| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222496
Identifier: 183222496
GI number: 183222496
Start: 3265020
End: 3266483
Strand: Direct
Name: 183222496
Synonym: LEPBI_I3151
Alternate gene names: NA
Gene position: 3265020-3266483 (Clockwise)
Preceding gene: 183222495
Following gene: 183222497
Centisome position: 90.7
GC content: 38.05
Gene sequence:
>1464_bases TTGAGATCTCGGGCATTCAAATCATTGTTTTTCCTTGGCATTCTTTTTGCCAGCTTTCATCTGTTTTATGGTGTGATCTA CGAAAACCATTTGGGTGAAGGAACAGACAGTGATATTTTGTACCCATATTTGTTTGCAAGAGACATTTGGATGGGAACAG GAATGGGATGGAATCTCCCACCAAGTACCACACTCTTTCCTGATATTATCTTAAGTATCCTATTGTATCCAATCACTGGT TCTGTGGAATCATTCCATCTTATCTATGGATTTTTTGTTTTTCTTTTGCCATTTGCTTTCGCCCAATCGCTTGGATTAAA AAAATCGAATTCCTATCTTGTCTCTCTCGGATTTTTGGTTTTGGCAGGTTTGGATCCGAACCAACTCGGTCAGTTTTTTT TTCCAAGCTTTCATGGAATGACATTCCTATTTGCGGCTTGGGTTTTGTATGAACTAAACAACTGGAAAGAAAAAGAGAAA CACCAATCCATACGGTTTTTGTTTCTTATGACAATGATTTGGTTGTCGGAGTATTGGTTTTTTGTCAACATAGCTCCTTT TCTTTTTGTTTTGGTTTGGATTCGTTTGCGTTGGAAATCACTCGTTCCCTTCGGAATGACTTTGTTTGGATTTTTCCTCT CAAAAATTTTCGCCAAGGGATTTTCATTTTTCGGAATTGGTATCATTAAAACGGAAAGTTTTGAACTCATTCCAAAACTA AAATCATCTCTCCTCCTAATGATCCAAAATCCAACTCAAAGTTTGGAAGGAATTCTAGCTTCGATCACAAAAGACCCTCT CATTTACCAATGGTGGGAACGATATCTCGTGATCGGCATCCTGTTTTTGATGATCACGAGCTTTCGATTTTTTGAACGAA ACCATTGGAAGGATTTTTTATTTTTCCTCTCTCCATTCGTCACCATTGTGTTTTTATATTTGTTTCAAATAGAACCTAAT ATTCGTTATTTGTACATTTTACCCTTTGGTTTTTTATATTTTTCCTTTCGTTTGATGGAACTCCATTTATGGTTTCAAAA AATTTTCCCAACTTTCATCCTTGTTGCACTTTTTATTTTTTACCTCGGGAAACATTCGGATCTCATAACAAAAATCAAAT CTGGTGAGGCCAAACGGACACATCGCATTGAATGTTTGATGGATTTTGATCCAAACGTTCCGGGAGCTTCTTCTTACTGG CCAATCAAATATATTTACGCATTTTCCGACAAAAAATGGACCCTTGTCCCCTTTACCAAGGATGGGGTGTATTACCCTTG GGTGGCCAACACCACTTGGGATGGGAGCTGGAAAGACCAACCATTCCCTTCTTTTCCATGGGGAGTGACCGAATCCAAAG AAAATCTACAAATTTGGCCGGGTGTGGAGTTGGTGAAAGAATGTGAAGGATGGTATTTTTTTCAAAGAAAGGGAAGCGGA GGAAATAACAAACCCAAGAATTGA
Upstream 100 bases:
>100_bases AATTAGATTTCCCACATCCCTTTGTTCCAGACAAACGGATTGTTGTCGAACTAGACTTCCCTGAACGATTCAAAGTCTTT GAACGCAAGTGCCCTAGTTA
Downstream 100 bases:
>100_bases ATTGATTCTAGTTTTCCCTCGAGCAGTTTAGGACAGGTTATGATAGAACTCCTTTCCGATCCTTCCCTTTGGCTTGCCCT CTTCACCTTAACTGCTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MRSRAFKSLFFLGILFASFHLFYGVIYENHLGEGTDSDILYPYLFARDIWMGTGMGWNLPPSTTLFPDIILSILLYPITG SVESFHLIYGFFVFLLPFAFAQSLGLKKSNSYLVSLGFLVLAGLDPNQLGQFFFPSFHGMTFLFAAWVLYELNNWKEKEK HQSIRFLFLMTMIWLSEYWFFVNIAPFLFVLVWIRLRWKSLVPFGMTLFGFFLSKIFAKGFSFFGIGIIKTESFELIPKL KSSLLLMIQNPTQSLEGILASITKDPLIYQWWERYLVIGILFLMITSFRFFERNHWKDFLFFLSPFVTIVFLYLFQIEPN IRYLYILPFGFLYFSFRLMELHLWFQKIFPTFILVALFIFYLGKHSDLITKIKSGEAKRTHRIECLMDFDPNVPGASSYW PIKYIYAFSDKKWTLVPFTKDGVYYPWVANTTWDGSWKDQPFPSFPWGVTESKENLQIWPGVELVKECEGWYFFQRKGSG GNNKPKN
Sequences:
>Translated_487_residues MRSRAFKSLFFLGILFASFHLFYGVIYENHLGEGTDSDILYPYLFARDIWMGTGMGWNLPPSTTLFPDIILSILLYPITG SVESFHLIYGFFVFLLPFAFAQSLGLKKSNSYLVSLGFLVLAGLDPNQLGQFFFPSFHGMTFLFAAWVLYELNNWKEKEK HQSIRFLFLMTMIWLSEYWFFVNIAPFLFVLVWIRLRWKSLVPFGMTLFGFFLSKIFAKGFSFFGIGIIKTESFELIPKL KSSLLLMIQNPTQSLEGILASITKDPLIYQWWERYLVIGILFLMITSFRFFERNHWKDFLFFLSPFVTIVFLYLFQIEPN IRYLYILPFGFLYFSFRLMELHLWFQKIFPTFILVALFIFYLGKHSDLITKIKSGEAKRTHRIECLMDFDPNVPGASSYW PIKYIYAFSDKKWTLVPFTKDGVYYPWVANTTWDGSWKDQPFPSFPWGVTESKENLQIWPGVELVKECEGWYFFQRKGSG GNNKPKN >Mature_487_residues MRSRAFKSLFFLGILFASFHLFYGVIYENHLGEGTDSDILYPYLFARDIWMGTGMGWNLPPSTTLFPDIILSILLYPITG SVESFHLIYGFFVFLLPFAFAQSLGLKKSNSYLVSLGFLVLAGLDPNQLGQFFFPSFHGMTFLFAAWVLYELNNWKEKEK HQSIRFLFLMTMIWLSEYWFFVNIAPFLFVLVWIRLRWKSLVPFGMTLFGFFLSKIFAKGFSFFGIGIIKTESFELIPKL KSSLLLMIQNPTQSLEGILASITKDPLIYQWWERYLVIGILFLMITSFRFFERNHWKDFLFFLSPFVTIVFLYLFQIEPN IRYLYILPFGFLYFSFRLMELHLWFQKIFPTFILVALFIFYLGKHSDLITKIKSGEAKRTHRIECLMDFDPNVPGASSYW PIKYIYAFSDKKWTLVPFTKDGVYYPWVANTTWDGSWKDQPFPSFPWGVTESKENLQIWPGVELVKECEGWYFFQRKGSG GNNKPKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57368; Mature: 57368
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSRAFKSLFFLGILFASFHLFYGVIYENHLGEGTDSDILYPYLFARDIWMGTGMGWNLP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC PSTTLFPDIILSILLYPITGSVESFHLIYGFFVFLLPFAFAQSLGLKKSNSYLVSLGFLV CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEHHHH LAGLDPNQLGQFFFPSFHGMTFLFAAWVLYELNNWKEKEKHQSIRFLFLMTMIWLSEYWF HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH FVNIAPFLFVLVWIRLRWKSLVPFGMTLFGFFLSKIFAKGFSFFGIGIIKTESFELIPKL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHH KSSLLLMIQNPTQSLEGILASITKDPLIYQWWERYLVIGILFLMITSFRFFERNHWKDFL HCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH FFLSPFVTIVFLYLFQIEPNIRYLYILPFGFLYFSFRLMELHLWFQKIFPTFILVALFIF HHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLGKHSDLITKIKSGEAKRTHRIECLMDFDPNVPGASSYWPIKYIYAFSDKKWTLVPFTK HHCCCHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCEEEEEEEEC DGVYYPWVANTTWDGSWKDQPFPSFPWGVTESKENLQIWPGVELVKECEGWYFFQRKGSG CCEEECEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHCCCEEEEEEECCC GNNKPKN CCCCCCC >Mature Secondary Structure MRSRAFKSLFFLGILFASFHLFYGVIYENHLGEGTDSDILYPYLFARDIWMGTGMGWNLP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC PSTTLFPDIILSILLYPITGSVESFHLIYGFFVFLLPFAFAQSLGLKKSNSYLVSLGFLV CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEHHHH LAGLDPNQLGQFFFPSFHGMTFLFAAWVLYELNNWKEKEKHQSIRFLFLMTMIWLSEYWF HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH FVNIAPFLFVLVWIRLRWKSLVPFGMTLFGFFLSKIFAKGFSFFGIGIIKTESFELIPKL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHH KSSLLLMIQNPTQSLEGILASITKDPLIYQWWERYLVIGILFLMITSFRFFERNHWKDFL HCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH FFLSPFVTIVFLYLFQIEPNIRYLYILPFGFLYFSFRLMELHLWFQKIFPTFILVALFIF HHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLGKHSDLITKIKSGEAKRTHRIECLMDFDPNVPGASSYWPIKYIYAFSDKKWTLVPFTK HHCCCHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCEEEEEEEEC DGVYYPWVANTTWDGSWKDQPFPSFPWGVTESKENLQIWPGVELVKECEGWYFFQRKGSG CCEEECEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHCCCEEEEEEECCC GNNKPKN CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA