Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is 186476788
Identifier: 186476788
GI number: 186476788
Start: 2283990
End: 2285936
Strand: Direct
Name: 186476788
Synonym: Bphy_2033
Alternate gene names: NA
Gene position: 2283990-2285936 (Clockwise)
Preceding gene: 186476787
Following gene: 186476798
Centisome position: 65.65
GC content: 66.77
Gene sequence:
>1947_bases ATGCAGCAGCAGAATCCCTCGAAGAAGTGGCGCTGGGGAGCGGCCGCCCTCTCGGCGCTATACGCGCTATGCGGAGCGTG GGCGGCGCCCAGGCGCGCCGACCCGGCCATCGACACCGATACCGCGACGCCTCTTCCCGCCGGTTCGGCCGCCCCGCGCC TGATCCGCAAGCTCGCCGCTTCGCGTGCGGCGCGATGGACGATCGCCATCGCGATTGTCTGCGCATGGTTGTTGCCCGGC ACGCTCGGCCACGATCCGTGGAAGCAGGACGAGACCTACACGTTCGGCATCGTCCAGCACATGCTCGATACGGGCGACCT CGTCGTGCCGACGAACGCGGGCCAGCCATTCGTCGAGAAGCCGCCCATCTACGACTGGGTTGCATCGGGCACGGCGTGGC TCCTGAGCCGCTACCTGCCGCTGCACGATGGCGCACGCATTGCAAGCGCCCTCTTCGGGATGCTGACGCTGTTATGCCTT GCGGGTCTCGCGCGGCGTTCGACGGACGCCGAACGCTGGTTTGATCTGCGCGTGATCGGTTCGCTTGCGTTGTTCGGGGG AACGCTCGTCGTCGTCAAACATGCGCACGACATGATGACGGACGTCGCGCTAATGGCGGGCGCCGCGCTCGGCTTTTGCG GACTGTTCGAACTGGTGCTGTCCGTTCAGGACGACGCATCGACGGGCACTGCCGATTCGCGCCGGCACGATCCGCAACGC GACGCCCAGGCGGCCGGGATGTTCGGCGCCGGTGTCGGCATCGCGCTACTGTCGAAGGGACTGTTCGTGCCGCTCGTGTT CGGTGCGACTCTTTGTGCGGCGCTCGCGCTCTACCCCGCTTGCCGGAGCAACGTGCGCTTCGCACGCGCGCTCGCGCTGG CGGCATGCGTCTTCGCGCCGTTCGCGCTGATCTGGCCGCTCTGCTTTTACCTGCGCTCAGAGGCGCTGTTCAAGGTCTGG CTGTGGGACAACAACGTCGGGCGGTTCTTCGGTTTCTCCGTGCCCGAACTGGGCTCGGAAAACGACAACCGGCTGTTCGT GCTCAAGACGATGCTCACGGTCGGCTTTCCTGTCGTGCCGCTCGCGCTCGTCGCGCTTGCCGGAACGGCGCGCAGTGGAT GGCGGCAACTGTGCGATCCGCGCATTGCGCTGCCGCTGGTCTTCGCGGGCACCGGCTTCGCAGTACTGCAAACCTCGGCA ACCGTCCGCGAGTTGTACATCCTGCCGTTCATTGCGCCGCTCGCGCCGCTCGCCGTGCGCGCGATCGAACGGCTGCCGCA GCGGATGCACACCGTATGGGATATGACAAGCCGCCTGCTGTTCGGCGTGCTTGCCGCGCTCGCGTGGATGATCTGGTCGA CGATGACGAATCCCGCGGGCAACCGCGCATCGCTACATGCGCTGGGCCGCTGGCTCCCGCTCGACTGGACGCTGCCCGTC CATCCCGTCGAAGTGGCCGCGGCGCTCGGGTTGACGGTCGGCTGGATGTGGCTGCTGCCGCTCATCCGGCACGCAGGCAA ATGGCGCGGCGCCCTAAGCTGGTGTGCGGGTGCGATCGTCGCGTGGGGACTCGTCAGCACGCTGCTGCTGCCGTGGCTCG ATGTGGCGAAAAGCTACCGATCCGTGTTCGAAGATCTGCGCACGCACCTCGCTGCGCAGTGGAACGACGGCGATTGCATG GCAAGTCTCGCGCTCGGCGAATCGGAAGCCCCGATGCTGTATTACTTCGCCGGCATCGAGCATAGACCTTTGAATGCGTC GAATACGGCGAGCCCGGCTGGCGATGCGCAGGCCTGCACCTGGCTGATCGTGCAAACGCGCCGTCAGGATCCCGCGCAAC CGAGCGACGGCTGGCAGTTGTTCTGGTCAGGCGCACGTCCTGGCGACAACGACGAGTTGCTGCGTGTGTTCGTGCGCACG CCGTCAGCCACGGGCGCCCGCGACTGA
Upstream 100 bases:
>100_bases GATAAAATGAGACTAATCGTCCTCGAAACAGGGCGGACGTCATATCGATAAAAGGATCGTGGCCCACGTTGTCGCGTTCC AAGGCCAGAGATCTTTCGTC
Downstream 100 bases:
>100_bases ATCTGCGTTGGGCCGGAACGCATTAGAACGACGAGCCCGGCTCGCGCAGGAACGCAATCTCCTCGTCGGTCGACGGACGG CCCAGCAGCGCATTGCGATG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Inner Membrane Protein; Glycosyltransferase; 4-Amino-4-Deoxy-L-Arabinose Transferase; Inner Membrane Transmembrane Protein; Glycosyl Transferase Family; Glycosyltransferase Pmt Family
Number of amino acids: Translated: 648; Mature: 648
Protein sequence:
>648_residues MQQQNPSKKWRWGAAALSALYALCGAWAAPRRADPAIDTDTATPLPAGSAAPRLIRKLAASRAARWTIAIAIVCAWLLPG TLGHDPWKQDETYTFGIVQHMLDTGDLVVPTNAGQPFVEKPPIYDWVASGTAWLLSRYLPLHDGARIASALFGMLTLLCL AGLARRSTDAERWFDLRVIGSLALFGGTLVVVKHAHDMMTDVALMAGAALGFCGLFELVLSVQDDASTGTADSRRHDPQR DAQAAGMFGAGVGIALLSKGLFVPLVFGATLCAALALYPACRSNVRFARALALAACVFAPFALIWPLCFYLRSEALFKVW LWDNNVGRFFGFSVPELGSENDNRLFVLKTMLTVGFPVVPLALVALAGTARSGWRQLCDPRIALPLVFAGTGFAVLQTSA TVRELYILPFIAPLAPLAVRAIERLPQRMHTVWDMTSRLLFGVLAALAWMIWSTMTNPAGNRASLHALGRWLPLDWTLPV HPVEVAAALGLTVGWMWLLPLIRHAGKWRGALSWCAGAIVAWGLVSTLLLPWLDVAKSYRSVFEDLRTHLAAQWNDGDCM ASLALGESEAPMLYYFAGIEHRPLNASNTASPAGDAQACTWLIVQTRRQDPAQPSDGWQLFWSGARPGDNDELLRVFVRT PSATGARD
Sequences:
>Translated_648_residues MQQQNPSKKWRWGAAALSALYALCGAWAAPRRADPAIDTDTATPLPAGSAAPRLIRKLAASRAARWTIAIAIVCAWLLPG TLGHDPWKQDETYTFGIVQHMLDTGDLVVPTNAGQPFVEKPPIYDWVASGTAWLLSRYLPLHDGARIASALFGMLTLLCL AGLARRSTDAERWFDLRVIGSLALFGGTLVVVKHAHDMMTDVALMAGAALGFCGLFELVLSVQDDASTGTADSRRHDPQR DAQAAGMFGAGVGIALLSKGLFVPLVFGATLCAALALYPACRSNVRFARALALAACVFAPFALIWPLCFYLRSEALFKVW LWDNNVGRFFGFSVPELGSENDNRLFVLKTMLTVGFPVVPLALVALAGTARSGWRQLCDPRIALPLVFAGTGFAVLQTSA TVRELYILPFIAPLAPLAVRAIERLPQRMHTVWDMTSRLLFGVLAALAWMIWSTMTNPAGNRASLHALGRWLPLDWTLPV HPVEVAAALGLTVGWMWLLPLIRHAGKWRGALSWCAGAIVAWGLVSTLLLPWLDVAKSYRSVFEDLRTHLAAQWNDGDCM ASLALGESEAPMLYYFAGIEHRPLNASNTASPAGDAQACTWLIVQTRRQDPAQPSDGWQLFWSGARPGDNDELLRVFVRT PSATGARD >Mature_648_residues MQQQNPSKKWRWGAAALSALYALCGAWAAPRRADPAIDTDTATPLPAGSAAPRLIRKLAASRAARWTIAIAIVCAWLLPG TLGHDPWKQDETYTFGIVQHMLDTGDLVVPTNAGQPFVEKPPIYDWVASGTAWLLSRYLPLHDGARIASALFGMLTLLCL AGLARRSTDAERWFDLRVIGSLALFGGTLVVVKHAHDMMTDVALMAGAALGFCGLFELVLSVQDDASTGTADSRRHDPQR DAQAAGMFGAGVGIALLSKGLFVPLVFGATLCAALALYPACRSNVRFARALALAACVFAPFALIWPLCFYLRSEALFKVW LWDNNVGRFFGFSVPELGSENDNRLFVLKTMLTVGFPVVPLALVALAGTARSGWRQLCDPRIALPLVFAGTGFAVLQTSA TVRELYILPFIAPLAPLAVRAIERLPQRMHTVWDMTSRLLFGVLAALAWMIWSTMTNPAGNRASLHALGRWLPLDWTLPV HPVEVAAALGLTVGWMWLLPLIRHAGKWRGALSWCAGAIVAWGLVSTLLLPWLDVAKSYRSVFEDLRTHLAAQWNDGDCM ASLALGESEAPMLYYFAGIEHRPLNASNTASPAGDAQACTWLIVQTRRQDPAQPSDGWQLFWSGARPGDNDELLRVFVRT PSATGARD
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70413; Mature: 70413
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQQNPSKKWRWGAAALSALYALCGAWAAPRRADPAIDTDTATPLPAGSAAPRLIRKLAA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH SRAARWTIAIAIVCAWLLPGTLGHDPWKQDETYTFGIVQHMLDTGDLVVPTNAGQPFVEK HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCC PPIYDWVASGTAWLLSRYLPLHDGARIASALFGMLTLLCLAGLARRSTDAERWFDLRVIG CCCHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH SLALFGGTLVVVKHAHDMMTDVALMAGAALGFCGLFELVLSVQDDASTGTADSRRHDPQR HHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH DAQAAGMFGAGVGIALLSKGLFVPLVFGATLCAALALYPACRSNVRFARALALAACVFAP HHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FALIWPLCFYLRSEALFKVWLWDNNVGRFFGFSVPELGSENDNRLFVLKTMLTVGFPVVP HHHHHHHHHHHHHHHEEEEEEEECCCCHHCCCCCCCCCCCCCCEEEEHHHHHHHCCCHHH LALVALAGTARSGWRQLCDPRIALPLVFAGTGFAVLQTSATVRELYILPFIAPLAPLAVR HHHHHHHCCCHHHHHHHCCCCCCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH AIERLPQRMHTVWDMTSRLLFGVLAALAWMIWSTMTNPAGNRASLHALGRWLPLDWTLPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCC HPVEVAAALGLTVGWMWLLPLIRHAGKWRGALSWCAGAIVAWGLVSTLLLPWLDVAKSYR CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVFEDLRTHLAAQWNDGDCMASLALGESEAPMLYYFAGIEHRPLNASNTASPAGDAQACT HHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHH WLIVQTRRQDPAQPSDGWQLFWSGARPGDNDELLRVFVRTPSATGARD HHEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHEEECCCCCCCCC >Mature Secondary Structure MQQQNPSKKWRWGAAALSALYALCGAWAAPRRADPAIDTDTATPLPAGSAAPRLIRKLAA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH SRAARWTIAIAIVCAWLLPGTLGHDPWKQDETYTFGIVQHMLDTGDLVVPTNAGQPFVEK HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCC PPIYDWVASGTAWLLSRYLPLHDGARIASALFGMLTLLCLAGLARRSTDAERWFDLRVIG CCCHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH SLALFGGTLVVVKHAHDMMTDVALMAGAALGFCGLFELVLSVQDDASTGTADSRRHDPQR HHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH DAQAAGMFGAGVGIALLSKGLFVPLVFGATLCAALALYPACRSNVRFARALALAACVFAP HHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FALIWPLCFYLRSEALFKVWLWDNNVGRFFGFSVPELGSENDNRLFVLKTMLTVGFPVVP HHHHHHHHHHHHHHHEEEEEEEECCCCHHCCCCCCCCCCCCCCEEEEHHHHHHHCCCHHH LALVALAGTARSGWRQLCDPRIALPLVFAGTGFAVLQTSATVRELYILPFIAPLAPLAVR HHHHHHHCCCHHHHHHHCCCCCCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH AIERLPQRMHTVWDMTSRLLFGVLAALAWMIWSTMTNPAGNRASLHALGRWLPLDWTLPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCC HPVEVAAALGLTVGWMWLLPLIRHAGKWRGALSWCAGAIVAWGLVSTLLLPWLDVAKSYR CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVFEDLRTHLAAQWNDGDCMASLALGESEAPMLYYFAGIEHRPLNASNTASPAGDAQACT HHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHH WLIVQTRRQDPAQPSDGWQLFWSGARPGDNDELLRVFVRTPSATGARD HHEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA