Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is 186475978
Identifier: 186475978
GI number: 186475978
Start: 1368254
End: 1368466
Strand: Reverse
Name: 186475978
Synonym: Bphy_1219
Alternate gene names: NA
Gene position: 1368466-1368254 (Counterclockwise)
Preceding gene: 186475979
Following gene: 186475977
Centisome position: 39.33
GC content: 59.62
Gene sequence:
>213_bases ATGTCGCCCCGTTTTCAGATCTTTGAAAGAATTGCCTTTTCGCTGGTCGTGATGTCCGCTGTTCTGTGTTCCGGCTACAT CGCGTGGGAAACGTCGCCCGATTTCCAGGACGCCGTGCACGCCAGTGCTGCGGCCGTGCGCTGGAGCGGCGACTATTCAT TCATCTGCGCGTCGACGGCGACCAACGCCTGCGATCAGCTACCCGTCGACTGA
Upstream 100 bases:
>100_bases CGACGGGCGATTGCGAACGCGCATGTTGCAAAGCCGCAATGCAGGCTAGGTGAAAACCCTAGCATTGCGATAAAATGCGG GCTCACACGAAGAGATTGCC
Downstream 100 bases:
>100_bases CTCCTCGAAGCGACACGGAAGAACACGCTGGCGCGCATCGAGGCGCAAGCCAGCACGCAACGTCGGGTAATTTTCTCTCC TTCCGTCGGCGTTTTTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MSPRFQIFERIAFSLVVMSAVLCSGYIAWETSPDFQDAVHASAAAVRWSGDYSFICASTATNACDQLPVD
Sequences:
>Translated_70_residues MSPRFQIFERIAFSLVVMSAVLCSGYIAWETSPDFQDAVHASAAAVRWSGDYSFICASTATNACDQLPVD >Mature_69_residues SPRFQIFERIAFSLVVMSAVLCSGYIAWETSPDFQDAVHASAAAVRWSGDYSFICASTATNACDQLPVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7624; Mature: 7492
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPRFQIFERIAFSLVVMSAVLCSGYIAWETSPDFQDAVHASAAAVRWSGDYSFICASTA CCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHEEEECCCCEEEECCCC TNACDQLPVD CCCCCCCCCC >Mature Secondary Structure SPRFQIFERIAFSLVVMSAVLCSGYIAWETSPDFQDAVHASAAAVRWSGDYSFICASTA CCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHEEEECCCCEEEECCCC TNACDQLPVD CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA