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The map label for this gene is yrbH [C]

Identifier: 183222753

GI number: 183222753

Start: 3530452

End: 3531426

Strand: Direct

Name: yrbH [C]

Synonym: LEPBI_I3411

Alternate gene names: 183222753

Gene position: 3530452-3531426 (Clockwise)

Preceding gene: 183222752

Following gene: 183222754

Centisome position: 98.08

GC content: 39.38

Gene sequence:

>975_bases
ATGAAAGAAAAAGATACTTTAGGTATAATCAAGCAAGCATTAGACGACGAAATCTCTTCCCTTGTCTATTTTAGAGAAAA
TTTAGACCCTTCTGTCAAAAACTGCATCGATTTGATTTTAAATTCGAAAGGAAAGGTGATTGTCACAGGAGTCGGTAAAT
CTGGTGACATCGCAAAAAAAATCTCACATACTCTTTCCTCCACAGGAACATCAGCGTATTTTTTACACCCAACTGACGCG
TCTCACGGAGATTCTGGAATTGTTGGTCCAGACGATGTTGTCCTTGCCATTGGAAAAAGTGGTGAATCTGAAGAACTCAA
TTATATCTTACCCACTCTTCGCAAAATTGGGGCAAAAATTGTTGGGATCACTGCAAACTCAAAATCAAAGTTAGCTGAAC
TTTCCGATGTGGTCATCATCACACCAGTATTAAAAGAAGCCTGTCCCTTAGACTTGGCGCCCACTTCGAGTACGACAATT
GCCCTTGTTTTAGGAGATGCGATTGCGGTTGCCCTTATGGAATTAAAAGAATTCAAAGCAGATGACTTTGCATTATACCA
TCCAGCGGGCCGTTTGGGTAAAAGGCTTTCATTGTACTTATCTGATGTCATGCGAAAAGGAGAACGGAATGCATCCATTC
CTGTAAACGCGAACCTGGAAGTGATCTTAAAAGAAATCACTGAAAAAGGAATTGGTGCCACAGGTGTTGTCGATGAAAAT
TTTAAACTCGTTGGTCTCATCACTGATTTCGATATTAGAAAGTACCTCACAAAACACACATTATCTCCAAGTGTGACTGC
AAAAGAAATGATGAACCCAAATCCCAATCATTATTTACCAAATGAAAAAGCTTACGATGTTCTCATCAATATGGAAGGCA
GAGAGCGCCCCATTTCTGTCGCACCAGTCGTTGATGAAAATGGGATTTTTGTTGGGATGATTTCATTACACGATTTATTA
CAAAAAGGATTATAA

Upstream 100 bases:

>100_bases
TAAAAAACAAAACCCTTGTTGTTTGTCGAATTCCAGGAGTGGAAACAATTTTTTCGTATGAAATCAATATGGACCATATG
GCTTGGGAGGAATTAATCCA

Downstream 100 bases:

>100_bases
GCTGATATGCCAGATTCATACAAAATTGTTGCTTCTGTTGGTGAAGATGAACTTCGTCACTTGCAAAAAAAAGATGTGAA
AGAAGTAGATGTGATCGAAG

Product: carbohydrate isomerase KpsF/GutQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MKEKDTLGIIKQALDDEISSLVYFRENLDPSVKNCIDLILNSKGKVIVTGVGKSGDIAKKISHTLSSTGTSAYFLHPTDA
SHGDSGIVGPDDVVLAIGKSGESEELNYILPTLRKIGAKIVGITANSKSKLAELSDVVIITPVLKEACPLDLAPTSSTTI
ALVLGDAIAVALMELKEFKADDFALYHPAGRLGKRLSLYLSDVMRKGERNASIPVNANLEVILKEITEKGIGATGVVDEN
FKLVGLITDFDIRKYLTKHTLSPSVTAKEMMNPNPNHYLPNEKAYDVLINMEGRERPISVAPVVDENGIFVGMISLHDLL
QKGL

Sequences:

>Translated_324_residues
MKEKDTLGIIKQALDDEISSLVYFRENLDPSVKNCIDLILNSKGKVIVTGVGKSGDIAKKISHTLSSTGTSAYFLHPTDA
SHGDSGIVGPDDVVLAIGKSGESEELNYILPTLRKIGAKIVGITANSKSKLAELSDVVIITPVLKEACPLDLAPTSSTTI
ALVLGDAIAVALMELKEFKADDFALYHPAGRLGKRLSLYLSDVMRKGERNASIPVNANLEVILKEITEKGIGATGVVDEN
FKLVGLITDFDIRKYLTKHTLSPSVTAKEMMNPNPNHYLPNEKAYDVLINMEGRERPISVAPVVDENGIFVGMISLHDLL
QKGL
>Mature_324_residues
MKEKDTLGIIKQALDDEISSLVYFRENLDPSVKNCIDLILNSKGKVIVTGVGKSGDIAKKISHTLSSTGTSAYFLHPTDA
SHGDSGIVGPDDVVLAIGKSGESEELNYILPTLRKIGAKIVGITANSKSKLAELSDVVIITPVLKEACPLDLAPTSSTTI
ALVLGDAIAVALMELKEFKADDFALYHPAGRLGKRLSLYLSDVMRKGERNASIPVNANLEVILKEITEKGIGATGVVDEN
FKLVGLITDFDIRKYLTKHTLSPSVTAKEMMNPNPNHYLPNEKAYDVLINMEGRERPISVAPVVDENGIFVGMISLHDLL
QKGL

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=314, Percent_Identity=38.2165605095541, Blast_Score=223, Evalue=1e-59,
Organism=Escherichia coli, GI87082151, Length=317, Percent_Identity=36.5930599369085, Blast_Score=202, Evalue=3e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 34948; Mature: 34948

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKDTLGIIKQALDDEISSLVYFRENLDPSVKNCIDLILNSKGKVIVTGVGKSGDIAKK
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH
ISHTLSSTGTSAYFLHPTDASHGDSGIVGPDDVVLAIGKSGESEELNYILPTLRKIGAKI
HHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEE
VGITANSKSKLAELSDVVIITPVLKEACPLDLAPTSSTTIALVLGDAIAVALMELKEFKA
EEEECCCHHHHHHHCCEEEEEHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCC
DDFALYHPAGRLGKRLSLYLSDVMRKGERNASIPVNANLEVILKEITEKGIGATGVVDEN
CCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCC
FKLVGLITDFDIRKYLTKHTLSPSVTAKEMMNPNPNHYLPNEKAYDVLINMEGRERPISV
EEEEEEEECHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEE
APVVDENGIFVGMISLHDLLQKGL
EEEECCCCEEEEHHHHHHHHHHCC
>Mature Secondary Structure
MKEKDTLGIIKQALDDEISSLVYFRENLDPSVKNCIDLILNSKGKVIVTGVGKSGDIAKK
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH
ISHTLSSTGTSAYFLHPTDASHGDSGIVGPDDVVLAIGKSGESEELNYILPTLRKIGAKI
HHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEE
VGITANSKSKLAELSDVVIITPVLKEACPLDLAPTSSTTIALVLGDAIAVALMELKEFKA
EEEECCCHHHHHHHCCEEEEEHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCC
DDFALYHPAGRLGKRLSLYLSDVMRKGERNASIPVNANLEVILKEITEKGIGATGVVDEN
CCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCC
FKLVGLITDFDIRKYLTKHTLSPSVTAKEMMNPNPNHYLPNEKAYDVLINMEGRERPISV
EEEEEEEECHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEE
APVVDENGIFVGMISLHDLLQKGL
EEEECCCCEEEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]