Click here to switch to the map view.

The map label for this gene is ybiT [H]

Identifier: 186476044

GI number: 186476044

Start: 1442253

End: 1443845

Strand: Reverse

Name: ybiT [H]

Synonym: Bphy_1285

Alternate gene names: 186476044

Gene position: 1443845-1442253 (Counterclockwise)

Preceding gene: 186476045

Following gene: 186476043

Centisome position: 41.5

GC content: 58.88

Gene sequence:

>1593_bases
GTGCTGTCTACTGCCAACATCACCATGCAATTCGGGCCGAAGCCCCTGTTCGAGAACATCTCGGTCAAATTCGGCGAAGG
CAACCGCTACGGCCTGATCGGCGCGAACGGTTGCGGCAAGTCGACGTTCATGAAAATCCTGGGCGGCGATCTCGAGCAAA
GTTCGGGCAATGTGATGCTCGAGCCGAACGTCCGCCTCGGCAAGTTGCGTCAGGACCAGTTCGCGTATGAAGATGTGCGT
GTGCTGGACGTCGTGATGATGGGCCACACGGAGATGTGGGCGGCCATGACCGAGCGCGACGCGATCTACGCGAATCCGGA
AGCGACCGACGACGACTACATGCATGCCGCCGAACTGGAAGCAAAATTCGCCGAATACGACGGCTACACGGCGGAAGCGC
GCGCGGGCGAACTGCTGCTCGGCATCGGTATCTCGATAGACCTGCACAATGGTCCGATGAGCAACGTCGCCCCCGGCTGG
AAACTGCGCGTGCTGCTCGCGCAGGCGCTGTTCTCGAAGCCGGACGTGCTGCTGCTCGATGAGCCGACCAACAACCTGGA
CATCAACTCAATCCGTTGGCTCGAGGACGTGCTCAATGAGTACGACTCGACGATGATCATTATTTCGCACGATCGTCACT
TCCTGAACCAGGTCTGCACGCACATGGCGGACATGGACTACGGCACGCTGAAGGTCTACCCGGGCAATTACGATGACTAC
ATGCTCGCCAGCACGCAGGCGCGCGAGCGTCAGCAGGCTGCGAACGCGAAGGCGAAGGAGCGTGTCGCGGATCTGCAGGA
CTTCGTGCGCCGCTTCTCGGCCAACAAATCGAAGGCACGTCAGGCGACCAGCCGTCTGAAGATGATCGACAAGATCAAGA
TCGAGGAATTCAAGCCGTCGTCGCGTCAGAATCCGTTCATTCGCTTCGAGTACGAGAAGAAGCTGCACAATATTGCAGTG
GTCGCGGAAAACATCACGAAGAAGTACGACCGCACGATCTTCAACAACTTCAACCTGAGCGTGCAGCCGGGTGAGCGCAT
CGCGATCATCGGCGAAAACGGCGCGGGCAAGACGACGCTGCTACGCGCGCTGCTCGGCAACCTGGCACTCGAGCACGGTA
CGATCAAGTGGGCTGAGAATGCGAATGTCGGCTACATGCCGCAGGACACGTATGAGGAGTTCCCGAACGATGTCACGCTG
ATGGACTGGATCGACCAGTACCGCAAGGAAGGCGACGACGAGCAGATGGTGCGTGGCACGCTCGGCCGCCTGCTGTTTAA
TGCAGACGACATCCGGAAGTCGGTGAAGGTACTGTCGGGCGGCGAGAAGGGTCGTATGATCTGGGGCAAGCTGATGCTGG
GCCGCCACAACGTGCTGCTGATGGATGAGCCGACGAACCACATGGACATGGAATCGATCGAATCGCTGCAAATCGCGCTC
GAGAAGTACGACGGCACGCTCATCTTCGTTTCGCACGACCGCGAATTCGTGAGTGGCCTTGCGAACCGCATCATCGAAGT
GAAGACGGATGGCACGTTGAACGACTTCGGCGGCAACTACGAAGACTTCCTGTCGAGCCAGGGTTTGCAGTAA

Upstream 100 bases:

>100_bases
GATAGGGGCTATCGTTGCCGCCTTGGGCGCGGCGCGCGTGACGCGATAACCTGCTAAAATAATTGGTTTTTCGCCGATCT
ATCATTCAAAGGGACGCGCC

Downstream 100 bases:

>100_bases
GCAGCACGGTTGCAAATCCTTCAAACCCGCTTCGTAAGAAGCGGGTTTTTCATTTGGGTTCTGCCGATTCGTTCGCTTTC
GCGTACTGACGTCTCTGGCA

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MLSTANITMQFGPKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILGGDLEQSSGNVMLEPNVRLGKLRQDQFAYEDVR
VLDVVMMGHTEMWAAMTERDAIYANPEATDDDYMHAAELEAKFAEYDGYTAEARAGELLLGIGISIDLHNGPMSNVAPGW
KLRVLLAQALFSKPDVLLLDEPTNNLDINSIRWLEDVLNEYDSTMIIISHDRHFLNQVCTHMADMDYGTLKVYPGNYDDY
MLASTQARERQQAANAKAKERVADLQDFVRRFSANKSKARQATSRLKMIDKIKIEEFKPSSRQNPFIRFEYEKKLHNIAV
VAENITKKYDRTIFNNFNLSVQPGERIAIIGENGAGKTTLLRALLGNLALEHGTIKWAENANVGYMPQDTYEEFPNDVTL
MDWIDQYRKEGDDEQMVRGTLGRLLFNADDIRKSVKVLSGGEKGRMIWGKLMLGRHNVLLMDEPTNHMDMESIESLQIAL
EKYDGTLIFVSHDREFVSGLANRIIEVKTDGTLNDFGGNYEDFLSSQGLQ

Sequences:

>Translated_530_residues
MLSTANITMQFGPKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILGGDLEQSSGNVMLEPNVRLGKLRQDQFAYEDVR
VLDVVMMGHTEMWAAMTERDAIYANPEATDDDYMHAAELEAKFAEYDGYTAEARAGELLLGIGISIDLHNGPMSNVAPGW
KLRVLLAQALFSKPDVLLLDEPTNNLDINSIRWLEDVLNEYDSTMIIISHDRHFLNQVCTHMADMDYGTLKVYPGNYDDY
MLASTQARERQQAANAKAKERVADLQDFVRRFSANKSKARQATSRLKMIDKIKIEEFKPSSRQNPFIRFEYEKKLHNIAV
VAENITKKYDRTIFNNFNLSVQPGERIAIIGENGAGKTTLLRALLGNLALEHGTIKWAENANVGYMPQDTYEEFPNDVTL
MDWIDQYRKEGDDEQMVRGTLGRLLFNADDIRKSVKVLSGGEKGRMIWGKLMLGRHNVLLMDEPTNHMDMESIESLQIAL
EKYDGTLIFVSHDREFVSGLANRIIEVKTDGTLNDFGGNYEDFLSSQGLQ
>Mature_530_residues
MLSTANITMQFGPKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILGGDLEQSSGNVMLEPNVRLGKLRQDQFAYEDVR
VLDVVMMGHTEMWAAMTERDAIYANPEATDDDYMHAAELEAKFAEYDGYTAEARAGELLLGIGISIDLHNGPMSNVAPGW
KLRVLLAQALFSKPDVLLLDEPTNNLDINSIRWLEDVLNEYDSTMIIISHDRHFLNQVCTHMADMDYGTLKVYPGNYDDY
MLASTQARERQQAANAKAKERVADLQDFVRRFSANKSKARQATSRLKMIDKIKIEEFKPSSRQNPFIRFEYEKKLHNIAV
VAENITKKYDRTIFNNFNLSVQPGERIAIIGENGAGKTTLLRALLGNLALEHGTIKWAENANVGYMPQDTYEEFPNDVTL
MDWIDQYRKEGDDEQMVRGTLGRLLFNADDIRKSVKVLSGGEKGRMIWGKLMLGRHNVLLMDEPTNHMDMESIESLQIAL
EKYDGTLIFVSHDREFVSGLANRIIEVKTDGTLNDFGGNYEDFLSSQGLQ

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=526, Percent_Identity=31.9391634980989, Blast_Score=266, Evalue=3e-71,
Organism=Homo sapiens, GI27881506, Length=532, Percent_Identity=29.8872180451128, Blast_Score=239, Evalue=4e-63,
Organism=Homo sapiens, GI10947137, Length=532, Percent_Identity=29.8872180451128, Blast_Score=239, Evalue=4e-63,
Organism=Homo sapiens, GI69354671, Length=538, Percent_Identity=28.2527881040892, Blast_Score=195, Evalue=9e-50,
Organism=Homo sapiens, GI10947135, Length=538, Percent_Identity=28.2527881040892, Blast_Score=195, Evalue=1e-49,
Organism=Escherichia coli, GI1787041, Length=531, Percent_Identity=67.0433145009416, Blast_Score=749, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=526, Percent_Identity=33.0798479087452, Blast_Score=296, Evalue=2e-81,
Organism=Escherichia coli, GI1787182, Length=550, Percent_Identity=31.4545454545455, Blast_Score=249, Evalue=4e-67,
Organism=Escherichia coli, GI2367384, Length=526, Percent_Identity=29.8479087452471, Blast_Score=239, Evalue=3e-64,
Organism=Escherichia coli, GI1788165, Length=193, Percent_Identity=30.0518134715026, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1790525, Length=565, Percent_Identity=21.0619469026549, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787029, Length=234, Percent_Identity=26.9230769230769, Blast_Score=80, Evalue=5e-16,
Organism=Escherichia coli, GI1789891, Length=224, Percent_Identity=25.8928571428571, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1788225, Length=217, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1789672, Length=214, Percent_Identity=27.5700934579439, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1788761, Length=207, Percent_Identity=29.4685990338164, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1787712, Length=206, Percent_Identity=26.6990291262136, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1790467, Length=204, Percent_Identity=24.0196078431373, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=531, Percent_Identity=30.6967984934087, Blast_Score=244, Evalue=1e-64,
Organism=Caenorhabditis elegans, GI17555318, Length=516, Percent_Identity=28.8759689922481, Blast_Score=237, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI17559834, Length=536, Percent_Identity=27.9850746268657, Blast_Score=215, Evalue=4e-56,
Organism=Saccharomyces cerevisiae, GI6320874, Length=517, Percent_Identity=29.9806576402321, Blast_Score=243, Evalue=6e-65,
Organism=Saccharomyces cerevisiae, GI6321121, Length=539, Percent_Identity=28.9424860853432, Blast_Score=229, Evalue=1e-60,
Organism=Saccharomyces cerevisiae, GI6323278, Length=416, Percent_Identity=24.5192307692308, Blast_Score=132, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6324314, Length=420, Percent_Identity=25.7142857142857, Blast_Score=125, Evalue=1e-29,
Organism=Saccharomyces cerevisiae, GI6325030, Length=386, Percent_Identity=27.2020725388601, Blast_Score=120, Evalue=4e-28,
Organism=Drosophila melanogaster, GI24666836, Length=507, Percent_Identity=31.7554240631164, Blast_Score=272, Evalue=5e-73,
Organism=Drosophila melanogaster, GI24642252, Length=534, Percent_Identity=28.0898876404494, Blast_Score=241, Evalue=7e-64,
Organism=Drosophila melanogaster, GI18859989, Length=534, Percent_Identity=28.0898876404494, Blast_Score=241, Evalue=7e-64,
Organism=Drosophila melanogaster, GI24641342, Length=549, Percent_Identity=29.143897996357, Blast_Score=230, Evalue=2e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59835; Mature: 59835

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSTANITMQFGPKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILGGDLEQSSGNVML
CCCCCEEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
EPNVRLGKLRQDQFAYEDVRVLDVVMMGHTEMWAAMTERDAIYANPEATDDDYMHAAELE
CCCCCCCCCCHHHHHHHHHHEEHHHHHCCHHHHHHHHCCCCEEECCCCCCCCHHHHHHHH
AKFAEYDGYTAEARAGELLLGIGISIDLHNGPMSNVAPGWKLRVLLAQALFSKPDVLLLD
HHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDINSIRWLEDVLNEYDSTMIIISHDRHFLNQVCTHMADMDYGTLKVYPGNYDDY
CCCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCE
MLASTQARERQQAANAKAKERVADLQDFVRRFSANKSKARQATSRLKMIDKIKIEEFKPS
EEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEHHCCCCC
SRQNPFIRFEYEKKLHNIAVVAENITKKYDRTIFNNFNLSVQPGERIAIIGENGAGKTTL
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCHHHH
LRALLGNLALEHGTIKWAENANVGYMPQDTYEEFPNDVTLMDWIDQYRKEGDDEQMVRGT
HHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHCCCCEEHHHHHHHHHHCCCHHHHHHHH
LGRLLFNADDIRKSVKVLSGGEKGRMIWGKLMLGRHNVLLMDEPTNHMDMESIESLQIAL
HHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHH
EKYDGTLIFVSHDREFVSGLANRIIEVKTDGTLNDFGGNYEDFLSSQGLQ
HHCCCEEEEEECCHHHHHHHHHCEEEEECCCCHHHCCCCHHHHHHCCCCC
>Mature Secondary Structure
MLSTANITMQFGPKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILGGDLEQSSGNVML
CCCCCEEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
EPNVRLGKLRQDQFAYEDVRVLDVVMMGHTEMWAAMTERDAIYANPEATDDDYMHAAELE
CCCCCCCCCCHHHHHHHHHHEEHHHHHCCHHHHHHHHCCCCEEECCCCCCCCHHHHHHHH
AKFAEYDGYTAEARAGELLLGIGISIDLHNGPMSNVAPGWKLRVLLAQALFSKPDVLLLD
HHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDINSIRWLEDVLNEYDSTMIIISHDRHFLNQVCTHMADMDYGTLKVYPGNYDDY
CCCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCE
MLASTQARERQQAANAKAKERVADLQDFVRRFSANKSKARQATSRLKMIDKIKIEEFKPS
EEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEHHCCCCC
SRQNPFIRFEYEKKLHNIAVVAENITKKYDRTIFNNFNLSVQPGERIAIIGENGAGKTTL
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCHHHH
LRALLGNLALEHGTIKWAENANVGYMPQDTYEEFPNDVTLMDWIDQYRKEGDDEQMVRGT
HHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHCCCCEEHHHHHHHHHHCCCHHHHHHHH
LGRLLFNADDIRKSVKVLSGGEKGRMIWGKLMLGRHNVLLMDEPTNHMDMESIESLQIAL
HHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHH
EKYDGTLIFVSHDREFVSGLANRIIEVKTDGTLNDFGGNYEDFLSSQGLQ
HHCCCEEEEEECCHHHHHHHHHCEEEEECCCCHHHCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]