Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is 186476047
Identifier: 186476047
GI number: 186476047
Start: 1445431
End: 1446525
Strand: Reverse
Name: 186476047
Synonym: Bphy_1288
Alternate gene names: NA
Gene position: 1446525-1445431 (Counterclockwise)
Preceding gene: 186476048
Following gene: 186476045
Centisome position: 41.58
GC content: 60.91
Gene sequence:
>1095_bases ATGAAAAAAAGGACCATGCTGAGCGCGCTGACGCTCGCGGCGGCGTCGTTCGTCGCGAGCGGCGCGCTGATGCCGACGGC GCAGGCTGCCGACGTGCCTGGCGTCGCCTTCGTCTACCTCGGCAATCCGGGCGATGCAGGCTGGACCTACGCGCATGACC AGGGCTCGAAAGAAGCGGAAGCGAAGTTCGGCAACAAGATCAAGATCACGCGCGTCGAGAACGTGCCCGAGTCCGCCGAC TCGGAACGTGTGTTCCGCGATCTCGCGAACAAGGGCAACAAGATCATCTTCGGTTCCAGCTTCGGGTTCCAGGATTTCGA GCTCAAGGTCGCGAAGGATTTCCCGGACACGGTCTTCCTGCACGCGACGGGTTACAAGAAAGCAGCGAACTTTGGCACGT ACGACGTGCGCATGTATCAGGGTGCCTATCTCGCGGGCGTCGCGGCCGGCTACGTGACGAAGACCAATACACTCGGCTTC GTCGCATCGGTGCCGATTCCTGAAGTGGTGCGCAACATCAACGCCTACACGCTCGGCGCGCGATCGGTGAATCCGAAGGT GCATACCAAGGTTATCTGGATCAACAGCTGGTTTGATCCGGGCAAGGAGAAGCAGGCTGCCGAAACGCTGATCGGTCAGG GCGCCGACGTGCTGCTGCAGAATACCGATTCGAGCGCGACGCTTGCGACGGCCTCCGAAAAGCACGTGCATGCATTCGGT TGGGATTCGGACATGAAGAAGTTCGGTCCTGACGCGCACCTCGGTTCAGTGGTCGCGCACTGGGGCGTGTACTACACGGC TGCCATCCAGCAGGTGCTGGACGGCAAGTGGAAGAACGACCCCGTGTGGTGGGGCATTCCGCAAAAGGCGGTCGATCTCG AAGACATGAACACGTCGGCGATCCCGGCCAATGCAATGAAGGATGTCGAGGCAAAGCGCACGCAACTGGCAAGCGGCAAG TGGGATGTGTTCACAGGTCCGATCAAGGATCAGACGGGTGCCGTGAAGGTGCCCGCAGGCAAGACGCTGGCCGATCCGGA ACTGCAGCGCCTGAATTGGTACGTCGAAGGGGTGGAAGGCTCGCTGCCGAAGTGA
Upstream 100 bases:
>100_bases CGGCATCGCTCGGTAAGCCGTTCTTTGCGGCGGGCTAAGCGGGTGTCGAATGCTGCATAACAGTTCACTAAGACATCTAA TCCAACGACAGGAGAAGAAC
Downstream 100 bases:
>100_bases CGTATTGAACCTGACTGCGCGTCACACGAAGGTTGGTCCGGCGCGGCAGTGGATCGCCCTGCCGTCACCTGAGGTTCGCG TGGGCACGTCAGAAGCTGCA
Product: basic membrane lipoprotein
Products: NA
Alternate protein names: Bmp Family Protein; Basic Membrane Protein; Lipoprotein; Bmp Family Membrane Protein; Basic Membrane Protein Family Protein; ABC Transporter Periplasmic/Surface Lipoprotein; ABC Transporter; Lipoprotein Periplasmic Protein; ABC Transporter Periplasmic Protein Surface Lipoprotein; Basic Membrane Lipoprotein Family; Twin-Arginine Translocation Pathway Signal; Outer Membrane Lipoprotein; Tat Pathway Signal Sequence/Basic Membrane Protein; Basic Membrane Lipoprotein Family Protein; Surface Lipoprotein; Basic Membrane Protein A-Like Protein; Signal Peptide Protein; ABC Transporter Periplasmic Protein; ABC-Type Transport Periplasmic Component
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MKKRTMLSALTLAAASFVASGALMPTAQAADVPGVAFVYLGNPGDAGWTYAHDQGSKEAEAKFGNKIKITRVENVPESAD SERVFRDLANKGNKIIFGSSFGFQDFELKVAKDFPDTVFLHATGYKKAANFGTYDVRMYQGAYLAGVAAGYVTKTNTLGF VASVPIPEVVRNINAYTLGARSVNPKVHTKVIWINSWFDPGKEKQAAETLIGQGADVLLQNTDSSATLATASEKHVHAFG WDSDMKKFGPDAHLGSVVAHWGVYYTAAIQQVLDGKWKNDPVWWGIPQKAVDLEDMNTSAIPANAMKDVEAKRTQLASGK WDVFTGPIKDQTGAVKVPAGKTLADPELQRLNWYVEGVEGSLPK
Sequences:
>Translated_364_residues MKKRTMLSALTLAAASFVASGALMPTAQAADVPGVAFVYLGNPGDAGWTYAHDQGSKEAEAKFGNKIKITRVENVPESAD SERVFRDLANKGNKIIFGSSFGFQDFELKVAKDFPDTVFLHATGYKKAANFGTYDVRMYQGAYLAGVAAGYVTKTNTLGF VASVPIPEVVRNINAYTLGARSVNPKVHTKVIWINSWFDPGKEKQAAETLIGQGADVLLQNTDSSATLATASEKHVHAFG WDSDMKKFGPDAHLGSVVAHWGVYYTAAIQQVLDGKWKNDPVWWGIPQKAVDLEDMNTSAIPANAMKDVEAKRTQLASGK WDVFTGPIKDQTGAVKVPAGKTLADPELQRLNWYVEGVEGSLPK >Mature_364_residues MKKRTMLSALTLAAASFVASGALMPTAQAADVPGVAFVYLGNPGDAGWTYAHDQGSKEAEAKFGNKIKITRVENVPESAD SERVFRDLANKGNKIIFGSSFGFQDFELKVAKDFPDTVFLHATGYKKAANFGTYDVRMYQGAYLAGVAAGYVTKTNTLGF VASVPIPEVVRNINAYTLGARSVNPKVHTKVIWINSWFDPGKEKQAAETLIGQGADVLLQNTDSSATLATASEKHVHAFG WDSDMKKFGPDAHLGSVVAHWGVYYTAAIQQVLDGKWKNDPVWWGIPQKAVDLEDMNTSAIPANAMKDVEAKRTQLASGK WDVFTGPIKDQTGAVKVPAGKTLADPELQRLNWYVEGVEGSLPK
Specific function: Unknown
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39377; Mature: 39377
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRTMLSALTLAAASFVASGALMPTAQAADVPGVAFVYLGNPGDAGWTYAHDQGSKEAE CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCHHH AKFGNKIKITRVENVPESADSERVFRDLANKGNKIIFGSSFGFQDFELKVAKDFPDTVFL HHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCEEEE HATGYKKAANFGTYDVRMYQGAYLAGVAAGYVTKTNTLGFVASVPIPEVVRNINAYTLGA EECCCCHHCCCCCEEEEEECCCEEHHHHHCCEEECCCCEEEEECCHHHHHHCCCEEEECC RSVNPKVHTKVIWINSWFDPGKEKQAAETLIGQGADVLLQNTDSSATLATASEKHVHAFG CCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCEEEEC WDSDMKKFGPDAHLGSVVAHWGVYYTAAIQQVLDGKWKNDPVWWGIPQKAVDLEDMNTSA CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHCCCCCCCCCC IPANAMKDVEAKRTQLASGKWDVFTGPIKDQTGAVKVPAGKTLADPELQRLNWYVEGVEG CCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEECCCCCCCCCCHHHHEEEEEECCCC SLPK CCCC >Mature Secondary Structure MKKRTMLSALTLAAASFVASGALMPTAQAADVPGVAFVYLGNPGDAGWTYAHDQGSKEAE CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCHHH AKFGNKIKITRVENVPESADSERVFRDLANKGNKIIFGSSFGFQDFELKVAKDFPDTVFL HHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCEEEE HATGYKKAANFGTYDVRMYQGAYLAGVAAGYVTKTNTLGFVASVPIPEVVRNINAYTLGA EECCCCHHCCCCCEEEEEECCCEEHHHHHCCEEECCCCEEEEECCHHHHHHCCCEEEECC RSVNPKVHTKVIWINSWFDPGKEKQAAETLIGQGADVLLQNTDSSATLATASEKHVHAFG CCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCEEEEC WDSDMKKFGPDAHLGSVVAHWGVYYTAAIQQVLDGKWKNDPVWWGIPQKAVDLEDMNTSA CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHCCCCCCCCCC IPANAMKDVEAKRTQLASGKWDVFTGPIKDQTGAVKVPAGKTLADPELQRLNWYVEGVEG CCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEECCCCCCCCCCHHHHEEEEEECCCC SLPK CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA