| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222544
Identifier: 183222544
GI number: 183222544
Start: 3314953
End: 3316230
Strand: Direct
Name: 183222544
Synonym: LEPBI_I3199
Alternate gene names: NA
Gene position: 3314953-3316230 (Clockwise)
Preceding gene: 183222543
Following gene: 183222550
Centisome position: 92.09
GC content: 33.65
Gene sequence:
>1278_bases ATGCAAAAAATCAAAAAAATCTTTCAAATATTAAAGGCAGAACTCAAAAAAGAAGGAGTATTAAAAAACTCTTTCTTTGT CAGTAGCTCTAAAGCGATTTCTGCTGTTACAAACCTTGTATTTATGATTTATTCCGTCAATTTGCTGAGCAAAGTTGAAA ACGGAAAACTCCAATACTTCCTTGGATTCCTACCAGTTGTCCTTGCTGTTGCCGAATTTGGATTGCCCAATGCACTTATA AAATACATCTCTCCAATGGCAGAGAAAAAAGAAAATCCAGGTGCCATCTTAAACGCTTCTCTCCGAATTAAATTTTACTC TTTTTTATTTTTATCTTTTGTTACATTGATCGCTTATATCACAAGTGATGAAAACTATTTAGTCTTATTACTTTTGTTAT TTGGTGGAATCATCATTTCTTTTATCTCGTATTTTGAAAGTTTATTCGTATCATACAGAAAGTATAAATCATTATCTCTT TGGAATCCTCTTCCCAATGTAGTTCGTTTATTACTTCTCATTTATTTTTCAGAAACAAATTCACATCCATTGACTTACAT GGATATTTTAGCAATTTTTTGTATTGCTCCCATTTTTGTTTTATTCTTATTTTTTTTATTCTTCGGGAAAGAGGAAATTT CATTTTCAGCCGAAGCAAAAGAAATCCATCTCAATGAAAAGAAACTTCTCCTTTTTAATTTGTGGGCATTTGCTGCCTCC ATTTTTGCCATTTTATCGGATCGGATGGAAATTTTCTTTTTAAACCAATTCCATCCACCAGAAATTGTAGCAGATTATGG AACCGCCTTGCAACTGTTTAGCGGATTTATCATTATCCTCGCCACATTCAATTCAATCATTTATCCAAAATTAGCAAGGC TTGCGGAAACGGAAGAATTCCCAACAGTTCTTAAAAAATCTGTTTTTTTAGGTGGGATGATCGCTCTTTGTTTGGCACCA GGCATTTTACTTGCTGAACCCATCTTGACTTTGTTATTCGGAACAAAATATACCAATTCGATTTCAGTTTTTAAAATTCT TTATCCAAATTTTCTTTTACAATTGGTATTTGCTCCATTAGGTACAGCTTTGTTTGCTTTGGGATTACCAAGATTACTAG CGGGACTTGCTTTACTCAGACTCGTATTTGGAGCTCTTTTTGATTATTGGATCATTCCAGATTTTGGGGCAAACGGCGCC GCAGTTTCTTTGTTTTTAGGTCAAATCGTATCTTGGTTACTATTGACCGGATACTTTATGGCTTACTTTCGGAAATAA
Upstream 100 bases:
>100_bases GCGTTATATTCGTTATTTAGTAGTAGGATTTGCCTTAGTTTGTATCGTTCCACTAGTTTTACAAAAGATACAAAAAGGAA AGTTTTTGCAAAACTAGTTC
Downstream 100 bases:
>100_bases CATATTCATAAATCTTTTGGTAATTTATTATCAGTTTTTCCCACTCATTTGGACTTAGATTTGTCCCATATAACTTTTGA TAGGCTTCCTTGGCAGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MQKIKKIFQILKAELKKEGVLKNSFFVSSSKAISAVTNLVFMIYSVNLLSKVENGKLQYFLGFLPVVLAVAEFGLPNALI KYISPMAEKKENPGAILNASLRIKFYSFLFLSFVTLIAYITSDENYLVLLLLLFGGIIISFISYFESLFVSYRKYKSLSL WNPLPNVVRLLLLIYFSETNSHPLTYMDILAIFCIAPIFVLFLFFLFFGKEEISFSAEAKEIHLNEKKLLLFNLWAFAAS IFAILSDRMEIFFLNQFHPPEIVADYGTALQLFSGFIIILATFNSIIYPKLARLAETEEFPTVLKKSVFLGGMIALCLAP GILLAEPILTLLFGTKYTNSISVFKILYPNFLLQLVFAPLGTALFALGLPRLLAGLALLRLVFGALFDYWIIPDFGANGA AVSLFLGQIVSWLLLTGYFMAYFRK
Sequences:
>Translated_425_residues MQKIKKIFQILKAELKKEGVLKNSFFVSSSKAISAVTNLVFMIYSVNLLSKVENGKLQYFLGFLPVVLAVAEFGLPNALI KYISPMAEKKENPGAILNASLRIKFYSFLFLSFVTLIAYITSDENYLVLLLLLFGGIIISFISYFESLFVSYRKYKSLSL WNPLPNVVRLLLLIYFSETNSHPLTYMDILAIFCIAPIFVLFLFFLFFGKEEISFSAEAKEIHLNEKKLLLFNLWAFAAS IFAILSDRMEIFFLNQFHPPEIVADYGTALQLFSGFIIILATFNSIIYPKLARLAETEEFPTVLKKSVFLGGMIALCLAP GILLAEPILTLLFGTKYTNSISVFKILYPNFLLQLVFAPLGTALFALGLPRLLAGLALLRLVFGALFDYWIIPDFGANGA AVSLFLGQIVSWLLLTGYFMAYFRK >Mature_425_residues MQKIKKIFQILKAELKKEGVLKNSFFVSSSKAISAVTNLVFMIYSVNLLSKVENGKLQYFLGFLPVVLAVAEFGLPNALI KYISPMAEKKENPGAILNASLRIKFYSFLFLSFVTLIAYITSDENYLVLLLLLFGGIIISFISYFESLFVSYRKYKSLSL WNPLPNVVRLLLLIYFSETNSHPLTYMDILAIFCIAPIFVLFLFFLFFGKEEISFSAEAKEIHLNEKKLLLFNLWAFAAS IFAILSDRMEIFFLNQFHPPEIVADYGTALQLFSGFIIILATFNSIIYPKLARLAETEEFPTVLKKSVFLGGMIALCLAP GILLAEPILTLLFGTKYTNSISVFKILYPNFLLQLVFAPLGTALFALGLPRLLAGLALLRLVFGALFDYWIIPDFGANGA AVSLFLGQIVSWLLLTGYFMAYFRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47896; Mature: 47896
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKIKKIFQILKAELKKEGVLKNSFFVSSSKAISAVTNLVFMIYSVNLLSKVENGKLQYF CHHHHHHHHHHHHHHHHCCCHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LGFLPVVLAVAEFGLPNALIKYISPMAEKKENPGAILNASLRIKFYSFLFLSFVTLIAYI HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH TSDENYLVLLLLLFGGIIISFISYFESLFVSYRKYKSLSLWNPLPNVVRLLLLIYFSETN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHCCC SHPLTYMDILAIFCIAPIFVLFLFFLFFGKEEISFSAEAKEIHLNEKKLLLFNLWAFAAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHEECCCCHHHHHHHHHHHHH IFAILSDRMEIFFLNQFHPPEIVADYGTALQLFSGFIIILATFNSIIYPKLARLAETEEF HHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PTVLKKSVFLGGMIALCLAPGILLAEPILTLLFGTKYTNSISVFKILYPNFLLQLVFAPL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH GTALFALGLPRLLAGLALLRLVFGALFDYWIIPDFGANGAAVSLFLGQIVSWLLLTGYFM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AYFRK HHHCC >Mature Secondary Structure MQKIKKIFQILKAELKKEGVLKNSFFVSSSKAISAVTNLVFMIYSVNLLSKVENGKLQYF CHHHHHHHHHHHHHHHHCCCHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LGFLPVVLAVAEFGLPNALIKYISPMAEKKENPGAILNASLRIKFYSFLFLSFVTLIAYI HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH TSDENYLVLLLLLFGGIIISFISYFESLFVSYRKYKSLSLWNPLPNVVRLLLLIYFSETN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHCCC SHPLTYMDILAIFCIAPIFVLFLFFLFFGKEEISFSAEAKEIHLNEKKLLLFNLWAFAAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHEECCCCHHHHHHHHHHHHH IFAILSDRMEIFFLNQFHPPEIVADYGTALQLFSGFIIILATFNSIIYPKLARLAETEEF HHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PTVLKKSVFLGGMIALCLAPGILLAEPILTLLFGTKYTNSISVFKILYPNFLLQLVFAPL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH GTALFALGLPRLLAGLALLRLVFGALFDYWIIPDFGANGAAVSLFLGQIVSWLLLTGYFM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AYFRK HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA