Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186476781

Identifier: 186476781

GI number: 186476781

Start: 2277634

End: 2278167

Strand: Direct

Name: 186476781

Synonym: Bphy_2026

Alternate gene names: NA

Gene position: 2277634-2278167 (Clockwise)

Preceding gene: 186476780

Following gene: 186476782

Centisome position: 65.46

GC content: 64.23

Gene sequence:

>534_bases
GTGTCCACTTCCGTCGACTCCGCAGCCGTGCCGCCCCCACGCGAATCCTTAGAACCCGCTGTGCCGACTGTGCGCCGGCG
GCTCGCCACGTTGATGTACGAAGGCGTGCTGCTGTTCGGCGTCGTTTTCTTCGCGGGATATCTGTTCAGCACGCTCACGC
AGCAGCGCAACGGGCTCGTGCATCACAGCTGGCTCGCCGCGTGGGTGGGCCTCGTAGTCGGCGTGTATTTCGTGTGGTTC
TGGACGCACGGCGGCCAAACCCTGCCGATGAAGACCTGGCGCTTGCGGGTGGTGCGCGCGAGGGATGGCGCGAAGGTTTC
CGTGGCACGTGCTGTTTCGCGATATGTGTTCGCGTGGCTGTGGTTCTTGCCGCCGTTGGCTTTGCATCCTCTGCTTGGCC
TCGCTGTGCCGCAGACGCTCGTGCTTGCCGGTGGGTGGTTTGTTCTTTATGCCGCGGGCGCAAGGATAGGGGTCGGGCGG
CAGTTTCTTCATGATCGGCTTGCCGGGACCAAGGTCGTTGCCGTCGGCCGATGA

Upstream 100 bases:

>100_bases
AGTCTCGCCTTCCGAGGCTCCTTCCATCTTCAACGGCTCATAATCCATTCCAGGGAGCCGGCATCGTGCGGGCTCATCAA
CGGCAACCGAGGCTCAGCCC

Downstream 100 bases:

>100_bases
GTTTTTTTTGCCTGCGGCGCAGTCGATGAATTTGTCTGCCGCGCGTCGATGCCGGTTTCCGGTTTTTCGCTTTCACTGGC
ATGCGCGCTTCTGGTTTGCG

Product: RDD domain-containing protein

Products: NA

Alternate protein names: RDD Domain Containing Protein; RDD Family Protein; Transmembrane Protein; RDD Family; RDD Family Membrane Protein; RDD Domain Protein

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSTSVDSAAVPPPRESLEPAVPTVRRRLATLMYEGVLLFGVVFFAGYLFSTLTQQRNGLVHHSWLAAWVGLVVGVYFVWF
WTHGGQTLPMKTWRLRVVRARDGAKVSVARAVSRYVFAWLWFLPPLALHPLLGLAVPQTLVLAGGWFVLYAAGARIGVGR
QFLHDRLAGTKVVAVGR

Sequences:

>Translated_177_residues
MSTSVDSAAVPPPRESLEPAVPTVRRRLATLMYEGVLLFGVVFFAGYLFSTLTQQRNGLVHHSWLAAWVGLVVGVYFVWF
WTHGGQTLPMKTWRLRVVRARDGAKVSVARAVSRYVFAWLWFLPPLALHPLLGLAVPQTLVLAGGWFVLYAAGARIGVGR
QFLHDRLAGTKVVAVGR
>Mature_176_residues
STSVDSAAVPPPRESLEPAVPTVRRRLATLMYEGVLLFGVVFFAGYLFSTLTQQRNGLVHHSWLAAWVGLVVGVYFVWFW
THGGQTLPMKTWRLRVVRARDGAKVSVARAVSRYVFAWLWFLPPLALHPLLGLAVPQTLVLAGGWFVLYAAGARIGVGRQ
FLHDRLAGTKVVAVGR

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19566; Mature: 19435

Theoretical pI: Translated: 11.95; Mature: 11.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSVDSAAVPPPRESLEPAVPTVRRRLATLMYEGVLLFGVVFFAGYLFSTLTQQRNGLV
CCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
HHSWLAAWVGLVVGVYFVWFWTHGGQTLPMKTWRLRVVRARDGAKVSVARAVSRYVFAWL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEEECCCCCHHHHHHHHHHHHHHHH
WFLPPLALHPLLGLAVPQTLVLAGGWFVLYAAGARIGVGRQFLHDRLAGTKVVAVGR
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECC
>Mature Secondary Structure 
STSVDSAAVPPPRESLEPAVPTVRRRLATLMYEGVLLFGVVFFAGYLFSTLTQQRNGLV
CCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
HHSWLAAWVGLVVGVYFVWFWTHGGQTLPMKTWRLRVVRARDGAKVSVARAVSRYVFAWL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEEECCCCCHHHHHHHHHHHHHHHH
WFLPPLALHPLLGLAVPQTLVLAGGWFVLYAAGARIGVGRQFLHDRLAGTKVVAVGR
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA