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The map label for this gene is yebA [H]

Identifier: 183222808

GI number: 183222808

Start: 3588392

End: 3589381

Strand: Direct

Name: yebA [H]

Synonym: LEPBI_I3469

Alternate gene names: 183222808

Gene position: 3588392-3589381 (Clockwise)

Preceding gene: 183222802

Following gene: 183222809

Centisome position: 99.69

GC content: 39.7

Gene sequence:

>990_bases
GTGGAAGTAAAACAAAGATTACATTTAATTTTCTACCGACTTCGGTATAAAGTCCAGGAATGGAAGCTTAAGTTATCCCA
ACGTTATGAGGATTTGGACAAAAAGGGTCGCGAAAAGCTGACCATCATGGTCATTCCTCACACGGATCGAAAAACAATTA
ACTTTGTTATCTCATACAAAGCCATATCCATCTTCATTGGGATCATGGTTGTTCTCCTTGTGATTAGCGCTGTGAATGTT
TTATCTCATAGTGGATCCATCCACCAACTCACAGAACTCAATCTCACAAACAAAGACTTTATCCGACAATCATCAAAAAT
GAAAGAAGAGGTAAATTCTCTTCACGAAACCATCCAATACTATTACGAACGAATTTCCAATCTTTACATCAAATTAGGTG
GTGATCCATCGCGCGTATCGAAAGGGATGGGTGGACAAGCAGGCCAGTTCCTTGCCCTACAAGGTACACCACAGACTGAC
ATTACTGATGAATCCTTCCGCATCAAAGAAGACATTCACAATTTAAAACTGTCTTCAGAACTTTCAGAAGAGATCATCAA
ACTCATCAAAAAAAGAAAGAGCATCATTAAAAACACACCTTCGATTTGGCCAACCAAAGGGTATGTGTTATTCCCTTTTG
GAAAGTACATCTCACCCATCACTGGAAAAGAAGAAATCAATCGTGGATTGGACATTGGTTCCTTTCCAGGCGCGGAAGTC
ATTGCAACAGCACCGGGACTTGTGTTTGATACAGGTTACTCACCAGCAACTGGTTACTATGTAAAAATATCTCACAGATT
TGGATGGAAAACGATCTACTCTAATTTGGATCGAATCCGTGTGAAGAAAAATGAAAAACTTTCCAAGGGCGACATTCTTG
GTTACGTTGGAAAATCACCTGAAAATCCGATTTACCACCTCCATTATGAAGTACATGTTGGTACTCAGGCGTTGAATCCG
TTTTCGTTTCTCAACCAAATCCAAGAATAA

Upstream 100 bases:

>100_bases
GCAAGATTTGTAATTTCCACTGGATGAAAATGAAAATTCAATCGAAAGATATAGTGGGTAGATTAACTTTTGTTTAAATC
ATCATAGGTCTATAACGAAC

Downstream 100 bases:

>100_bases
TGTCGAATCCATCTACAGAAGAAGAATTTTTAGTTAATAGCATCATCGGAGAAGGGGCTGAGTTCACAGGCGAATTTAAG
TTCCCTGGCCTCATTCGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MEVKQRLHLIFYRLRYKVQEWKLKLSQRYEDLDKKGREKLTIMVIPHTDRKTINFVISYKAISIFIGIMVVLLVISAVNV
LSHSGSIHQLTELNLTNKDFIRQSSKMKEEVNSLHETIQYYYERISNLYIKLGGDPSRVSKGMGGQAGQFLALQGTPQTD
ITDESFRIKEDIHNLKLSSELSEEIIKLIKKRKSIIKNTPSIWPTKGYVLFPFGKYISPITGKEEINRGLDIGSFPGAEV
IATAPGLVFDTGYSPATGYYVKISHRFGWKTIYSNLDRIRVKKNEKLSKGDILGYVGKSPENPIYHLHYEVHVGTQALNP
FSFLNQIQE

Sequences:

>Translated_329_residues
MEVKQRLHLIFYRLRYKVQEWKLKLSQRYEDLDKKGREKLTIMVIPHTDRKTINFVISYKAISIFIGIMVVLLVISAVNV
LSHSGSIHQLTELNLTNKDFIRQSSKMKEEVNSLHETIQYYYERISNLYIKLGGDPSRVSKGMGGQAGQFLALQGTPQTD
ITDESFRIKEDIHNLKLSSELSEEIIKLIKKRKSIIKNTPSIWPTKGYVLFPFGKYISPITGKEEINRGLDIGSFPGAEV
IATAPGLVFDTGYSPATGYYVKISHRFGWKTIYSNLDRIRVKKNEKLSKGDILGYVGKSPENPIYHLHYEVHVGTQALNP
FSFLNQIQE
>Mature_329_residues
MEVKQRLHLIFYRLRYKVQEWKLKLSQRYEDLDKKGREKLTIMVIPHTDRKTINFVISYKAISIFIGIMVVLLVISAVNV
LSHSGSIHQLTELNLTNKDFIRQSSKMKEEVNSLHETIQYYYERISNLYIKLGGDPSRVSKGMGGQAGQFLALQGTPQTD
ITDESFRIKEDIHNLKLSSELSEEIIKLIKKRKSIIKNTPSIWPTKGYVLFPFGKYISPITGKEEINRGLDIGSFPGAEV
IATAPGLVFDTGYSPATGYYVKISHRFGWKTIYSNLDRIRVKKNEKLSKGDILGYVGKSPENPIYHLHYEVHVGTQALNP
FSFLNQIQE

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=129, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 37657; Mature: 37657

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVKQRLHLIFYRLRYKVQEWKLKLSQRYEDLDKKGREKLTIMVIPHTDRKTINFVISYK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEHH
AISIFIGIMVVLLVISAVNVLSHSGSIHQLTELNLTNKDFIRQSSKMKEEVNSLHETIQY
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
YYERISNLYIKLGGDPSRVSKGMGGQAGQFLALQGTPQTDITDESFRIKEDIHNLKLSSE
HHHHHCCEEEEECCCHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
LSEEIIKLIKKRKSIIKNTPSIWPTKGYVLFPFGKYISPITGKEEINRGLDIGSFPGAEV
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHCCCCCHHHHHCCCCCCCCCCCCE
IATAPGLVFDTGYSPATGYYVKISHRFGWKTIYSNLDRIRVKKNEKLSKGDILGYVGKSP
EEECCCEEEECCCCCCCCEEEEEECCCCHHHHHCCHHHEEECCCCCCCCCCEEEECCCCC
ENPIYHLHYEVHVGTQALNPFSFLNQIQE
CCCEEEEEEEEEECCHHCCHHHHHHHHCC
>Mature Secondary Structure
MEVKQRLHLIFYRLRYKVQEWKLKLSQRYEDLDKKGREKLTIMVIPHTDRKTINFVISYK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEHH
AISIFIGIMVVLLVISAVNVLSHSGSIHQLTELNLTNKDFIRQSSKMKEEVNSLHETIQY
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
YYERISNLYIKLGGDPSRVSKGMGGQAGQFLALQGTPQTDITDESFRIKEDIHNLKLSSE
HHHHHCCEEEEECCCHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
LSEEIIKLIKKRKSIIKNTPSIWPTKGYVLFPFGKYISPITGKEEINRGLDIGSFPGAEV
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHCCCCCHHHHHCCCCCCCCCCCCE
IATAPGLVFDTGYSPATGYYVKISHRFGWKTIYSNLDRIRVKKNEKLSKGDILGYVGKSP
EEECCCEEEECCCCCCCCEEEEEECCCCHHHHHCCHHHEEECCCCCCCCCCEEEECCCCC
ENPIYHLHYEVHVGTQALNPFSFLNQIQE
CCCEEEEEEEEEECCHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]