Click here to switch to the map view.

The map label for this gene is yraR [H]

Identifier: 183222318

GI number: 183222318

Start: 3074076

End: 3074768

Strand: Reverse

Name: yraR [H]

Synonym: LEPBI_I2970

Alternate gene names: 183222318

Gene position: 3074768-3074076 (Counterclockwise)

Preceding gene: 183222319

Following gene: 183222317

Centisome position: 85.42

GC content: 41.13

Gene sequence:

>693_bases
ATGAAAATATTATTATTAGGTGGAACGGGGCTTGTCGGCAAACAAGTGTTACTTTCTCTCCTGTTCTACCCACAAATCAA
AAAAGTAATCGTTTGGGCTCGTCATTTTGAAAACTCCGCCAAACCAAACCTTCCCATCGAAGTGATCAGAGCCACTTGGG
AAGATTTCCAGTCAGGCAAAGTGAGTGTCCCAGAGGGGATTGACGCTGTCTTTTGTTGTTTGGGAACAACAATTGGCAAA
GCAGGTAGCCAGGAAAAATTTCGTGAAATTGATTTTGATTACCCTTTACTTGCCGCAAGACAAGCGAAAGAAAAAAAGAT
CCCAGGCTTTTATATCATCACTGCTATGGGATCTGATCCCAACTCTTCCATTTTTTATAACCGAGTGAAGGGCGAGTTGG
AATGGGAATTAAAAACTCTGAAATTCCCATTTTTAGGAATTTTTCGGCCGTCCTTACTCATCGGAGACAGAGAAGAATTT
CGTATTGGCGAAAAAATAGGGGAAGTGATGGGGAACTTCATTCCTTTTGGAATTTTGGGATTACAAAAATACAAACCCAT
CCAAGCCGCTTATGTTGCCAAAGCAATGATCCATTCTTTGTTAAAGGACCAACCTGCAGATGGATCGTTACCCGTTGTAA
AAATTTATGAAAACGATGTCCTTTGGGAGATCGGCAAGGACCATTCTTTTTGA

Upstream 100 bases:

>100_bases
ATTCTAAAATCAAAAATGTAATCTACCATATTGCGGGGATTCAATTTTTAGAAAAAATCAATTTAACAGATTCGATGCTC
GCCAGAAGTTTGGAGATCAA

Downstream 100 bases:

>100_bases
TTCCCGATAATAAACAAAAACCCTATTCTAAAACCAAATACATCATCTTAAGTTTTGTGGTTCACTTCATTGTGAGAGTT
TGGTATTTATTTGTCCGCAA

Product: putative Ser/thr kinase-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKILLLGGTGLVGKQVLLSLLFYPQIKKVIVWARHFENSAKPNLPIEVIRATWEDFQSGKVSVPEGIDAVFCCLGTTIGK
AGSQEKFREIDFDYPLLAARQAKEKKIPGFYIITAMGSDPNSSIFYNRVKGELEWELKTLKFPFLGIFRPSLLIGDREEF
RIGEKIGEVMGNFIPFGILGLQKYKPIQAAYVAKAMIHSLLKDQPADGSLPVVKIYENDVLWEIGKDHSF

Sequences:

>Translated_230_residues
MKILLLGGTGLVGKQVLLSLLFYPQIKKVIVWARHFENSAKPNLPIEVIRATWEDFQSGKVSVPEGIDAVFCCLGTTIGK
AGSQEKFREIDFDYPLLAARQAKEKKIPGFYIITAMGSDPNSSIFYNRVKGELEWELKTLKFPFLGIFRPSLLIGDREEF
RIGEKIGEVMGNFIPFGILGLQKYKPIQAAYVAKAMIHSLLKDQPADGSLPVVKIYENDVLWEIGKDHSF
>Mature_230_residues
MKILLLGGTGLVGKQVLLSLLFYPQIKKVIVWARHFENSAKPNLPIEVIRATWEDFQSGKVSVPEGIDAVFCCLGTTIGK
AGSQEKFREIDFDYPLLAARQAKEKKIPGFYIITAMGSDPNSSIFYNRVKGELEWELKTLKFPFLGIFRPSLLIGDREEF
RIGEKIGEVMGNFIPFGILGLQKYKPIQAAYVAKAMIHSLLKDQPADGSLPVVKIYENDVLWEIGKDHSF

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To yeast YER004W [H]

Homologues:

Organism=Homo sapiens, GI148728172, Length=231, Percent_Identity=31.6017316017316, Blast_Score=102, Evalue=2e-22,
Organism=Homo sapiens, GI148728168, Length=231, Percent_Identity=31.6017316017316, Blast_Score=102, Evalue=2e-22,
Organism=Homo sapiens, GI148728164, Length=231, Percent_Identity=31.6017316017316, Blast_Score=102, Evalue=2e-22,
Organism=Homo sapiens, GI148728166, Length=231, Percent_Identity=31.6017316017316, Blast_Score=102, Evalue=4e-22,
Organism=Escherichia coli, GI87082218, Length=205, Percent_Identity=32.6829268292683, Blast_Score=104, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI71983631, Length=232, Percent_Identity=30.1724137931034, Blast_Score=108, Evalue=3e-24,
Organism=Saccharomyces cerevisiae, GI6320840, Length=160, Percent_Identity=31.875, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000534 [H]

Pfam domain/function: PF01118 Semialdhyde_dh [H]

EC number: NA

Molecular weight: Translated: 25824; Mature: 25824

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILLLGGTGLVGKQVLLSLLFYPQIKKVIVWARHFENSAKPNLPIEVIRATWEDFQSGK
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
VSVPEGIDAVFCCLGTTIGKAGSQEKFREIDFDYPLLAARQAKEKKIPGFYIITAMGSDP
EECCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEECCCC
NSSIFYNRVKGELEWELKTLKFPFLGIFRPSLLIGDREEFRIGEKIGEVMGNFIPFGILG
CCCEEEEECCCEEEEEEEEECCCHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCHHHHH
LQKYKPIQAAYVAKAMIHSLLKDQPADGSLPVVKIYENDVLWEIGKDHSF
HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCCCCC
>Mature Secondary Structure
MKILLLGGTGLVGKQVLLSLLFYPQIKKVIVWARHFENSAKPNLPIEVIRATWEDFQSGK
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
VSVPEGIDAVFCCLGTTIGKAGSQEKFREIDFDYPLLAARQAKEKKIPGFYIITAMGSDP
EECCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEECCCC
NSSIFYNRVKGELEWELKTLKFPFLGIFRPSLLIGDREEFRIGEKIGEVMGNFIPFGILG
CCCEEEEECCCEEEEEEEEECCCHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCHHHHH
LQKYKPIQAAYVAKAMIHSLLKDQPADGSLPVVKIYENDVLWEIGKDHSF
HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]