| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is ygcG [H]
Identifier: 183222377
GI number: 183222377
Start: 3144252
End: 3145166
Strand: Reverse
Name: ygcG [H]
Synonym: LEPBI_I3031
Alternate gene names: 183222377
Gene position: 3145166-3144252 (Counterclockwise)
Preceding gene: 183222378
Following gene: 183222376
Centisome position: 87.37
GC content: 38.8
Gene sequence:
>915_bases TTGGTTTTTTTTATTCTCTTGTTTCCTATTTTTCTCATTTCTAAAGATGTTCCCAAATTAAAAGCAAGAGTGATGGATGA GACGTGGACTCTTAATGCTGATTTTGTTTCTGCTTTAGAAAAACAACTGAAAGATCATGAGAGAAAAACATCGAACCAAA TTGCAGTATATATCATCCCTTCATTGGAAGGTGAGACTTTGGAGGAATACTCCATAAAGGTCGCCGAAACTTGGAAATTA GGCCAAAAAGGAAAAGACAATGGTGTACTACTTCTTGTCGCAATAGAAGACAGAAAACTTAGAATTGAAGTTGGATATGG ATTGGAGGGAGTGTTAACAGATGTTCTGTGTCGCCATATCATCGAGAATGAGATCAAACCTTCTTTCAAAAAAGGTGAGT ATGATGTGGGGATCCAAAATGGCGTCAAAACAATCATGAATGCCATCGAAGGTGAGTACCAGATACCAGAACCAAAGGAT TATTCTCATCTCGGCCCACTTTCATTTTTAGGTGAACTTTCTCATGGAAGCGAAGAAATTCCCATCGGATTACGAATTTT TTTATCATTTTTTATTGTTTTTGTTTTGGGGATATTTACATATTTTGCAGCAAACGCTCCTTATGTTGGTTGGTTTATTT ATTTCTTTTTGTTTCCTTTTTGGAGTTTATTTCCTACAGCCATCCACGGTGCCAATATTGGAGCGACCGTTTTTTTGATT TATGCGATTGGAATTGGTATCTACAAACTTTATCATCTTTTAACTCCTCATGGTAGGAAAAGAATGCGTAACAGTAGTTT TGCGAGTACTTCCGGAAGTAGTCGGAGTAGTGGTTGGTCAAGTGGCGGAAGTTCTGGTGGATTTCGCGGAGGTGGAGGTA GTTTCGGTGGCGGTGGGAGTTCAGGGAGTTGGTAG
Upstream 100 bases:
>100_bases AACCAATCTCTGCTTATTATGGAGCCACACGCATCCAAAAGTAATAAAAAATTCTTGTAACAATCTTTTCAAAAACCAAT GTTCTTCTATGCAAAGGATA
Downstream 100 bases:
>100_bases GTAAGGACTTGGATTCAGGAAATCGTTTGCATCGGATATTTTTTAAAAAATTTGGGAACTTTTTTGGATCCAAACGGGTT TAGTATATAGTGAAATACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MVFFILLFPIFLISKDVPKLKARVMDETWTLNADFVSALEKQLKDHERKTSNQIAVYIIPSLEGETLEEYSIKVAETWKL GQKGKDNGVLLLVAIEDRKLRIEVGYGLEGVLTDVLCRHIIENEIKPSFKKGEYDVGIQNGVKTIMNAIEGEYQIPEPKD YSHLGPLSFLGELSHGSEEIPIGLRIFLSFFIVFVLGIFTYFAANAPYVGWFIYFFLFPFWSLFPTAIHGANIGATVFLI YAIGIGIYKLYHLLTPHGRKRMRNSSFASTSGSSRSSGWSSGGSSGGFRGGGGSFGGGGSSGSW
Sequences:
>Translated_304_residues MVFFILLFPIFLISKDVPKLKARVMDETWTLNADFVSALEKQLKDHERKTSNQIAVYIIPSLEGETLEEYSIKVAETWKL GQKGKDNGVLLLVAIEDRKLRIEVGYGLEGVLTDVLCRHIIENEIKPSFKKGEYDVGIQNGVKTIMNAIEGEYQIPEPKD YSHLGPLSFLGELSHGSEEIPIGLRIFLSFFIVFVLGIFTYFAANAPYVGWFIYFFLFPFWSLFPTAIHGANIGATVFLI YAIGIGIYKLYHLLTPHGRKRMRNSSFASTSGSSRSSGWSSGGSSGGFRGGGGSFGGGGSSGSW >Mature_304_residues MVFFILLFPIFLISKDVPKLKARVMDETWTLNADFVSALEKQLKDHERKTSNQIAVYIIPSLEGETLEEYSIKVAETWKL GQKGKDNGVLLLVAIEDRKLRIEVGYGLEGVLTDVLCRHIIENEIKPSFKKGEYDVGIQNGVKTIMNAIEGEYQIPEPKD YSHLGPLSFLGELSHGSEEIPIGLRIFLSFFIVFVLGIFTYFAANAPYVGWFIYFFLFPFWSLFPTAIHGANIGATVFLI YAIGIGIYKLYHLLTPHGRKRMRNSSFASTSGSSRSSGWSSGGSSGGFRGGGGSFGGGGSSGSW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=161, Percent_Identity=35.4037267080745, Blast_Score=110, Evalue=9e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 33620; Mature: 33620
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFFILLFPIFLISKDVPKLKARVMDETWTLNADFVSALEKQLKDHERKTSNQIAVYIIP CCHHHHHHHHHHHCCCCHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEE SLEGETLEEYSIKVAETWKLGQKGKDNGVLLLVAIEDRKLRIEVGYGLEGVLTDVLCRHI CCCCCCHHHHHEEHHHHHHCCCCCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHHH IENEIKPSFKKGEYDVGIQNGVKTIMNAIEGEYQIPEPKDYSHLGPLSFLGELSHGSEEI HHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC PIGLRIFLSFFIVFVLGIFTYFAANAPYVGWFIYFFLFPFWSLFPTAIHGANIGATVFLI CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH YAIGIGIYKLYHLLTPHGRKRMRNSSFASTSGSSRSSGWSSGGSSGGFRGGGGSFGGGGS HHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGSW CCCC >Mature Secondary Structure MVFFILLFPIFLISKDVPKLKARVMDETWTLNADFVSALEKQLKDHERKTSNQIAVYIIP CCHHHHHHHHHHHCCCCHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEE SLEGETLEEYSIKVAETWKLGQKGKDNGVLLLVAIEDRKLRIEVGYGLEGVLTDVLCRHI CCCCCCHHHHHEEHHHHHHCCCCCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHHH IENEIKPSFKKGEYDVGIQNGVKTIMNAIEGEYQIPEPKDYSHLGPLSFLGELSHGSEEI HHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC PIGLRIFLSFFIVFVLGIFTYFAANAPYVGWFIYFFLFPFWSLFPTAIHGANIGATVFLI CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH YAIGIGIYKLYHLLTPHGRKRMRNSSFASTSGSSRSSGWSSGGSSGGFRGGGGSFGGGGS HHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGSW CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]