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The map label for this gene is 183222281

Identifier: 183222281

GI number: 183222281

Start: 3028611

End: 3029321

Strand: Reverse

Name: 183222281

Synonym: LEPBI_I2932

Alternate gene names: NA

Gene position: 3029321-3028611 (Counterclockwise)

Preceding gene: 183222283

Following gene: 183222280

Centisome position: 84.16

GC content: 39.38

Gene sequence:

>711_bases
ATGAATCAGACTTCTTATTCAACGGAAGAAATATTAGAACTTGTCAAAGAATGTGGGACAGGCAATGAAAAGGCCTTAGA
AAAGTTTTTTGAGCATTATTCCCAAGATATTTATAATTTCCCCATTCGTGTGTTCCATCTAACGGAAGACGATGCCTCTG
ATTATTATATTTATGCCTTTGAACGTTTAAAATCGGGCAAACGATTCAAAAGTTTTGTAGGGAAATCCAGTTTTAAAACT
TGGTTTTTCTCCGTACTACGAAACCTACTCATCGATTGGCAACGTACCAAACGGGAAGTGAAAACCCAAACCATCTCTAA
GGTCAACCAAGAAGGGAAAGAATACAGCACGATCGAGGACGAACCAGACACACGCGCCGATGCTTTAGCCCTTGCCCATG
ACGTCACAGACCAATTCCAATCCGTACTTTCCACAATCAAAATGGAAAACCGGATTGTTTTCAAATTGTCGTTTGTGTAT
TATTTGCACCTCGATCCGGAAGAATTACAATTCGTGGCGGAAAAAACAAAACGTAGTGAGGAAGAAATTCGCACCGAAAT
CCTGAATCTCCGAGAGGATTTGTCCCATCGGGAAGAGGATAACCTCAAAATGGAAGATAAGATCACATCTTTGTATTTGA
ATATTCTCGATTTGAAGGAACAAAAAAAAACAAAAAGCCCAAGGGGACTCAGTAGAAGCACAATATTATAA

Upstream 100 bases:

>100_bases
CTTCCGCGAAAATAAAACTTGCCAGAAGAGTCAAAATCACAACAATACGTTTCATGTTATTAGAAGTCTCTTTGTGGGTT
CTTTTTTAGGAAAGTAGTTT

Downstream 100 bases:

>100_bases
AGAACGATTGGACCATGCCCTTGCGAAGAAGTACGAACAACGCAAAAAACTCATCGAGAAAAAACAAAAAGGACACTTTC
TTGTCCGCACCCCTTACCGG

Product: RNA polymerase ECF-type sigma factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MNQTSYSTEEILELVKECGTGNEKALEKFFEHYSQDIYNFPIRVFHLTEDDASDYYIYAFERLKSGKRFKSFVGKSSFKT
WFFSVLRNLLIDWQRTKREVKTQTISKVNQEGKEYSTIEDEPDTRADALALAHDVTDQFQSVLSTIKMENRIVFKLSFVY
YLHLDPEELQFVAEKTKRSEEEIRTEILNLREDLSHREEDNLKMEDKITSLYLNILDLKEQKKTKSPRGLSRSTIL

Sequences:

>Translated_236_residues
MNQTSYSTEEILELVKECGTGNEKALEKFFEHYSQDIYNFPIRVFHLTEDDASDYYIYAFERLKSGKRFKSFVGKSSFKT
WFFSVLRNLLIDWQRTKREVKTQTISKVNQEGKEYSTIEDEPDTRADALALAHDVTDQFQSVLSTIKMENRIVFKLSFVY
YLHLDPEELQFVAEKTKRSEEEIRTEILNLREDLSHREEDNLKMEDKITSLYLNILDLKEQKKTKSPRGLSRSTIL
>Mature_236_residues
MNQTSYSTEEILELVKECGTGNEKALEKFFEHYSQDIYNFPIRVFHLTEDDASDYYIYAFERLKSGKRFKSFVGKSSFKT
WFFSVLRNLLIDWQRTKREVKTQTISKVNQEGKEYSTIEDEPDTRADALALAHDVTDQFQSVLSTIKMENRIVFKLSFVY
YLHLDPEELQFVAEKTKRSEEEIRTEILNLREDLSHREEDNLKMEDKITSLYLNILDLKEQKKTKSPRGLSRSTIL

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27928; Mature: 27928

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQTSYSTEEILELVKECGTGNEKALEKFFEHYSQDIYNFPIRVFHLTEDDASDYYIYAF
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEEHH
ERLKSGKRFKSFVGKSSFKTWFFSVLRNLLIDWQRTKREVKTQTISKVNQEGKEYSTIED
HHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EPDTRADALALAHDVTDQFQSVLSTIKMENRIVFKLSFVYYLHLDPEELQFVAEKTKRSE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEECCHHHHHHHHHHHHCHH
EEIRTEILNLREDLSHREEDNLKMEDKITSLYLNILDLKEQKKTKSPRGLSRSTIL
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNQTSYSTEEILELVKECGTGNEKALEKFFEHYSQDIYNFPIRVFHLTEDDASDYYIYAF
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEEHH
ERLKSGKRFKSFVGKSSFKTWFFSVLRNLLIDWQRTKREVKTQTISKVNQEGKEYSTIED
HHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EPDTRADALALAHDVTDQFQSVLSTIKMENRIVFKLSFVYYLHLDPEELQFVAEKTKRSE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEECCHHHHHHHHHHHHCHH
EEIRTEILNLREDLSHREEDNLKMEDKITSLYLNILDLKEQKKTKSPRGLSRSTIL
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA