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The map label for this gene is hepA [H]

Identifier: 183222781

GI number: 183222781

Start: 3559378

End: 3562224

Strand: Direct

Name: hepA [H]

Synonym: LEPBI_I3440

Alternate gene names: 183222781

Gene position: 3559378-3562224 (Clockwise)

Preceding gene: 183222780

Following gene: 183222782

Centisome position: 98.88

GC content: 36.14

Gene sequence:

>2847_bases
TTGATGGATATCCCTACTCAGTTAAGTTTAGATTTTGAAACAACGGTTGAACCAAAACAATCGAATGAGTATGGTTTTCT
AATCGACGAACCAGAGTTAGGTCTTGCAAAAGTCACGAAAGAAACGCCTACATCTGTTGAATTATTCTTTGAATCCAAAG
AAATTTTTCGCACTGTAAACAAATCAAATCGTAATCTACATTTTTTAAACCAGTATCCAGAGTCACTTCGGGTATCGGAA
GAATTTCCAAAAGCCATGGAGCTTGCCCTTACCGCAAGCCAACTCAAACTCACTTACAATTTTAATAAACTATCTTCCCT
TTCCAACTCTAGAACTCGTTTATTACCTCACCAAATTGAATCCACTTTTATAGTCGCAAATAGTTTGAAACCACGTTTCA
TTTTGGCCGACGAAGTGGGACTTGGTAAAACGATTGAAGCTGGTCTTGCTGTAAAAGAATTGATGTTTCGTCGTGGTCTC
AAACGGGTGTTAGTGGTCGCTCCTTCACCACTACTTGTGCAATGGCAACAAGAAATGAAAAACAAATTCAATGAGGAATT
TGCCATTGTTCGTAGGCGTAACTTTGTAACCAATGGACCAGATCATTGGAGAAATTTTAACAAAATCATTACTTCCATTG
ATTTTATCAAGAATCCAAGGTATGCCGAAGAAATTCTCGGAACCAAATGGGACATTGTTGTTTTCGATGAAGCCCATAGA
CTCAGACGTGATTATTCCAAAATCACACGTGGTTATCTATTTGCGGAAAAAATTGCTCGCAAGACAGAATGTTTACTCCT
CCTTACGGCTACACCTTTTCGTGGAAAATTAGAAGAACTATTTTATCTCATGCACTTAGTGGATCCGAATATTTTGGGCC
CTTATCATACGTTTATCAATGATTATGTGGTGGGACAAAAAGGAGACTTAAAGGAAAAAATCTCAAAAGTGCTCCTCCGA
CGCCGTAAAGTGGAAGTGGGTGGTTTTACCAAACGTTTTGCAAAAACTGTGCGAATTGATTTATCTCCCATTGAACGCGC
ATTTTATGATGAAACTACCGAATATGTAAAACGAGAATACAATATGGCGATGGGAACCAAAAACCGTGCCATCGGTTTTG
TCATGGTAGTATTCCAAAAGTTATTAGATTCATCTGTCATTGCCTTGTTATCAGCCCTTCAGAAACGTAAATTTATGTTG
GAATCCAAGTTCCATTATATGAAAGAACATGAAACCAATTTGGATGATTGGGATTTGGATGAAACAGAAGGTGTAGAAGA
TTTTATCACAGAACTGGAAGATGAAGAGATGTCTAGTTTCCAAAGGATCAAACGCGAGTTATTCACTCTCAACCGTTTGA
TCCATTTAGGCAAACAAATCAAAGAAGATAAAAAAACACAAAAATTAAGAGAAACCCTCTATCGATTGAAAAAAGAAGGT
CATAAAAAATTCATTATCTTCACACAATTTCGGACCACTCAGGATCATTTACAATCCGTACTAGAACCTGATTTCAAAGT
TTCTCCTTTCCATGGATCTCTTAGTATGGATGAAAAAGAAGTAGCGATCCAAAAATTCAAAGAGGATTATGAAATTCTAA
TTTGTACGGAAGCTGGTGGGGAAGGACGTAACTTACAATTTGCCAATATACTCTTCAACTATGATCTTCCATGGAGTCCT
TTAAAAATTGAACAAAGGATTGGAAGGATCCATCGTTTTGGTCAAAAAGATAATGTGTATATCTTTAACTTTGCCTCTAA
AGACACAGTTGCGGAACGGATACTTGAAGTACTCACAAACAAAATCCGATTGTTTGAAGAATCCATTGGTGCTTCAGATG
ATTTACTTGGTACCATCGAAGAGGAATTGGATTTTAATTCTAGTTTGATGAAATTCATCACAGGGACAAAAACGAAAGAA
GAATTAGAAACTGAGTTTGATCTTCGCATCCAAGTAGCCCAAAAAGGATTTGAAAAACTAAACGCCCTTGTAACTCCGAA
AGTTTTAGATTTTAATTTAAAAGATTATTACGATCATACCTTAGAAGAAAGAGAATGGAATAACCAACATTTAGAAGAAG
TTGTTTCAGAAGGATCCAAGTTTTTCCAAAACAAACTCCCTGGATCGTTGGCTGTCACAGGAAAAGGTAGTTACGAATAT
AAGAATTTGGAAGGAAAAGTCAAAAAAGCAACCTTTGACTCAGACTTAGCGCTGACCAATGATTCGCTAGAATTTATGGC
CTTTGGACATCCATTTGTCGAAAAAGTAACCGAACTCTTAACACATAGTAATGTTGGCCGAAAGAAAAAATATTTATACT
CTCAAAATTTAAGTCAAAAGATATTATTTGTTTTCCAAGTGGAGTTTGATTTTTCACTCAAACGAAAAGATTTGTTTTTT
ATCGAATTTGATTTAAAGAAAAAGAAATCGCTCGTAGTGACGGAAAAACCAAAAGAATGGACAGAAGGAAAAACATACGT
TCCCGAAACTGAAATCCCACTTTCAAAGTTGGAAGAAGCATTCATCCATTGTTTTCCCATTGTAGAATCAGAGGCCGAAA
TCAAAAAAGAAATCTTACGGAAAGAAACTCTTTCTATTTTCCAAAAAGAGGAATACAAAGTAGAACTCTCTCACCAAAAA
ACGATTCGCCAATTGGAAGAAAAATTAATGAGGCAAGAAGCTGCCTACAAATGGGACAATCGACCTGAAAAAAAAGCAGT
GCTTCATAAAACAATGAAGGAAATCCAAAGAGCAAAAGACGAATACACAGTGGAAATGCGAAAAATCAAAAATGGAGCAA
AAATTTTCCACCGAATCCAACTCTTCCAAACTTATATCTGCATTTAA

Upstream 100 bases:

>100_bases
ATGCCAAAGAACTAGTTGAATGGATAAAAATAGACAACCCACCTAAGGGTCGTTTGTCGCTTCAAATTCATAAAGTGCTT
TGGGGAAATCAGAAAGGAGT

Downstream 100 bases:

>100_bases
ATTCATTTACATAGAATTGAAAATTTAAAAAATTGGGGAATGTCCCTTCCCAAAATTGCCTTTTGGAAACAAATTCTCAT
CTCTTTAGTGTTAGGTTTAG

Product: ATP-dependent RNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 948; Mature: 948

Protein sequence:

>948_residues
MMDIPTQLSLDFETTVEPKQSNEYGFLIDEPELGLAKVTKETPTSVELFFESKEIFRTVNKSNRNLHFLNQYPESLRVSE
EFPKAMELALTASQLKLTYNFNKLSSLSNSRTRLLPHQIESTFIVANSLKPRFILADEVGLGKTIEAGLAVKELMFRRGL
KRVLVVAPSPLLVQWQQEMKNKFNEEFAIVRRRNFVTNGPDHWRNFNKIITSIDFIKNPRYAEEILGTKWDIVVFDEAHR
LRRDYSKITRGYLFAEKIARKTECLLLLTATPFRGKLEELFYLMHLVDPNILGPYHTFINDYVVGQKGDLKEKISKVLLR
RRKVEVGGFTKRFAKTVRIDLSPIERAFYDETTEYVKREYNMAMGTKNRAIGFVMVVFQKLLDSSVIALLSALQKRKFML
ESKFHYMKEHETNLDDWDLDETEGVEDFITELEDEEMSSFQRIKRELFTLNRLIHLGKQIKEDKKTQKLRETLYRLKKEG
HKKFIIFTQFRTTQDHLQSVLEPDFKVSPFHGSLSMDEKEVAIQKFKEDYEILICTEAGGEGRNLQFANILFNYDLPWSP
LKIEQRIGRIHRFGQKDNVYIFNFASKDTVAERILEVLTNKIRLFEESIGASDDLLGTIEEELDFNSSLMKFITGTKTKE
ELETEFDLRIQVAQKGFEKLNALVTPKVLDFNLKDYYDHTLEEREWNNQHLEEVVSEGSKFFQNKLPGSLAVTGKGSYEY
KNLEGKVKKATFDSDLALTNDSLEFMAFGHPFVEKVTELLTHSNVGRKKKYLYSQNLSQKILFVFQVEFDFSLKRKDLFF
IEFDLKKKKSLVVTEKPKEWTEGKTYVPETEIPLSKLEEAFIHCFPIVESEAEIKKEILRKETLSIFQKEEYKVELSHQK
TIRQLEEKLMRQEAAYKWDNRPEKKAVLHKTMKEIQRAKDEYTVEMRKIKNGAKIFHRIQLFQTYICI

Sequences:

>Translated_948_residues
MMDIPTQLSLDFETTVEPKQSNEYGFLIDEPELGLAKVTKETPTSVELFFESKEIFRTVNKSNRNLHFLNQYPESLRVSE
EFPKAMELALTASQLKLTYNFNKLSSLSNSRTRLLPHQIESTFIVANSLKPRFILADEVGLGKTIEAGLAVKELMFRRGL
KRVLVVAPSPLLVQWQQEMKNKFNEEFAIVRRRNFVTNGPDHWRNFNKIITSIDFIKNPRYAEEILGTKWDIVVFDEAHR
LRRDYSKITRGYLFAEKIARKTECLLLLTATPFRGKLEELFYLMHLVDPNILGPYHTFINDYVVGQKGDLKEKISKVLLR
RRKVEVGGFTKRFAKTVRIDLSPIERAFYDETTEYVKREYNMAMGTKNRAIGFVMVVFQKLLDSSVIALLSALQKRKFML
ESKFHYMKEHETNLDDWDLDETEGVEDFITELEDEEMSSFQRIKRELFTLNRLIHLGKQIKEDKKTQKLRETLYRLKKEG
HKKFIIFTQFRTTQDHLQSVLEPDFKVSPFHGSLSMDEKEVAIQKFKEDYEILICTEAGGEGRNLQFANILFNYDLPWSP
LKIEQRIGRIHRFGQKDNVYIFNFASKDTVAERILEVLTNKIRLFEESIGASDDLLGTIEEELDFNSSLMKFITGTKTKE
ELETEFDLRIQVAQKGFEKLNALVTPKVLDFNLKDYYDHTLEEREWNNQHLEEVVSEGSKFFQNKLPGSLAVTGKGSYEY
KNLEGKVKKATFDSDLALTNDSLEFMAFGHPFVEKVTELLTHSNVGRKKKYLYSQNLSQKILFVFQVEFDFSLKRKDLFF
IEFDLKKKKSLVVTEKPKEWTEGKTYVPETEIPLSKLEEAFIHCFPIVESEAEIKKEILRKETLSIFQKEEYKVELSHQK
TIRQLEEKLMRQEAAYKWDNRPEKKAVLHKTMKEIQRAKDEYTVEMRKIKNGAKIFHRIQLFQTYICI
>Mature_948_residues
MMDIPTQLSLDFETTVEPKQSNEYGFLIDEPELGLAKVTKETPTSVELFFESKEIFRTVNKSNRNLHFLNQYPESLRVSE
EFPKAMELALTASQLKLTYNFNKLSSLSNSRTRLLPHQIESTFIVANSLKPRFILADEVGLGKTIEAGLAVKELMFRRGL
KRVLVVAPSPLLVQWQQEMKNKFNEEFAIVRRRNFVTNGPDHWRNFNKIITSIDFIKNPRYAEEILGTKWDIVVFDEAHR
LRRDYSKITRGYLFAEKIARKTECLLLLTATPFRGKLEELFYLMHLVDPNILGPYHTFINDYVVGQKGDLKEKISKVLLR
RRKVEVGGFTKRFAKTVRIDLSPIERAFYDETTEYVKREYNMAMGTKNRAIGFVMVVFQKLLDSSVIALLSALQKRKFML
ESKFHYMKEHETNLDDWDLDETEGVEDFITELEDEEMSSFQRIKRELFTLNRLIHLGKQIKEDKKTQKLRETLYRLKKEG
HKKFIIFTQFRTTQDHLQSVLEPDFKVSPFHGSLSMDEKEVAIQKFKEDYEILICTEAGGEGRNLQFANILFNYDLPWSP
LKIEQRIGRIHRFGQKDNVYIFNFASKDTVAERILEVLTNKIRLFEESIGASDDLLGTIEEELDFNSSLMKFITGTKTKE
ELETEFDLRIQVAQKGFEKLNALVTPKVLDFNLKDYYDHTLEEREWNNQHLEEVVSEGSKFFQNKLPGSLAVTGKGSYEY
KNLEGKVKKATFDSDLALTNDSLEFMAFGHPFVEKVTELLTHSNVGRKKKYLYSQNLSQKILFVFQVEFDFSLKRKDLFF
IEFDLKKKKSLVVTEKPKEWTEGKTYVPETEIPLSKLEEAFIHCFPIVESEAEIKKEILRKETLSIFQKEEYKVELSHQK
TIRQLEEKLMRQEAAYKWDNRPEKKAVLHKTMKEIQRAKDEYTVEMRKIKNGAKIFHRIQLFQTYICI

Specific function: Transcription Regulator That Activates Transcription By Stimulating RNA Polymerase (Rnap) Recycling In Case Of Stress Conditions Such As Supercoiled DNA Or High Salt Concentrations. Probably Acts By Releasing The Rnap, When It Is Trapped Or Immobilized On

COG id: COG0553

COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI24308089, Length=510, Percent_Identity=26.2745098039216, Blast_Score=120, Evalue=8e-27,
Organism=Homo sapiens, GI52630322, Length=553, Percent_Identity=26.5822784810127, Blast_Score=119, Evalue=1e-26,
Organism=Homo sapiens, GI52630326, Length=553, Percent_Identity=26.5822784810127, Blast_Score=119, Evalue=2e-26,
Organism=Homo sapiens, GI158420731, Length=553, Percent_Identity=26.5822784810127, Blast_Score=119, Evalue=2e-26,
Organism=Homo sapiens, GI118421089, Length=501, Percent_Identity=27.1457085828343, Blast_Score=110, Evalue=9e-24,
Organism=Homo sapiens, GI95147342, Length=513, Percent_Identity=22.8070175438596, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI6912622, Length=546, Percent_Identity=23.8095238095238, Blast_Score=100, Evalue=1e-20,
Organism=Homo sapiens, GI29244924, Length=495, Percent_Identity=23.2323232323232, Blast_Score=98, Evalue=4e-20,
Organism=Homo sapiens, GI282165704, Length=500, Percent_Identity=23, Blast_Score=92, Evalue=3e-18,
Organism=Homo sapiens, GI190358536, Length=508, Percent_Identity=24.0157480314961, Blast_Score=91, Evalue=5e-18,
Organism=Homo sapiens, GI190358532, Length=508, Percent_Identity=24.0157480314961, Blast_Score=91, Evalue=5e-18,
Organism=Homo sapiens, GI190358534, Length=508, Percent_Identity=24.0157480314961, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI51599156, Length=253, Percent_Identity=29.6442687747036, Blast_Score=81, Evalue=6e-15,
Organism=Homo sapiens, GI68299795, Length=275, Percent_Identity=26.9090909090909, Blast_Score=81, Evalue=6e-15,
Organism=Homo sapiens, GI21914927, Length=140, Percent_Identity=34.2857142857143, Blast_Score=76, Evalue=2e-13,
Organism=Homo sapiens, GI192807320, Length=243, Percent_Identity=29.2181069958848, Blast_Score=75, Evalue=4e-13,
Organism=Homo sapiens, GI192807316, Length=243, Percent_Identity=29.2181069958848, Blast_Score=75, Evalue=4e-13,
Organism=Homo sapiens, GI192807312, Length=243, Percent_Identity=29.2181069958848, Blast_Score=75, Evalue=4e-13,
Organism=Homo sapiens, GI21071056, Length=243, Percent_Identity=29.2181069958848, Blast_Score=75, Evalue=4e-13,
Organism=Homo sapiens, GI192807318, Length=243, Percent_Identity=29.2181069958848, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI192807314, Length=244, Percent_Identity=29.0983606557377, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI192807323, Length=243, Percent_Identity=29.2181069958848, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI146219843, Length=264, Percent_Identity=26.1363636363636, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI114326455, Length=244, Percent_Identity=27.4590163934426, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI21071058, Length=141, Percent_Identity=31.9148936170213, Blast_Score=71, Evalue=4e-12,
Organism=Homo sapiens, GI48255900, Length=244, Percent_Identity=27.4590163934426, Blast_Score=70, Evalue=1e-11,
Organism=Homo sapiens, GI48255898, Length=244, Percent_Identity=27.4590163934426, Blast_Score=70, Evalue=1e-11,
Organism=Homo sapiens, GI164419749, Length=141, Percent_Identity=32.6241134751773, Blast_Score=69, Evalue=2e-11,
Organism=Escherichia coli, GI1786245, Length=213, Percent_Identity=34.2723004694836, Blast_Score=125, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17569817, Length=552, Percent_Identity=25.9057971014493, Blast_Score=118, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI32563629, Length=496, Percent_Identity=27.2177419354839, Blast_Score=117, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17551114, Length=551, Percent_Identity=25.2268602540835, Blast_Score=112, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17562600, Length=538, Percent_Identity=25.4646840148699, Blast_Score=109, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI193203140, Length=553, Percent_Identity=23.869801084991, Blast_Score=105, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI17539642, Length=504, Percent_Identity=24.6031746031746, Blast_Score=105, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI193204424, Length=158, Percent_Identity=29.746835443038, Blast_Score=72, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25144179, Length=141, Percent_Identity=31.2056737588652, Blast_Score=70, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI115534248, Length=131, Percent_Identity=32.0610687022901, Blast_Score=70, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6321012, Length=538, Percent_Identity=26.3940520446097, Blast_Score=112, Evalue=4e-25,
Organism=Saccharomyces cerevisiae, GI6324879, Length=527, Percent_Identity=25.0474383301708, Blast_Score=111, Evalue=7e-25,
Organism=Saccharomyces cerevisiae, GI6319300, Length=525, Percent_Identity=26.8571428571429, Blast_Score=107, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6319547, Length=524, Percent_Identity=24.0458015267176, Blast_Score=94, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6325175, Length=530, Percent_Identity=22.6415094339623, Blast_Score=80, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6323060, Length=164, Percent_Identity=31.0975609756098, Blast_Score=71, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6320541, Length=151, Percent_Identity=31.7880794701987, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6321275, Length=162, Percent_Identity=25.9259259259259, Blast_Score=69, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6319722, Length=156, Percent_Identity=29.4871794871795, Blast_Score=68, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6321289, Length=139, Percent_Identity=31.6546762589928, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322065, Length=163, Percent_Identity=32.5153374233129, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24666729, Length=534, Percent_Identity=26.2172284644195, Blast_Score=123, Evalue=6e-28,
Organism=Drosophila melanogaster, GI62472261, Length=537, Percent_Identity=25.512104283054, Blast_Score=109, Evalue=1e-23,
Organism=Drosophila melanogaster, GI281366478, Length=537, Percent_Identity=25.512104283054, Blast_Score=109, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24667055, Length=537, Percent_Identity=25.512104283054, Blast_Score=109, Evalue=1e-23,
Organism=Drosophila melanogaster, GI85724914, Length=508, Percent_Identity=25, Blast_Score=105, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24583161, Length=508, Percent_Identity=25, Blast_Score=105, Evalue=2e-22,
Organism=Drosophila melanogaster, GI221330583, Length=560, Percent_Identity=23.0357142857143, Blast_Score=102, Evalue=2e-21,
Organism=Drosophila melanogaster, GI17986031, Length=560, Percent_Identity=23.0357142857143, Blast_Score=101, Evalue=2e-21,
Organism=Drosophila melanogaster, GI17137266, Length=495, Percent_Identity=24.6464646464646, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24664914, Length=241, Percent_Identity=28.6307053941909, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17985967, Length=241, Percent_Identity=28.6307053941909, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24664907, Length=241, Percent_Identity=28.6307053941909, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28574896, Length=241, Percent_Identity=28.6307053941909, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24656962, Length=275, Percent_Identity=26.9090909090909, Blast_Score=67, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24656966, Length=275, Percent_Identity=26.9090909090909, Blast_Score=67, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000330 [H]

Pfam domain/function: PF00271 Helicase_C; PF00176 SNF2_N [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 111214; Mature: 111214

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDIPTQLSLDFETTVEPKQSNEYGFLIDEPELGLAKVTKETPTSVELFFESKEIFRTVN
CCCCCCCEECCCCCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCEEEEEECCHHHHHHHC
KSNRNLHFLNQYPESLRVSEEFPKAMELALTASQLKLTYNFNKLSSLSNSRTRLLPHQIE
CCCCCEEEHHHCCHHHCCCHHHHHHHHHHHHHHHEEEEECHHHHHHCCCCCHHCCHHHHC
STFIVANSLKPRFILADEVGLGKTIEAGLAVKELMFRRGLKRVLVVAPSPLLVQWQQEMK
CEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHH
NKFNEEFAIVRRRNFVTNGPDHWRNFNKIITSIDFIKNPRYAEEILGTKWDIVVFDEAHR
HHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCHHH
LRRDYSKITRGYLFAEKIARKTECLLLLTATPFRGKLEELFYLMHLVDPNILGPYHTFIN
HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
DYVVGQKGDLKEKISKVLLRRRKVEVGGFTKRFAKTVRIDLSPIERAFYDETTEYVKREY
HEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHH
NMAMGTKNRAIGFVMVVFQKLLDSSVIALLSALQKRKFMLESKFHYMKEHETNLDDWDLD
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
ETEGVEDFITELEDEEMSSFQRIKRELFTLNRLIHLGKQIKEDKKTQKLRETLYRLKKEG
CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HKKFIIFTQFRTTQDHLQSVLEPDFKVSPFHGSLSMDEKEVAIQKFKEDYEILICTEAGG
CCEEEEEEECCCCHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCC
EGRNLQFANILFNYDLPWSPLKIEQRIGRIHRFGQKDNVYIFNFASKDTVAERILEVLTN
CCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHH
KIRLFEESIGASDDLLGTIEEELDFNSSLMKFITGTKTKEELETEFDLRIQVAQKGFEKL
HHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHH
NALVTPKVLDFNLKDYYDHTLEEREWNNQHLEEVVSEGSKFFQNKLPGSLAVTGKGSYEY
HHHCCCHHEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEE
KNLEGKVKKATFDSDLALTNDSLEFMAFGHPFVEKVTELLTHSNVGRKKKYLYSQNLSQK
CCCCCCEEEEECCCCCEEECCCCEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCE
ILFVFQVEFDFSLKRKDLFFIEFDLKKKKSLVVTEKPKEWTEGKTYVPETEIPLSKLEEA
EEEEEEEEECCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
FIHCFPIVESEAEIKKEILRKETLSIFQKEEYKVELSHQKTIRQLEEKLMRQEAAYKWDN
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCC
RPEKKAVLHKTMKEIQRAKDEYTVEMRKIKNGAKIFHRIQLFQTYICI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMDIPTQLSLDFETTVEPKQSNEYGFLIDEPELGLAKVTKETPTSVELFFESKEIFRTVN
CCCCCCCEECCCCCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCEEEEEECCHHHHHHHC
KSNRNLHFLNQYPESLRVSEEFPKAMELALTASQLKLTYNFNKLSSLSNSRTRLLPHQIE
CCCCCEEEHHHCCHHHCCCHHHHHHHHHHHHHHHEEEEECHHHHHHCCCCCHHCCHHHHC
STFIVANSLKPRFILADEVGLGKTIEAGLAVKELMFRRGLKRVLVVAPSPLLVQWQQEMK
CEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHH
NKFNEEFAIVRRRNFVTNGPDHWRNFNKIITSIDFIKNPRYAEEILGTKWDIVVFDEAHR
HHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCHHH
LRRDYSKITRGYLFAEKIARKTECLLLLTATPFRGKLEELFYLMHLVDPNILGPYHTFIN
HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
DYVVGQKGDLKEKISKVLLRRRKVEVGGFTKRFAKTVRIDLSPIERAFYDETTEYVKREY
HEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHH
NMAMGTKNRAIGFVMVVFQKLLDSSVIALLSALQKRKFMLESKFHYMKEHETNLDDWDLD
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
ETEGVEDFITELEDEEMSSFQRIKRELFTLNRLIHLGKQIKEDKKTQKLRETLYRLKKEG
CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HKKFIIFTQFRTTQDHLQSVLEPDFKVSPFHGSLSMDEKEVAIQKFKEDYEILICTEAGG
CCEEEEEEECCCCHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCC
EGRNLQFANILFNYDLPWSPLKIEQRIGRIHRFGQKDNVYIFNFASKDTVAERILEVLTN
CCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHH
KIRLFEESIGASDDLLGTIEEELDFNSSLMKFITGTKTKEELETEFDLRIQVAQKGFEKL
HHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHH
NALVTPKVLDFNLKDYYDHTLEEREWNNQHLEEVVSEGSKFFQNKLPGSLAVTGKGSYEY
HHHCCCHHEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEE
KNLEGKVKKATFDSDLALTNDSLEFMAFGHPFVEKVTELLTHSNVGRKKKYLYSQNLSQK
CCCCCCEEEEECCCCCEEECCCCEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCE
ILFVFQVEFDFSLKRKDLFFIEFDLKKKKSLVVTEKPKEWTEGKTYVPETEIPLSKLEEA
EEEEEEEEECCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
FIHCFPIVESEAEIKKEILRKETLSIFQKEEYKVELSHQKTIRQLEEKLMRQEAAYKWDN
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCC
RPEKKAVLHKTMKEIQRAKDEYTVEMRKIKNGAKIFHRIQLFQTYICI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]