| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222529
Identifier: 183222529
GI number: 183222529
Start: 3295484
End: 3296626
Strand: Direct
Name: 183222529
Synonym: LEPBI_I3184
Alternate gene names: NA
Gene position: 3295484-3296626 (Clockwise)
Preceding gene: 183222528
Following gene: 183222530
Centisome position: 91.55
GC content: 41.38
Gene sequence:
>1143_bases ATGAATCCTATCACTCCCAAAGTTTTATACCAAGAAGCAAATCCTTATGGTTCGTTCACTGCCTTTTTAGAAGACGATAG CAGGACCATTTACCTTTATTTACAATCACATAACAACCCTGAGTGGCCGATGAAAACACTTTGGGTGCGAAACTTAATCG ATGCACCTGACCAAAGAATGGAGGAAGATTTTGATTTGGGTCTCGCACCAGTGCTCACCAAATCAGAACTCACCGATCCA AAAGCGCAAAACACACTCACCGAAGACCAAATCCACTTCATATGGTCAGAGGAAGGCGATGCAGTGGCTTTGTTTGTAGA GGAAGAACTACAAGCCTACCTACCTTCCTGGTCTGGGATCAAAGGCATTCATGGGTATTCAAAGTTTGCAAAAGAAGAAG CACCCACTGCATCCCCTCTCGGAGATCCCGACAATGGTGTGATTGCAGAACGTGTGAAAGGCAATCGTAAGTTTTGGGAA TCCGTAGCTGAAAAAGATCATTGGAAAAAAGCGCAATCACTTAGGTTGGAATTTTTGGAATCCAAACTTGGCAAACACCA AACCTATTGGTCCGCAGATGGTGGAAAGTATCCTTCTCTTGGCATCGCTTCTTTTTTACCGAAAGAATTCCCTGGGATCA AAATTTTTTCCACTGTCGGTATGAGTGTACAAAACCAACCGAGCATTGAACTCTATCATAAAGACTATGAAAATTTTTCA AGGATCGAACTTGTTTTTGCAATCCAACTTTTAAAAGATGCACCCGATAAGTCAGAAACTTGGATCCAACATGTTTTAGG TGAGATGGTCAAATTTCCTTGGAACACAGGGATTTGGTTTGGTCACTCACATACCATTCAGAACCCACGGAAAGACCCTG ATCAATTGTATTTGGATTTCAATTGGTTTGTACTTCGTAATGTCACTGAGGAACTTGACCAAGGCTCCACGGAAGTATTA CCGAAACTAAACGGACTCATCACAGAAAATGGCAAACGAGCCAACTTTCTTTTTTTAACACCGATCTCAACAGAAGAACG AATTTGTTTTATGAGAGAAGGTTCCCAAAAGTTTTGGGAGACTTGGAAAAAGGAAACGTATGGTTTTTTTCATGATTCAG AACGGCGAATGTTAGAATTCTAG
Upstream 100 bases:
>100_bases CTGGGTATTACCCTGACATCTATTTTGAACCAGGTATGGATGAAACCATTTCCAAACTACTTGCAAAAATCAATGAGAGA GTGGTCCCACACAAATTTTA
Downstream 100 bases:
>100_bases TTCTACTTTTCAAAAAAAATCCGAATCAAACTCTAAATTCTGACCGTTACTCAATATGATATGGCAGAGACGTATACAAA GTACTTCAATTTAGAGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MNPITPKVLYQEANPYGSFTAFLEDDSRTIYLYLQSHNNPEWPMKTLWVRNLIDAPDQRMEEDFDLGLAPVLTKSELTDP KAQNTLTEDQIHFIWSEEGDAVALFVEEELQAYLPSWSGIKGIHGYSKFAKEEAPTASPLGDPDNGVIAERVKGNRKFWE SVAEKDHWKKAQSLRLEFLESKLGKHQTYWSADGGKYPSLGIASFLPKEFPGIKIFSTVGMSVQNQPSIELYHKDYENFS RIELVFAIQLLKDAPDKSETWIQHVLGEMVKFPWNTGIWFGHSHTIQNPRKDPDQLYLDFNWFVLRNVTEELDQGSTEVL PKLNGLITENGKRANFLFLTPISTEERICFMREGSQKFWETWKKETYGFFHDSERRMLEF
Sequences:
>Translated_380_residues MNPITPKVLYQEANPYGSFTAFLEDDSRTIYLYLQSHNNPEWPMKTLWVRNLIDAPDQRMEEDFDLGLAPVLTKSELTDP KAQNTLTEDQIHFIWSEEGDAVALFVEEELQAYLPSWSGIKGIHGYSKFAKEEAPTASPLGDPDNGVIAERVKGNRKFWE SVAEKDHWKKAQSLRLEFLESKLGKHQTYWSADGGKYPSLGIASFLPKEFPGIKIFSTVGMSVQNQPSIELYHKDYENFS RIELVFAIQLLKDAPDKSETWIQHVLGEMVKFPWNTGIWFGHSHTIQNPRKDPDQLYLDFNWFVLRNVTEELDQGSTEVL PKLNGLITENGKRANFLFLTPISTEERICFMREGSQKFWETWKKETYGFFHDSERRMLEF >Mature_380_residues MNPITPKVLYQEANPYGSFTAFLEDDSRTIYLYLQSHNNPEWPMKTLWVRNLIDAPDQRMEEDFDLGLAPVLTKSELTDP KAQNTLTEDQIHFIWSEEGDAVALFVEEELQAYLPSWSGIKGIHGYSKFAKEEAPTASPLGDPDNGVIAERVKGNRKFWE SVAEKDHWKKAQSLRLEFLESKLGKHQTYWSADGGKYPSLGIASFLPKEFPGIKIFSTVGMSVQNQPSIELYHKDYENFS RIELVFAIQLLKDAPDKSETWIQHVLGEMVKFPWNTGIWFGHSHTIQNPRKDPDQLYLDFNWFVLRNVTEELDQGSTEVL PKLNGLITENGKRANFLFLTPISTEERICFMREGSQKFWETWKKETYGFFHDSERRMLEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44047; Mature: 44047
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPITPKVLYQEANPYGSFTAFLEDDSRTIYLYLQSHNNPEWPMKTLWVRNLIDAPDQRM CCCCCCHHEEECCCCCCCEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHH EEDFDLGLAPVLTKSELTDPKAQNTLTEDQIHFIWSEEGDAVALFVEEELQAYLPSWSGI HHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCEEEEEEEHHHHHHCCCCCCC KGIHGYSKFAKEEAPTASPLGDPDNGVIAERVKGNRKFWESVAEKDHWKKAQSLRLEFLE CCCCHHHHHHHHCCCCCCCCCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SKLGKHQTYWSADGGKYPSLGIASFLPKEFPGIKIFSTVGMSVQNQPSIELYHKDYENFS HHHCCCCEEECCCCCCCCCCCHHHHCHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCHH RIELVFAIQLLKDAPDKSETWIQHVLGEMVKFPWNTGIWFGHSHTIQNPRKDPDQLYLDF HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCEEEEE NWFVLRNVTEELDQGSTEVLPKLNGLITENGKRANFLFLTPISTEERICFMREGSQKFWE HHHHHHHHHHHHHCCCHHHHHHHCCEEECCCCEEEEEEEECCCCCCCEEEEECCCHHHHH TWKKETYGFFHDSERRMLEF HHHHHHCCCEECCCHHHCCC >Mature Secondary Structure MNPITPKVLYQEANPYGSFTAFLEDDSRTIYLYLQSHNNPEWPMKTLWVRNLIDAPDQRM CCCCCCHHEEECCCCCCCEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHH EEDFDLGLAPVLTKSELTDPKAQNTLTEDQIHFIWSEEGDAVALFVEEELQAYLPSWSGI HHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCEEEEEEEHHHHHHCCCCCCC KGIHGYSKFAKEEAPTASPLGDPDNGVIAERVKGNRKFWESVAEKDHWKKAQSLRLEFLE CCCCHHHHHHHHCCCCCCCCCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SKLGKHQTYWSADGGKYPSLGIASFLPKEFPGIKIFSTVGMSVQNQPSIELYHKDYENFS HHHCCCCEEECCCCCCCCCCCHHHHCHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCHH RIELVFAIQLLKDAPDKSETWIQHVLGEMVKFPWNTGIWFGHSHTIQNPRKDPDQLYLDF HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCEEEEE NWFVLRNVTEELDQGSTEVLPKLNGLITENGKRANFLFLTPISTEERICFMREGSQKFWE HHHHHHHHHHHHHCCCHHHHHHHCCEEECCCCEEEEEEEECCCCCCCEEEEECCCHHHHH TWKKETYGFFHDSERRMLEF HHHHHHCCCEECCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA