCAWLLPGTLGHDPWKQDETYTFGIVQHMLDTGDLVVPTNAGQPFVEK
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCC
PPIYDWVASGTAWLLSRYLPLHDGARIASALFGMLTLLCLAGLARRSTDAERWFDLRVIG
CCCHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SLALFGGTLVVVKHAHDMMTDVALMAGAALGFCGLFELVLSVQDDASTGTADSRRHDPQR
HHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
DAQAAGMFGAGVGIALLSKGLFVPLVFGATLCAALALYPACRSNVRFARALALAACVFAP
HHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FALIWPLCFYLRSEALFKVWLWDNNVGRFFGFSVPELGSENDNRLFVLKTMLTVGFPVVP
HHHHHHHHHHHHHHHEEEEEEEECCCCHHCCCCCCCCCCCCCCEEEEHHHHHHHCCCHHH
LALVALAGTARSGWRQLCDPRIALPLVFAGTGFAVLQTSATVRELYILPFIAPLAPLAVR
HHHHHHHCCCHHHHHHHCCCCCCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AIERLPQRMHTVWDMTSRLLFGVLAALAWMIWSTMTNPAGNRASLHALGRWLPLDWTLPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCC
HPVEVAAALGLTVGWMWLLPLIRHAGKWRGALSWCAGAIVAWGLVSTLLLPWLDVAKSYR
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVFEDLRTHLAAQWNDGDCMASLALGESEAPMLYYFAGIEHRPLNASNTASPAGDAQACT
HHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHH
WLIVQTRRQDPAQPSDGWQLFWSGARPGDNDELLRVFVRTPSATGARD
HHEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHEEECCCCCCCCC
>Mature Secondary Structure
MQQQNPSKKWRWGAAALSALYALCGAWAAPRRADPAIDTDTATPLPAGSAAPRLIRKLAA
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
SRAARWTIAIAIVCAWLLPGTLGHDPWKQDETYTFGIVQHMLDTGDLVVPTNAGQPFVEK
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCC
PPIYDWVASGTAWLLSRYLPLHDGARIASALFGMLTLLCLAGLARRSTDAERWFDLRVIG
CCCHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SLALFGGTLVVVKHAHDMMTDVALMAGAALGFCGLFELVLSVQDDASTGTADSRRHDPQR
HHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
DAQAAGMFGAGVGIALLSKGLFVPLVFGATLCAALALYPACRSNVRFARALALAACVFAP
HHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FALIWPLCFYLRSEALFKVWLWDNNVGRFFGFSVPELGSENDNRLFVLKTMLTVGFPVVP
HHHHHHHHHHHHHHHEEEEEEEECCCCHHCCCCCCCCCCCCCCEEEEHHHHHHHCCCHHH
LALVALAGTARSGWRQLCDPRIALPLVFAGTGFAVLQTSATVRELYILPFIAPLAPLAVR
HHHHHHHCCCHHHHHHHCCCCCCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AIERLPQRMHTVWDMTSRLLFGVLAALAWMIWSTMTNPAGNRASLHALGRWLPLDWTLPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCC
HPVEVAAALGLTVGWMWLLPLIRHAGKWRGALSWCAGAIVAWGLVSTLLLPWLDVAKSYR
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVFEDLRTHLAAQWNDGDCMASLALGESEAPMLYYFAGIEHRPLNASNTASPAGDAQACT
HHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHH
WLIVQTRRQDPAQPSDGWQLFWSGARPGDNDELLRVFVRTPSATGARD
HHEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA