Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222751
Identifier: 183222751
GI number: 183222751
Start: 3529366
End: 3529929
Strand: Direct
Name: 183222751
Synonym: LEPBI_I3409
Alternate gene names: NA
Gene position: 3529366-3529929 (Clockwise)
Preceding gene: 183222734
Following gene: 183222752
Centisome position: 98.05
GC content: 41.84
Gene sequence:
>564_bases ATGGCATATACGGACAATGAAAATGGAGATTGCATTCTCTCCAATAAAGTTTTTCATGAACTTGGAATGCACTCAATCTT CAATGGACCCAAATATAAGGCAATTGCCCTTAGCATGGGACTCCATTTTTTGGTCCTTTTGTCGTATCTGGCAAAGGACA GCTTAAGTGACATAGATTCTACTCACATCAAACTCAAAGAAGGTGGAAGTTTTTCCGTAATCCAATTGCATATTTCCACA GGATTGGGTGAATCAAAGGAATCCGTTTCCCCTACCCAATCCGCAGACAGGGGAACCAAAACGACCGAGGACGAAATCTC GGAATTCCAAAATTGTCTGAGTTATCCCAGTTTGGCTTTGGAACAAAAACTGGAAGACCATTGTGTGTACCAACTTTCTG TGAAAGAAGATGGTTCCTTGGAAAAAATTGCAGTGGTCACCGCATGTAGGTATGCGGTTTTTGATCAACAGGTGCGACGC CAACTTTCGGAATGGAAGTTCCAATACACCAAAGGCAAAGAATTTGTTTTACCCATTAGGTTCCGTTTAGATGTCCGAGA CTAA
Upstream 100 bases:
>100_bases GGAAACGGAAGGCCCGCAGGCACTCCATCCACAACCACTCCGACGGATGTTCCGTGAGACTCTCCAAAGGTCGATACTCG AAAAATTTTTCCCCAACTTG
Downstream 100 bases:
>100_bases TCCACATTCTGAAGAAAGTGCTTGGTATATCGTTTACACGAAACCCCGAGCCGAAAAAAAACTCAGTGAACTTCTCCGTA AGTATCATATCGAAAACTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MAYTDNENGDCILSNKVFHELGMHSIFNGPKYKAIALSMGLHFLVLLSYLAKDSLSDIDSTHIKLKEGGSFSVIQLHIST GLGESKESVSPTQSADRGTKTTEDEISEFQNCLSYPSLALEQKLEDHCVYQLSVKEDGSLEKIAVVTACRYAVFDQQVRR QLSEWKFQYTKGKEFVLPIRFRLDVRD
Sequences:
>Translated_187_residues MAYTDNENGDCILSNKVFHELGMHSIFNGPKYKAIALSMGLHFLVLLSYLAKDSLSDIDSTHIKLKEGGSFSVIQLHIST GLGESKESVSPTQSADRGTKTTEDEISEFQNCLSYPSLALEQKLEDHCVYQLSVKEDGSLEKIAVVTACRYAVFDQQVRR QLSEWKFQYTKGKEFVLPIRFRLDVRD >Mature_186_residues AYTDNENGDCILSNKVFHELGMHSIFNGPKYKAIALSMGLHFLVLLSYLAKDSLSDIDSTHIKLKEGGSFSVIQLHISTG LGESKESVSPTQSADRGTKTTEDEISEFQNCLSYPSLALEQKLEDHCVYQLSVKEDGSLEKIAVVTACRYAVFDQQVRRQ LSEWKFQYTKGKEFVLPIRFRLDVRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21105; Mature: 20974
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYTDNENGDCILSNKVFHELGMHSIFNGPKYKAIALSMGLHFLVLLSYLAKDSLSDIDS CCCCCCCCCCEEECHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCC THIKLKEGGSFSVIQLHISTGLGESKESVSPTQSADRGTKTTEDEISEFQNCLSYPSLAL CEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHH EQKLEDHCVYQLSVKEDGSLEKIAVVTACRYAVFDQQVRRQLSEWKFQYTKGKEFVLPIR HHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEE FRLDVRD EEEEECC >Mature Secondary Structure AYTDNENGDCILSNKVFHELGMHSIFNGPKYKAIALSMGLHFLVLLSYLAKDSLSDIDS CCCCCCCCCEEECHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCC THIKLKEGGSFSVIQLHISTGLGESKESVSPTQSADRGTKTTEDEISEFQNCLSYPSLAL CEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHH EQKLEDHCVYQLSVKEDGSLEKIAVVTACRYAVFDQQVRRQLSEWKFQYTKGKEFVLPIR HHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEE FRLDVRD EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA