Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is 186476669
Identifier: 186476669
GI number: 186476669
Start: 2161029
End: 2161859
Strand: Direct
Name: 186476669
Synonym: Bphy_1914
Alternate gene names: NA
Gene position: 2161029-2161859 (Clockwise)
Preceding gene: 186476668
Following gene: 186476670
Centisome position: 62.11
GC content: 62.33
Gene sequence:
>831_bases ATGCTCAACGATTTCCAAGGCGAACGCGACGTCGCCGCTGTGCTGGCCGCTGGCACCTCCCTCGCAGGTGCACAGAAAAG CCCCCTGCAAGATGGCAAGCCGTTCGTCATCGTTCCGGACGGCTATAAGGCGCAGATTGTCGACGAAGTGTTCGGCAATC CGGCGCGCGCAAGCGGTCTCGTGAAGCTCCGCGACGCGAACAGCTTCGTGTCCTACTTCAACCGCCAGAAGCGTCCCGAA AGTCTGATCTACGCATCGCTCGACCCGGCAAAGATCCTCGGCGTGATCGACGATCACCGCGCATATAGCACGGTATCGCA GGGCGACGGCGCTAACTGGCGCGGCTATCGCGTCGAGTTCGCTGTGCCGGCCTCGCGCGAGTGGAAGGTCTGGACGGGCT CCGATCGCAAGGGTCTCAACCAACTCCAGTTCGCCGAGCTGATCGAAGACAACCTGCCCGACATCGTGTCGCCGGATGGC TCGACGATGCTCAGCGTCGCGCTCAACTTCGAGGCGAGCAAGGAGGGCAACTTCGTGTCGGCCGCGCGCCTGCAGGACGG CAGCACGAACTTCGTCTGGAAGGAAGACGTGAACGCCACCGGCAACAAGGTCGCGATGCCGTCGCAGATCACGCTCGAAA TCCCCGTGTTCGAGAACGGCCAGCCGTCGCCCGTCGAGGCACGCATCAAGTACCGCATCAAAGACGGCAATCTGACCATC TGGTACGAGCTCGTGCGCCCGCACAAGGTGCTCGAAACCGCTTTCCGCGCCATCTGGTCGCAAATCGAAGAGCAGACGGC AACGACGATCCTGCTGGGTTCCCCCGAGTAA
Upstream 100 bases:
>100_bases AGCTGCCTGGCATCTCGCTGGCAGACACTCCCAGCCCCCGCGTGTCGCTCGGCTAATCGCGCGGCAAACCTCCCACCACC AATACCAAAACGGATAAGAC
Downstream 100 bases:
>100_bases CTGCGAGTGCGGCGGCTCCCCGAGCCAGCGCTTTGAGGGTGCGGTCCCGGCCCTCTCTTTTTGAATCGAAGGCTCTGCCG CAGCCAAAGGTCTGTCCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MLNDFQGERDVAAVLAAGTSLAGAQKSPLQDGKPFVIVPDGYKAQIVDEVFGNPARASGLVKLRDANSFVSYFNRQKRPE SLIYASLDPAKILGVIDDHRAYSTVSQGDGANWRGYRVEFAVPASREWKVWTGSDRKGLNQLQFAELIEDNLPDIVSPDG STMLSVALNFEASKEGNFVSAARLQDGSTNFVWKEDVNATGNKVAMPSQITLEIPVFENGQPSPVEARIKYRIKDGNLTI WYELVRPHKVLETAFRAIWSQIEEQTATTILLGSPE
Sequences:
>Translated_276_residues MLNDFQGERDVAAVLAAGTSLAGAQKSPLQDGKPFVIVPDGYKAQIVDEVFGNPARASGLVKLRDANSFVSYFNRQKRPE SLIYASLDPAKILGVIDDHRAYSTVSQGDGANWRGYRVEFAVPASREWKVWTGSDRKGLNQLQFAELIEDNLPDIVSPDG STMLSVALNFEASKEGNFVSAARLQDGSTNFVWKEDVNATGNKVAMPSQITLEIPVFENGQPSPVEARIKYRIKDGNLTI WYELVRPHKVLETAFRAIWSQIEEQTATTILLGSPE >Mature_276_residues MLNDFQGERDVAAVLAAGTSLAGAQKSPLQDGKPFVIVPDGYKAQIVDEVFGNPARASGLVKLRDANSFVSYFNRQKRPE SLIYASLDPAKILGVIDDHRAYSTVSQGDGANWRGYRVEFAVPASREWKVWTGSDRKGLNQLQFAELIEDNLPDIVSPDG STMLSVALNFEASKEGNFVSAARLQDGSTNFVWKEDVNATGNKVAMPSQITLEIPVFENGQPSPVEARIKYRIKDGNLTI WYELVRPHKVLETAFRAIWSQIEEQTATTILLGSPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30418; Mature: 30418
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNDFQGERDVAAVLAAGTSLAGAQKSPLQDGKPFVIVPDGYKAQIVDEVFGNPARASGL CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCE VKLRDANSFVSYFNRQKRPESLIYASLDPAKILGVIDDHRAYSTVSQGDGANWRGYRVEF EEEECCHHHHHHHHHCCCCCCEEEECCCHHHEEEEECCCHHHHHHCCCCCCCCCEEEEEE AVPASREWKVWTGSDRKGLNQLQFAELIEDNLPDIVSPDGSTMLSVALNFEASKEGNFVS ECCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCEEE AARLQDGSTNFVWKEDVNATGNKVAMPSQITLEIPVFENGQPSPVEARIKYRIKDGNLTI EEEECCCCCCEEECCCCCCCCCEEECCCEEEEEEEEECCCCCCCEEEEEEEEEECCCEEE WYELVRPHKVLETAFRAIWSQIEEQTATTILLGSPE EEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCC >Mature Secondary Structure MLNDFQGERDVAAVLAAGTSLAGAQKSPLQDGKPFVIVPDGYKAQIVDEVFGNPARASGL CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCE VKLRDANSFVSYFNRQKRPESLIYASLDPAKILGVIDDHRAYSTVSQGDGANWRGYRVEF EEEECCHHHHHHHHHCCCCCCEEEECCCHHHEEEEECCCHHHHHHCCCCCCCCCEEEEEE AVPASREWKVWTGSDRKGLNQLQFAELIEDNLPDIVSPDGSTMLSVALNFEASKEGNFVS ECCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCEEE AARLQDGSTNFVWKEDVNATGNKVAMPSQITLEIPVFENGQPSPVEARIKYRIKDGNLTI EEEECCCCCCEEECCCCCCCCCEEECCCEEEEEEEEECCCCCCCEEEEEEEEEECCCEEE WYELVRPHKVLETAFRAIWSQIEEQTATTILLGSPE EEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA