Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is 186476621
Identifier: 186476621
GI number: 186476621
Start: 2125761
End: 2126453
Strand: Direct
Name: 186476621
Synonym: Bphy_1866
Alternate gene names: NA
Gene position: 2125761-2126453 (Clockwise)
Preceding gene: 186476620
Following gene: 186476622
Centisome position: 61.1
GC content: 63.78
Gene sequence:
>693_bases ATGTCACTTGGCTGCGCGGCAGCAGCTGCGCACGCGGATGTGATTGATGACTACGTTGCCCGCCCCTTCGGAATTCATTT TCAGGCCGGCATCGGCATCAGCAAGGCCGACACTCCCGACGGCCGATGGCAGCAAGCAGGCATTCCGGGCGGCTCGCACG TCACGGCGAAACCGCCGACCTTCTCGCTCGGTCTCACTGGTCCCGTCCTCACGCGTGGCGCATGGGGCGTCGACTGGCAT CTCGATTATGTGAATCTCGGGCGCTTCGCGGCGTCTTGCTCCTGCACGCCTCAGGACGAGAACTACGATCCCGGCTCGCA CACGTACGCGAACAAAACAGGGGTCCCGACCGCATACTTCACGGGCGAAGGTCGCTCGCAAGGCGCGGCGTTGACCGCCG AGGCATATTACTGGCTATATGGCATGCGGCTCGGCGCCGAGGTCGGCGCGTATGTCCACCGCGATTCGTGGTCGGAGGAC ATCGCCGGCTGGCAGGTTGGCGGCGTACCGCCGCAGACCCTGCACCTCTCGGACGCCTATTGGTCAGTCGCGCCCGTCAT CGGAGTATCGGTCGGATACGGCCGCGTGAGCGTCGCGGCGCGTCACTACTTCACTGGCCTGAACAGCCGCAATCGAAACG TGCCGCCGCTCTGGAACGACGTCACGACAGTGGAACTCAAGGTTAAGTTCTAA
Upstream 100 bases:
>100_bases TCGAATTGGACAAGGAAACCCTCGAGCGCATCTTCGAAAGGATGCGCCGGGCCGGAGCCGAGTTCAGCCCGGTGCCAGAT GGAGAACAGCAGCCGTAGCA
Downstream 100 bases:
>100_bases CTTTCTGTTATTTGATACACTGCGCGGACATTAAATGTAACGCAGCGTAAGAATGACTGAAACCGCGAACCCGAGCCGCC TTGTACCAAACAAGGCGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MSLGCAAAAAHADVIDDYVARPFGIHFQAGIGISKADTPDGRWQQAGIPGGSHVTAKPPTFSLGLTGPVLTRGAWGVDWH LDYVNLGRFAASCSCTPQDENYDPGSHTYANKTGVPTAYFTGEGRSQGAALTAEAYYWLYGMRLGAEVGAYVHRDSWSED IAGWQVGGVPPQTLHLSDAYWSVAPVIGVSVGYGRVSVAARHYFTGLNSRNRNVPPLWNDVTTVELKVKF
Sequences:
>Translated_230_residues MSLGCAAAAAHADVIDDYVARPFGIHFQAGIGISKADTPDGRWQQAGIPGGSHVTAKPPTFSLGLTGPVLTRGAWGVDWH LDYVNLGRFAASCSCTPQDENYDPGSHTYANKTGVPTAYFTGEGRSQGAALTAEAYYWLYGMRLGAEVGAYVHRDSWSED IAGWQVGGVPPQTLHLSDAYWSVAPVIGVSVGYGRVSVAARHYFTGLNSRNRNVPPLWNDVTTVELKVKF >Mature_229_residues SLGCAAAAAHADVIDDYVARPFGIHFQAGIGISKADTPDGRWQQAGIPGGSHVTAKPPTFSLGLTGPVLTRGAWGVDWHL DYVNLGRFAASCSCTPQDENYDPGSHTYANKTGVPTAYFTGEGRSQGAALTAEAYYWLYGMRLGAEVGAYVHRDSWSEDI AGWQVGGVPPQTLHLSDAYWSVAPVIGVSVGYGRVSVAARHYFTGLNSRNRNVPPLWNDVTTVELKVKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24648; Mature: 24516
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLGCAAAAAHADVIDDYVARPFGIHFQAGIGISKADTPDGRWQQAGIPGGSHVTAKPPT CCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEECCCCCCCEEEECCCE FSLGLTGPVLTRGAWGVDWHLDYVNLGRFAASCSCTPQDENYDPGSHTYANKTGVPTAYF EEECCCCHHHHCCCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEE TGEGRSQGAALTAEAYYWLYGMRLGAEVGAYVHRDSWSEDIAGWQVGGVPPQTLHLSDAY ECCCCCCCCEEEHHHEEEEEHHHHCCHHCCEEECCCCCCCCCCEEECCCCCCEEEECCCH WSVAPVIGVSVGYGRVSVAARHYFTGLNSRNRNVPPLWNDVTTVELKVKF HHHHHHEEEECCCCCEEHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEC >Mature Secondary Structure SLGCAAAAAHADVIDDYVARPFGIHFQAGIGISKADTPDGRWQQAGIPGGSHVTAKPPT CCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEECCCCCCCEEEECCCE FSLGLTGPVLTRGAWGVDWHLDYVNLGRFAASCSCTPQDENYDPGSHTYANKTGVPTAYF EEECCCCHHHHCCCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEE TGEGRSQGAALTAEAYYWLYGMRLGAEVGAYVHRDSWSEDIAGWQVGGVPPQTLHLSDAY ECCCCCCCCEEEHHHEEEEEHHHHCCHHCCEEECCCCCCCCCCEEECCCCCCEEEECCCH WSVAPVIGVSVGYGRVSVAARHYFTGLNSRNRNVPPLWNDVTTVELKVKF HHHHHHEEEECCCCCEEHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA