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The map label for this gene is yhfC [H]

Identifier: 186476008

GI number: 186476008

Start: 1399244

End: 1400047

Strand: Reverse

Name: yhfC [H]

Synonym: Bphy_1249

Alternate gene names: 186476008

Gene position: 1400047-1399244 (Counterclockwise)

Preceding gene: 186476009

Following gene: 186476007

Centisome position: 40.24

GC content: 67.54

Gene sequence:

>804_bases
ATGTCCCGTCTACCTGTTTCTCCCGTTACGCTTGCCGCGCTCGCTGCCGCGACGATCTTCGTCGCGCTGCTTCCCATTTT
CCTGTACCGCCGTTGGCGCGCGCCGTTTGGGTTGAACCGGCGCGGCGCGATCCTGGGCATCGCCGTATTCGCGCTGTCCG
CGATGCTGGTCGAGCGCGCGCTCAACGACTATCTGCTGAGGCAGAACGCCGCCGCCAGCGAGTGGCTGTCGGACCCGCTC
GCGTTCGTCGTCTACGGCGCGCTGGCGGCGGGCATCTGTGAGGAAGTGGGACGCTTCATCGCGATGCGCTGGCTCGCGCG
ACGCAACACCGATCCCACGCGCACCGACGGCACCGCGCTTGCATATGGCCTGGGTCACGGCGGCGCGCAAGTGTGGCTCG
TCGGCGTGATGGTGCAGGCGCAATGGATCGCGTTCGGCGTGCTCGACAATCGCGGGCAGCTCGATGCGTACCTCGGTGAT
CTTCCGGCAGGTCCGCTGATGCGCATCCATTTGTTGCTTGCGAGTCTGTCGCCCGCGACGGCGGGTGTGTTCGTGATCGA
ACGCGTGGCGGCGCTAGTGTTCCAGATCGGGCTGTCGGTGCTGATGTGGCGCGGCGTCCAGGCCGGCTGGCGTGCCATAC
TGCCCGTCGCGATCGCCGCGCACGCGCTGATCGATGTGCCGGCGGCGATGTCGCAGGCCGGGCGACTATCGCTCATGAGC
GTCGATGCAATCTACGCCGTCGCGGCCATCGTCGTCGCTGCCGTGCTGATCCGTTTTCCCAGCCGCGCGTCGCGCGCGGT
GTGA

Upstream 100 bases:

>100_bases
AGCGGGCATCGACGATGCGTTGAGCGAACGTTGATCGACCTGCATTGCGGCGTGCGCTTACAATGCGCGGCGAGTTCAGC
CTTTCGCCCTGTTGACGCCC

Downstream 100 bases:

>100_bases
CGGGCGGATATCACACCCAACCCGAACAACAGGCCAGAGGCCAATCGACATGGAAGCCTATCAGTACGAATGCGCAGATG
CGGAGATCGAAGCGTTGGCG

Product: putative transmembrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSRLPVSPVTLAALAAATIFVALLPIFLYRRWRAPFGLNRRGAILGIAVFALSAMLVERALNDYLLRQNAAASEWLSDPL
AFVVYGALAAGICEEVGRFIAMRWLARRNTDPTRTDGTALAYGLGHGGAQVWLVGVMVQAQWIAFGVLDNRGQLDAYLGD
LPAGPLMRIHLLLASLSPATAGVFVIERVAALVFQIGLSVLMWRGVQAGWRAILPVAIAAHALIDVPAAMSQAGRLSLMS
VDAIYAVAAIVVAAVLIRFPSRASRAV

Sequences:

>Translated_267_residues
MSRLPVSPVTLAALAAATIFVALLPIFLYRRWRAPFGLNRRGAILGIAVFALSAMLVERALNDYLLRQNAAASEWLSDPL
AFVVYGALAAGICEEVGRFIAMRWLARRNTDPTRTDGTALAYGLGHGGAQVWLVGVMVQAQWIAFGVLDNRGQLDAYLGD
LPAGPLMRIHLLLASLSPATAGVFVIERVAALVFQIGLSVLMWRGVQAGWRAILPVAIAAHALIDVPAAMSQAGRLSLMS
VDAIYAVAAIVVAAVLIRFPSRASRAV
>Mature_266_residues
SRLPVSPVTLAALAAATIFVALLPIFLYRRWRAPFGLNRRGAILGIAVFALSAMLVERALNDYLLRQNAAASEWLSDPLA
FVVYGALAAGICEEVGRFIAMRWLARRNTDPTRTDGTALAYGLGHGGAQVWLVGVMVQAQWIAFGVLDNRGQLDAYLGDL
PAGPLMRIHLLLASLSPATAGVFVIERVAALVFQIGLSVLMWRGVQAGWRAILPVAIAAHALIDVPAAMSQAGRLSLMSV
DAIYAVAAIVVAAVLIRFPSRASRAV

Specific function: Unknown

COG id: COG4377

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011397 [H]

Pfam domain/function: PF10086 DUF2324 [H]

EC number: NA

Molecular weight: Translated: 28481; Mature: 28350

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLPVSPVTLAALAAATIFVALLPIFLYRRWRAPFGLNRRGAILGIAVFALSAMLVERA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LNDYLLRQNAAASEWLSDPLAFVVYGALAAGICEEVGRFIAMRWLARRNTDPTRTDGTAL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
AYGLGHGGAQVWLVGVMVQAQWIAFGVLDNRGQLDAYLGDLPAGPLMRIHLLLASLSPAT
EEECCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHCCCHH
AGVFVIERVAALVFQIGLSVLMWRGVQAGWRAILPVAIAAHALIDVPAAMSQAGRLSLMS
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VDAIYAVAAIVVAAVLIRFPSRASRAV
HHHHHHHHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure 
SRLPVSPVTLAALAAATIFVALLPIFLYRRWRAPFGLNRRGAILGIAVFALSAMLVERA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LNDYLLRQNAAASEWLSDPLAFVVYGALAAGICEEVGRFIAMRWLARRNTDPTRTDGTAL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
AYGLGHGGAQVWLVGVMVQAQWIAFGVLDNRGQLDAYLGDLPAGPLMRIHLLLASLSPAT
EEECCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHCCCHH
AGVFVIERVAALVFQIGLSVLMWRGVQAGWRAILPVAIAAHALIDVPAAMSQAGRLSLMS
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VDAIYAVAAIVVAAVLIRFPSRASRAV
HHHHHHHHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]