Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186476047

Identifier: 186476047

GI number: 186476047

Start: 1445431

End: 1446525

Strand: Reverse

Name: 186476047

Synonym: Bphy_1288

Alternate gene names: NA

Gene position: 1446525-1445431 (Counterclockwise)

Preceding gene: 186476048

Following gene: 186476045

Centisome position: 41.58

GC content: 60.91

Gene sequence:

>1095_bases
ATGAAAAAAAGGACCATGCTGAGCGCGCTGACGCTCGCGGCGGCGTCGTTCGTCGCGAGCGGCGCGCTGATGCCGACGGC
GCAGGCTGCCGACGTGCCTGGCGTCGCCTTCGTCTACCTCGGCAATCCGGGCGATGCAGGCTGGACCTACGCGCATGACC
AGGGCTCGAAAGAAGCGGAAGCGAAGTTCGGCAACAAGATCAAGATCACGCGCGTCGAGAACGTGCCCGAGTCCGCCGAC
TCGGAACGTGTGTTCCGCGATCTCGCGAACAAGGGCAACAAGATCATCTTCGGTTCCAGCTTCGGGTTCCAGGATTTCGA
GCTCAAGGTCGCGAAGGATTTCCCGGACACGGTCTTCCTGCACGCGACGGGTTACAAGAAAGCAGCGAACTTTGGCACGT
ACGACGTGCGCATGTATCAGGGTGCCTATCTCGCGGGCGTCGCGGCCGGCTACGTGACGAAGACCAATACACTCGGCTTC
GTCGCATCGGTGCCGATTCCTGAAGTGGTGCGCAACATCAACGCCTACACGCTCGGCGCGCGATCGGTGAATCCGAAGGT
GCATACCAAGGTTATCTGGATCAACAGCTGGTTTGATCCGGGCAAGGAGAAGCAGGCTGCCGAAACGCTGATCGGTCAGG
GCGCCGACGTGCTGCTGCAGAATACCGATTCGAGCGCGACGCTTGCGACGGCCTCCGAAAAGCACGTGCATGCATTCGGT
TGGGATTCGGACATGAAGAAGTTCGGTCCTGACGCGCACCTCGGTTCAGTGGTCGCGCACTGGGGCGTGTACTACACGGC
TGCCATCCAGCAGGTGCTGGACGGCAAGTGGAAGAACGACCCCGTGTGGTGGGGCATTCCGCAAAAGGCGGTCGATCTCG
AAGACATGAACACGTCGGCGATCCCGGCCAATGCAATGAAGGATGTCGAGGCAAAGCGCACGCAACTGGCAAGCGGCAAG
TGGGATGTGTTCACAGGTCCGATCAAGGATCAGACGGGTGCCGTGAAGGTGCCCGCAGGCAAGACGCTGGCCGATCCGGA
ACTGCAGCGCCTGAATTGGTACGTCGAAGGGGTGGAAGGCTCGCTGCCGAAGTGA

Upstream 100 bases:

>100_bases
CGGCATCGCTCGGTAAGCCGTTCTTTGCGGCGGGCTAAGCGGGTGTCGAATGCTGCATAACAGTTCACTAAGACATCTAA
TCCAACGACAGGAGAAGAAC

Downstream 100 bases:

>100_bases
CGTATTGAACCTGACTGCGCGTCACACGAAGGTTGGTCCGGCGCGGCAGTGGATCGCCCTGCCGTCACCTGAGGTTCGCG
TGGGCACGTCAGAAGCTGCA

Product: basic membrane lipoprotein

Products: NA

Alternate protein names: Bmp Family Protein; Basic Membrane Protein; Lipoprotein; Bmp Family Membrane Protein; Basic Membrane Protein Family Protein; ABC Transporter Periplasmic/Surface Lipoprotein; ABC Transporter; Lipoprotein Periplasmic Protein; ABC Transporter Periplasmic Protein Surface Lipoprotein; Basic Membrane Lipoprotein Family; Twin-Arginine Translocation Pathway Signal; Outer Membrane Lipoprotein; Tat Pathway Signal Sequence/Basic Membrane Protein; Basic Membrane Lipoprotein Family Protein; Surface Lipoprotein; Basic Membrane Protein A-Like Protein; Signal Peptide Protein; ABC Transporter Periplasmic Protein; ABC-Type Transport Periplasmic Component

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MKKRTMLSALTLAAASFVASGALMPTAQAADVPGVAFVYLGNPGDAGWTYAHDQGSKEAEAKFGNKIKITRVENVPESAD
SERVFRDLANKGNKIIFGSSFGFQDFELKVAKDFPDTVFLHATGYKKAANFGTYDVRMYQGAYLAGVAAGYVTKTNTLGF
VASVPIPEVVRNINAYTLGARSVNPKVHTKVIWINSWFDPGKEKQAAETLIGQGADVLLQNTDSSATLATASEKHVHAFG
WDSDMKKFGPDAHLGSVVAHWGVYYTAAIQQVLDGKWKNDPVWWGIPQKAVDLEDMNTSAIPANAMKDVEAKRTQLASGK
WDVFTGPIKDQTGAVKVPAGKTLADPELQRLNWYVEGVEGSLPK

Sequences:

>Translated_364_residues
MKKRTMLSALTLAAASFVASGALMPTAQAADVPGVAFVYLGNPGDAGWTYAHDQGSKEAEAKFGNKIKITRVENVPESAD
SERVFRDLANKGNKIIFGSSFGFQDFELKVAKDFPDTVFLHATGYKKAANFGTYDVRMYQGAYLAGVAAGYVTKTNTLGF
VASVPIPEVVRNINAYTLGARSVNPKVHTKVIWINSWFDPGKEKQAAETLIGQGADVLLQNTDSSATLATASEKHVHAFG
WDSDMKKFGPDAHLGSVVAHWGVYYTAAIQQVLDGKWKNDPVWWGIPQKAVDLEDMNTSAIPANAMKDVEAKRTQLASGK
WDVFTGPIKDQTGAVKVPAGKTLADPELQRLNWYVEGVEGSLPK
>Mature_364_residues
MKKRTMLSALTLAAASFVASGALMPTAQAADVPGVAFVYLGNPGDAGWTYAHDQGSKEAEAKFGNKIKITRVENVPESAD
SERVFRDLANKGNKIIFGSSFGFQDFELKVAKDFPDTVFLHATGYKKAANFGTYDVRMYQGAYLAGVAAGYVTKTNTLGF
VASVPIPEVVRNINAYTLGARSVNPKVHTKVIWINSWFDPGKEKQAAETLIGQGADVLLQNTDSSATLATASEKHVHAFG
WDSDMKKFGPDAHLGSVVAHWGVYYTAAIQQVLDGKWKNDPVWWGIPQKAVDLEDMNTSAIPANAMKDVEAKRTQLASGK
WDVFTGPIKDQTGAVKVPAGKTLADPELQRLNWYVEGVEGSLPK

Specific function: Unknown

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39377; Mature: 39377

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRTMLSALTLAAASFVASGALMPTAQAADVPGVAFVYLGNPGDAGWTYAHDQGSKEAE
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCHHH
AKFGNKIKITRVENVPESADSERVFRDLANKGNKIIFGSSFGFQDFELKVAKDFPDTVFL
HHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCEEEE
HATGYKKAANFGTYDVRMYQGAYLAGVAAGYVTKTNTLGFVASVPIPEVVRNINAYTLGA
EECCCCHHCCCCCEEEEEECCCEEHHHHHCCEEECCCCEEEEECCHHHHHHCCCEEEECC
RSVNPKVHTKVIWINSWFDPGKEKQAAETLIGQGADVLLQNTDSSATLATASEKHVHAFG
CCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCEEEEC
WDSDMKKFGPDAHLGSVVAHWGVYYTAAIQQVLDGKWKNDPVWWGIPQKAVDLEDMNTSA
CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHCCCCCCCCCC
IPANAMKDVEAKRTQLASGKWDVFTGPIKDQTGAVKVPAGKTLADPELQRLNWYVEGVEG
CCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEECCCCCCCCCCHHHHEEEEEECCCC
SLPK
CCCC
>Mature Secondary Structure
MKKRTMLSALTLAAASFVASGALMPTAQAADVPGVAFVYLGNPGDAGWTYAHDQGSKEAE
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCHHH
AKFGNKIKITRVENVPESADSERVFRDLANKGNKIIFGSSFGFQDFELKVAKDFPDTVFL
HHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCEEEE
HATGYKKAANFGTYDVRMYQGAYLAGVAAGYVTKTNTLGFVASVPIPEVVRNINAYTLGA
EECCCCHHCCCCCEEEEEECCCEEHHHHHCCEEECCCCEEEEECCHHHHHHCCCEEEECC
RSVNPKVHTKVIWINSWFDPGKEKQAAETLIGQGADVLLQNTDSSATLATASEKHVHAFG
CCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCEEEEC
WDSDMKKFGPDAHLGSVVAHWGVYYTAAIQQVLDGKWKNDPVWWGIPQKAVDLEDMNTSA
CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHCCCCCCCCCC
IPANAMKDVEAKRTQLASGKWDVFTGPIKDQTGAVKVPAGKTLADPELQRLNWYVEGVEG
CCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEECCCCCCCCCCHHHHEEEEEECCCC
SLPK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA