Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222622
Identifier: 183222622
GI number: 183222622
Start: 3389405
End: 3389770
Strand: Direct
Name: 183222622
Synonym: LEPBI_I3277
Alternate gene names: NA
Gene position: 3389405-3389770 (Clockwise)
Preceding gene: 183222620
Following gene: 183222623
Centisome position: 94.16
GC content: 38.25
Gene sequence:
>366_bases ATGTCACAAAAAAAAGCACTTATAGTAGATGATAGTACTGTCACCCGTTTGATGATCCGAAAGATCATATCCGAAGAATA CCCGAATTGGGAGATTTTGGAAGCAGAATCGGCGGATAAAGCAAAATCGATCTTACCTGATCATCCTGACATTGATTTAT TTAGTTTGGATCAAAATATGCCGGGGACACTTTCCGGTCTTGATTTAGTTGAGAATCTTAAGTCAAATTATCCCAAATCC AAAATCGTACTCATTACCGCCAACATCCAAGATGCTATCAAAAACAAAGCAAAGGATCTTGGGATTCTGTTTATTGAAAA ACCGATCACCCGGGACAAACTCATTCCCCTTTTGGAAACTATATGA
Upstream 100 bases:
>100_bases ATGAAGTATTTAGAACGCATGGATGACTTAAGAGATTTTTTTTCGTCCATTCTGTGTGTACGTACTCATATAAAACCAGT TTGGAATTAAAGCAATCGAT
Downstream 100 bases:
>100_bases ATCACCTGACGGAACTGGAACAAGATTCATTGTGTGAACTTTTTAACATTAGTTTGGGTGGTGCAGCCAAATTGATGAGT GAAATGATTTCAGATGAAAT
Product: putative response receiver
Products: NA
Alternate protein names: Response Regulator Receiver Domain-Containing Protein; Two-Component Response Regulator; Chemotaxis Protein CheC; Response Regulator Receiver; Response Receiver; FOG CheY-Like Receiver
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSQKKALIVDDSTVTRLMIRKIISEEYPNWEILEAESADKAKSILPDHPDIDLFSLDQNMPGTLSGLDLVENLKSNYPKS KIVLITANIQDAIKNKAKDLGILFIEKPITRDKLIPLLETI
Sequences:
>Translated_121_residues MSQKKALIVDDSTVTRLMIRKIISEEYPNWEILEAESADKAKSILPDHPDIDLFSLDQNMPGTLSGLDLVENLKSNYPKS KIVLITANIQDAIKNKAKDLGILFIEKPITRDKLIPLLETI >Mature_120_residues SQKKALIVDDSTVTRLMIRKIISEEYPNWEILEAESADKAKSILPDHPDIDLFSLDQNMPGTLSGLDLVENLKSNYPKSK IVLITANIQDAIKNKAKDLGILFIEKPITRDKLIPLLETI
Specific function: Unknown
COG id: COG2197
COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13615; Mature: 13484
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKKALIVDDSTVTRLMIRKIISEEYPNWEILEAESADKAKSILPDHPDIDLFSLDQNM CCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCCCCCEEEECCCCC PGTLSGLDLVENLKSNYPKSKIVLITANIQDAIKNKAKDLGILFIEKPITRDKLIPLLET CCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHC I C >Mature Secondary Structure SQKKALIVDDSTVTRLMIRKIISEEYPNWEILEAESADKAKSILPDHPDIDLFSLDQNM CCCCEEEEECHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCCCCCEEEECCCCC PGTLSGLDLVENLKSNYPKSKIVLITANIQDAIKNKAKDLGILFIEKPITRDKLIPLLET CCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHC I C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA