Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222575
Identifier: 183222575
GI number: 183222575
Start: 3341766
End: 3344135
Strand: Direct
Name: 183222575
Synonym: LEPBI_I3230
Alternate gene names: NA
Gene position: 3341766-3344135 (Clockwise)
Preceding gene: 183222574
Following gene: 183222576
Centisome position: 92.84
GC content: 32.87
Gene sequence:
>2370_bases ATGAGAGAACTAGCGATCACCATCCTCTCATCCCTTTTATTTTTTTTAATTTTATTTTTTTCCGTCATTGGAGTTCAAAA TAGCTCCAAAAGATTACCTTTTTATCATTACCCATCTGGACTCATCGTCAATATTGGGGAAGAAAACAAATCCCATTGGG GCAATTCCATTCTCACTTCTGACTTAGAAAAATTTGATTCGATTCAAGATTTTTCAAATATAAATTCTTATCGACTTAAT ATCCAAAGTTCAAATGGAACAATTTATCAAGAAGATTTTAAATTAAAGAATGTTCGCAAAACTGATGTTTTAGGAGTATT TTTTTCAGATTTATTTTTGGCATTTTTTAGTTTGGCAATTGCCGTTTATTTTTATTACTCTACACGTGATGCATTGATCT TTGGTTTTTTCTTTAATTTTGGTCTCATCATCCTTTCGAATGTATTTGTTTTAGCATTTAAAAATTCGATTTTTTTATTC ATACTTACTTTGTATTTGGGAAGTTTTCTCCAATACCATTTGATCTACAGATTAAGAGGGAAAGAAATCAATTCCAAATG GTTATTACCTCAAGTATTGATCTCCTTTATCATGGCAATGATTGCCTCTCAAGAAAGATATGATATGATTTTGATAGAAC GCATCGCAATTGTTGCCCATGCGATTACGGTTTTATTTGGATCTATCAATATCATTGCCAATGTATTCGAGTTAATTCGA TCAAAACCACAAGGGGAAGCACTTCTAAAACGTTTGTTACTCGTGTTTTCGATCATTCTTTATGTGGCATTACCATCGAG TATTTTATTTTTTGATGGCTATCCTTGGTTTTATGTGCATCGATCCTTTTTTATTTTCACATACTTATTATTCATCTTAA GTTTTTTTTACGGAACCTATCGTTATACCTTTGTTCCTTCATTTGTGATCTTTACTCCAAGTATTGTCACATTAATTTTA GTGGGAATTATTCTTGGAACTTACATCGGCGCTATATTTGTTTTAGATTATATTTTGCCCATACGTTACCTAAAAGATCG ATGGGTTTTTAATTTTATCTTTTTGTTTTTAGTAACCGCTTATTTGATTCCATTAAAATTAAAGGTAAAAGAATTTTTTG ATTTATGGTTTTTCGAAAAAAACCATAAACTAAGTGCTGGAATCAACAAAATTACCGCACTATTATCATCACCTCTTTCG ATGAGAAAAACAATTCTCACAATCAACAGAACAGTAAAAGAAACAGTAAACGTTTCCAATTTAATCATTCTCATTCCCGG TGATCAATTTGCAAATACTGATCTAAGGAATATAGATTTTATGAGAATTTCTCCTCAATCAGAAATTTGGAATTATTTCA AAAGCACGGATCGTGTCACTGTCACTTCTCATTTAGAATATGGAATTGGACTAAGAGAAACTTTATATAATTTTTTGAAA GGATTACAAGTCCAACTCGCATTTCCCGCTTACGATTCTTCTTCTAATAAAAAAAATATCCAAGCGATGATATTGATCGG AGAAAAATTAGATAAAAAATATTTTTCTATCGGAGAATTAAAATTCATCAATGAAGTTGTTAAAATATCAGGGATGTTAC TCGAGAACTATAGTTTACTGGAAGATGAAATCCAAAAACGTAAAATTGTAAGAGACATCCAAACTGCATCTATAGTCGAC AATACATTACGTTTGATTCTTCCTAGTGAAGTCAAAGGAATCGATTATGGTTATATATCAAAACCAGCTGTTGGAATATC CGGAGACTATTTGGACATTATTCCTGTTTCCAATACCAAAATGATAGTTTTGTTAGGTGATGTGGCTGGGCATGGTTTGG GAACTGGATTTTTAGTCAGTGCGATCAAAGGCATTGTGAGAGAACAATTACGGAACGGTACATCTCTTGAAGGTCTATTT CGCGAGATCAATTCCTTCTTTCGTGCAAGATACAAGGGCAATGAATTTATGACTCTTCTCGGTGGGATTTTTGATTCCAC AGAAAACGTATTTAAGTATGTCAATGCAGGACATCTTTCCTTAATTGAAATGCGGGCTGACGGCCAAATCAAATTACATT CTAAAACACAACGAGTTTTGGGAATTTTAGAGACGGATTACCATGTCCAAGAATTAAAATTACTACCAGGTACAAAACTT TTTCTTTATTCCGATGGAATCTCGGAAGCCTTTAGTGAACGAGATGAAATTTTCGGTGAAGATACTCTCATCGATTTTTT ACACTACAATGCTGATAAATCCGTAAAAGAACTTCCGCCCCTATTGGACATTCGTATGACCCAATTCCGAGGAAACCGCG AACAATCAGACGATATCACATTTATTGGTCTTTCTTTTACTCCAAACTAG
Upstream 100 bases:
>100_bases TGGGTTGGAAAAATATGATCAGCATGGACAAGGGTCCCATTATCATACAACAACGCGGCGAACCTGTTTTAAAATTCAGT TTTACCGAGTCGGAAGTTTT
Downstream 100 bases:
>100_bases CCGATAGTAAAACCGATGATGGCGGAAAAACCGGTTAAGTTTGTCATTTTTTTATCTCTCATCCTGAGTTTAGTCGCATT TTGGGACCACCAATTCACCT
Product: hypothetical protein
Products: NA
Alternate protein names: Serine Phosphatase; Stage II Sporulation E Family Protein; PAS/PAC Sensor Protein; Response Regulator Receiver Modulated Serine Phosphatase; Stage II Sporulation Protein E; Regulatory Protein; Serine Phosphatase RsbU Regulator Of Sigma Subunit; C Domain-Containing Protein; Sigma Factor SigB Regulation Protein RsbU; GAF Sensor-Containing Protein Serine Phosphatase; Phosphoserine Phosphatase; Phosphatase; HAMP/SpoIIE Domain-Containing Protein; Serine Phosphatase RsbU; Sigma Factor Regulatory Protein; Sigma Factor SigB Regulation Protein; Regulator Of Sigma-B Activity; Sigma Factor Regulation Protein; Regulator; Serine/Threonine Kinase; SpoIIE Domain-Containing Protein; HAMP Domain-Containing Protein; Response Regulator Receiver Protein; Phosphodiesterase Or Phosphatase; IcfG-Like Protein; Pas/Pac Sensor Protein; PAS Sensor Protein; Two-Component Response Regulator; Serine Phosphotase RsbU Sigma Factor Regulatory Protein; Phosphoserine Phosphatase RsbU; Phosphoserine Phosphatase RsbP; Sigma-B Regulation Protein; Serine/Threonine Kinase Protein; C-Like Stage II Sporulation E; Phytochrome Sensor Protein; Serine Phosphatase RsbU Regulator Sigma Subunit; Sensory Box/Response Regulator; GAF Sensor Protein; Two-Component System Response Regulator; Serine/Threonine Phosphatase; Sigma Regulatory RsbW Antagonist; Serine/Threonine Phosphatase Family Protein; Magnesium Or Manganese-Dependent Protein Phosphatase; CBS Domain Pair-Containing PP2C Family Phosphatase
Number of amino acids: Translated: 789; Mature: 789
Protein sequence:
>789_residues MRELAITILSSLLFFLILFFSVIGVQNSSKRLPFYHYPSGLIVNIGEENKSHWGNSILTSDLEKFDSIQDFSNINSYRLN IQSSNGTIYQEDFKLKNVRKTDVLGVFFSDLFLAFFSLAIAVYFYYSTRDALIFGFFFNFGLIILSNVFVLAFKNSIFLF ILTLYLGSFLQYHLIYRLRGKEINSKWLLPQVLISFIMAMIASQERYDMILIERIAIVAHAITVLFGSINIIANVFELIR SKPQGEALLKRLLLVFSIILYVALPSSILFFDGYPWFYVHRSFFIFTYLLFILSFFYGTYRYTFVPSFVIFTPSIVTLIL VGIILGTYIGAIFVLDYILPIRYLKDRWVFNFIFLFLVTAYLIPLKLKVKEFFDLWFFEKNHKLSAGINKITALLSSPLS MRKTILTINRTVKETVNVSNLIILIPGDQFANTDLRNIDFMRISPQSEIWNYFKSTDRVTVTSHLEYGIGLRETLYNFLK GLQVQLAFPAYDSSSNKKNIQAMILIGEKLDKKYFSIGELKFINEVVKISGMLLENYSLLEDEIQKRKIVRDIQTASIVD NTLRLILPSEVKGIDYGYISKPAVGISGDYLDIIPVSNTKMIVLLGDVAGHGLGTGFLVSAIKGIVREQLRNGTSLEGLF REINSFFRARYKGNEFMTLLGGIFDSTENVFKYVNAGHLSLIEMRADGQIKLHSKTQRVLGILETDYHVQELKLLPGTKL FLYSDGISEAFSERDEIFGEDTLIDFLHYNADKSVKELPPLLDIRMTQFRGNREQSDDITFIGLSFTPN
Sequences:
>Translated_789_residues MRELAITILSSLLFFLILFFSVIGVQNSSKRLPFYHYPSGLIVNIGEENKSHWGNSILTSDLEKFDSIQDFSNINSYRLN IQSSNGTIYQEDFKLKNVRKTDVLGVFFSDLFLAFFSLAIAVYFYYSTRDALIFGFFFNFGLIILSNVFVLAFKNSIFLF ILTLYLGSFLQYHLIYRLRGKEINSKWLLPQVLISFIMAMIASQERYDMILIERIAIVAHAITVLFGSINIIANVFELIR SKPQGEALLKRLLLVFSIILYVALPSSILFFDGYPWFYVHRSFFIFTYLLFILSFFYGTYRYTFVPSFVIFTPSIVTLIL VGIILGTYIGAIFVLDYILPIRYLKDRWVFNFIFLFLVTAYLIPLKLKVKEFFDLWFFEKNHKLSAGINKITALLSSPLS MRKTILTINRTVKETVNVSNLIILIPGDQFANTDLRNIDFMRISPQSEIWNYFKSTDRVTVTSHLEYGIGLRETLYNFLK GLQVQLAFPAYDSSSNKKNIQAMILIGEKLDKKYFSIGELKFINEVVKISGMLLENYSLLEDEIQKRKIVRDIQTASIVD NTLRLILPSEVKGIDYGYISKPAVGISGDYLDIIPVSNTKMIVLLGDVAGHGLGTGFLVSAIKGIVREQLRNGTSLEGLF REINSFFRARYKGNEFMTLLGGIFDSTENVFKYVNAGHLSLIEMRADGQIKLHSKTQRVLGILETDYHVQELKLLPGTKL FLYSDGISEAFSERDEIFGEDTLIDFLHYNADKSVKELPPLLDIRMTQFRGNREQSDDITFIGLSFTPN >Mature_789_residues MRELAITILSSLLFFLILFFSVIGVQNSSKRLPFYHYPSGLIVNIGEENKSHWGNSILTSDLEKFDSIQDFSNINSYRLN IQSSNGTIYQEDFKLKNVRKTDVLGVFFSDLFLAFFSLAIAVYFYYSTRDALIFGFFFNFGLIILSNVFVLAFKNSIFLF ILTLYLGSFLQYHLIYRLRGKEINSKWLLPQVLISFIMAMIASQERYDMILIERIAIVAHAITVLFGSINIIANVFELIR SKPQGEALLKRLLLVFSIILYVALPSSILFFDGYPWFYVHRSFFIFTYLLFILSFFYGTYRYTFVPSFVIFTPSIVTLIL VGIILGTYIGAIFVLDYILPIRYLKDRWVFNFIFLFLVTAYLIPLKLKVKEFFDLWFFEKNHKLSAGINKITALLSSPLS MRKTILTINRTVKETVNVSNLIILIPGDQFANTDLRNIDFMRISPQSEIWNYFKSTDRVTVTSHLEYGIGLRETLYNFLK GLQVQLAFPAYDSSSNKKNIQAMILIGEKLDKKYFSIGELKFINEVVKISGMLLENYSLLEDEIQKRKIVRDIQTASIVD NTLRLILPSEVKGIDYGYISKPAVGISGDYLDIIPVSNTKMIVLLGDVAGHGLGTGFLVSAIKGIVREQLRNGTSLEGLF REINSFFRARYKGNEFMTLLGGIFDSTENVFKYVNAGHLSLIEMRADGQIKLHSKTQRVLGILETDYHVQELKLLPGTKL FLYSDGISEAFSERDEIFGEDTLIDFLHYNADKSVKELPPLLDIRMTQFRGNREQSDDITFIGLSFTPN
Specific function: Unknown
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90482; Mature: 90482
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRELAITILSSLLFFLILFFSVIGVQNSSKRLPFYHYPSGLIVNIGEENKSHWGNSILTS CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCHHHHH DLEKFDSIQDFSNINSYRLNIQSSNGTIYQEDFKLKNVRKTDVLGVFFSDLFLAFFSLAI HHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AVYFYYSTRDALIFGFFFNFGLIILSNVFVLAFKNSIFLFILTLYLGSFLQYHLIYRLRG HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC KEINSKWLLPQVLISFIMAMIASQERYDMILIERIAIVAHAITVLFGSINIIANVFELIR CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKPQGEALLKRLLLVFSIILYVALPSSILFFDGYPWFYVHRSFFIFTYLLFILSFFYGTY CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH RYTFVPSFVIFTPSIVTLILVGIILGTYIGAIFVLDYILPIRYLKDRWVFNFIFLFLVTA HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLIPLKLKVKEFFDLWFFEKNHKLSAGINKITALLSSPLSMRKTILTINRTVKETVNVSN HHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCE LIILIPGDQFANTDLRNIDFMRISPQSEIWNYFKSTDRVTVTSHLEYGIGLRETLYNFLK EEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHC GLQVQLAFPAYDSSSNKKNIQAMILIGEKLDKKYFSIGELKFINEVVKISGMLLENYSLL CCEEEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH EDEIQKRKIVRDIQTASIVDNTLRLILPSEVKGIDYGYISKPAVGISGDYLDIIPVSNTK HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCE MIVLLGDVAGHGLGTGFLVSAIKGIVREQLRNGTSLEGLFREINSFFRARYKGNEFMTLL EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHH GGIFDSTENVFKYVNAGHLSLIEMRADGQIKLHSKTQRVLGILETDYHVQELKLLPGTKL HHHHCCHHHHHHHHCCCCEEEEEEECCCEEEECCHHHHHHHHHCCCCCHHHEEECCCCEE FLYSDGISEAFSERDEIFGEDTLIDFLHYNADKSVKELPPLLDIRMTQFRGNREQSDDIT EEEECCHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCEE FIGLSFTPN EEEEEECCC >Mature Secondary Structure MRELAITILSSLLFFLILFFSVIGVQNSSKRLPFYHYPSGLIVNIGEENKSHWGNSILTS CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCHHHHH DLEKFDSIQDFSNINSYRLNIQSSNGTIYQEDFKLKNVRKTDVLGVFFSDLFLAFFSLAI HHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AVYFYYSTRDALIFGFFFNFGLIILSNVFVLAFKNSIFLFILTLYLGSFLQYHLIYRLRG HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC KEINSKWLLPQVLISFIMAMIASQERYDMILIERIAIVAHAITVLFGSINIIANVFELIR CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKPQGEALLKRLLLVFSIILYVALPSSILFFDGYPWFYVHRSFFIFTYLLFILSFFYGTY CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH RYTFVPSFVIFTPSIVTLILVGIILGTYIGAIFVLDYILPIRYLKDRWVFNFIFLFLVTA HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLIPLKLKVKEFFDLWFFEKNHKLSAGINKITALLSSPLSMRKTILTINRTVKETVNVSN HHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCE LIILIPGDQFANTDLRNIDFMRISPQSEIWNYFKSTDRVTVTSHLEYGIGLRETLYNFLK EEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHC GLQVQLAFPAYDSSSNKKNIQAMILIGEKLDKKYFSIGELKFINEVVKISGMLLENYSLL CCEEEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH EDEIQKRKIVRDIQTASIVDNTLRLILPSEVKGIDYGYISKPAVGISGDYLDIIPVSNTK HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCE MIVLLGDVAGHGLGTGFLVSAIKGIVREQLRNGTSLEGLFREINSFFRARYKGNEFMTLL EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHH GGIFDSTENVFKYVNAGHLSLIEMRADGQIKLHSKTQRVLGILETDYHVQELKLLPGTKL HHHHCCHHHHHHHHCCCCEEEEEEECCCEEEECCHHHHHHHHHCCCCCHHHEEECCCCEE FLYSDGISEAFSERDEIFGEDTLIDFLHYNADKSVKELPPLLDIRMTQFRGNREQSDDIT EEEECCHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCEE FIGLSFTPN EEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA