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The map label for this gene is 183222251

Identifier: 183222251

GI number: 183222251

Start: 2996236

End: 2997342

Strand: Reverse

Name: 183222251

Synonym: LEPBI_I2902

Alternate gene names: NA

Gene position: 2997342-2996236 (Counterclockwise)

Preceding gene: 183222254

Following gene: 183222249

Centisome position: 83.27

GC content: 37.76

Gene sequence:

>1107_bases
ATGGAACAGGAATTTTCTATGACGACACAAGCTGAATTCAAAGTCAAAAACCCCATCGATTGGGTTACGACCATTTTTTT
ACTCACTTCCCCCCTCGTTGGTATTTTTGGGACCTTGTATGTGGCACTTTACGAGACAATTCATCTTGGCACCTGGGCTC
TCTTTTTGTTTTATTTTTTTGCGACAGGAATGGGGATTACAGTCGGTTACCACAGACTTTTTTCTCATAAAGCTTATGAG
GCAAAATCTCCCATCAAACTATTGTTATTATTATTTGGAGCCGCGGCGTTTCAATCGACGGCGCTCGAATGGAGTGAAGA
CCATCGTATCCATCACAAATTTGTGGATACAGACAAAGATCCATATTCCATCAAAAAAGGATTTTGGTATGCCCATATAG
GTTGGTTGTTTCGGAAACGAAATTATGTGCAACAAGGTGTCCAAGATTTGGCAAGTGATCCTTTGGTGCTTTGGCAACAT
AAACATTTTTATTCCATCTCCATCTTCATGTGTTTTATTTTACCTGGACTCATCACGATGTTATGGGGATCCTTCTTAGA
AGGATTTTTTGTCGCTGGTTTTTTACGATTATTTGTGGTTCACCAGTTTACCTTTTTTATCAACAGTGCCTGCCATGTTT
GGGGAGAGAGAACGTTTTCAAAAGAACAAACAGCACGAGATAATTGGGTCATCGCCTTTTTTACGTTTGGTGAAGGATTT
CATAACTTTCACCATGAATTCCAAATGGATTACCGGAATGGAATTCGATGGTATGATTACGATCCATCCAAATGGATGAT
CAAATTTCTTTCTTTTTTTGGCCTTACATATAATTTAAAAAAAGTGTCTGAAGAAAAAATTTTACAAAAGACGATGTTCA
TCAAAGAAAAAGAAACATTACATCAGTTTGCAAATCTTGGTGAAGAAAAACTAAAAACCTGGTCAGAACAATTGGCACAT
CTTAGAGAAACGGCAATCGCTGAATTCCAAAAATGGTCCAAAGCGAAACAAACGGCCAATGAAAAAGAAGCAGTGGTTTC
GAAAGAAAAATTTGAAACTACCAAAGAAAACTGGGAAAAACTTCTGAGCCAACCACTGTTTTTTTGA

Upstream 100 bases:

>100_bases
AAATGAGGACTCGGCGCCCCCATTGTTCTAAAATTCCTGGTTTGTAACGGTCTGTACTCATTTTTTTGCAACCAGAGTCC
TCCACAGGGACTCACACTCC

Downstream 100 bases:

>100_bases
TCGATTAACCTCTCCTCTCCCTAAAAATTTCTTTGGGGAGATTCGGAACATCGCCTGGACCAACTAACGGCAAATAGACC
ATAAACAAGGTTCGTCCAGG

Product: fatty acid desaturase family proteiin

Products: NA

Alternate protein names: Fatty Acid Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Acyl-CoA Desaturase; Fatty Acid Desaturase Subfamily; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Family Proteiin; Stearoyl-CoA Desaturase; Fatty Acid Desaturase Domain Protein; Fatty Acid Desaturase Family Protein; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Membrane-Bound Fatty Acid Desaturase; Long Chain Acyl-CoA Desaturase; Delta-9 Fatty Acid Desaturase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Fatty Acid-CoA Desaturase; Acyl-Coa Desaturase; Delta-9-Acyl-Lipid Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Eucaryotic Stearoyl-CoA 9-Desaturase; Stearoyl/Acyl-CoA Desaturase; Fatty Acid Desaturase Protein; Fatty-Acid Desaturase-Like Protein

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MEQEFSMTTQAEFKVKNPIDWVTTIFLLTSPLVGIFGTLYVALYETIHLGTWALFLFYFFATGMGITVGYHRLFSHKAYE
AKSPIKLLLLLFGAAAFQSTALEWSEDHRIHHKFVDTDKDPYSIKKGFWYAHIGWLFRKRNYVQQGVQDLASDPLVLWQH
KHFYSISIFMCFILPGLITMLWGSFLEGFFVAGFLRLFVVHQFTFFINSACHVWGERTFSKEQTARDNWVIAFFTFGEGF
HNFHHEFQMDYRNGIRWYDYDPSKWMIKFLSFFGLTYNLKKVSEEKILQKTMFIKEKETLHQFANLGEEKLKTWSEQLAH
LRETAIAEFQKWSKAKQTANEKEAVVSKEKFETTKENWEKLLSQPLFF

Sequences:

>Translated_368_residues
MEQEFSMTTQAEFKVKNPIDWVTTIFLLTSPLVGIFGTLYVALYETIHLGTWALFLFYFFATGMGITVGYHRLFSHKAYE
AKSPIKLLLLLFGAAAFQSTALEWSEDHRIHHKFVDTDKDPYSIKKGFWYAHIGWLFRKRNYVQQGVQDLASDPLVLWQH
KHFYSISIFMCFILPGLITMLWGSFLEGFFVAGFLRLFVVHQFTFFINSACHVWGERTFSKEQTARDNWVIAFFTFGEGF
HNFHHEFQMDYRNGIRWYDYDPSKWMIKFLSFFGLTYNLKKVSEEKILQKTMFIKEKETLHQFANLGEEKLKTWSEQLAH
LRETAIAEFQKWSKAKQTANEKEAVVSKEKFETTKENWEKLLSQPLFF
>Mature_368_residues
MEQEFSMTTQAEFKVKNPIDWVTTIFLLTSPLVGIFGTLYVALYETIHLGTWALFLFYFFATGMGITVGYHRLFSHKAYE
AKSPIKLLLLLFGAAAFQSTALEWSEDHRIHHKFVDTDKDPYSIKKGFWYAHIGWLFRKRNYVQQGVQDLASDPLVLWQH
KHFYSISIFMCFILPGLITMLWGSFLEGFFVAGFLRLFVVHQFTFFINSACHVWGERTFSKEQTARDNWVIAFFTFGEGF
HNFHHEFQMDYRNGIRWYDYDPSKWMIKFLSFFGLTYNLKKVSEEKILQKTMFIKEKETLHQFANLGEEKLKTWSEQLAH
LRETAIAEFQKWSKAKQTANEKEAVVSKEKFETTKENWEKLLSQPLFF

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI53759151, Length=273, Percent_Identity=39.5604395604396, Blast_Score=199, Evalue=5e-51,
Organism=Homo sapiens, GI148596961, Length=277, Percent_Identity=35.0180505415162, Blast_Score=197, Evalue=9e-51,
Organism=Homo sapiens, GI148596938, Length=150, Percent_Identity=36.6666666666667, Blast_Score=112, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI17561776, Length=296, Percent_Identity=36.1486486486487, Blast_Score=184, Evalue=7e-47,
Organism=Caenorhabditis elegans, GI17540878, Length=260, Percent_Identity=38.0769230769231, Blast_Score=180, Evalue=8e-46,
Organism=Caenorhabditis elegans, GI17561774, Length=263, Percent_Identity=34.2205323193916, Blast_Score=160, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6321383, Length=273, Percent_Identity=39.9267399267399, Blast_Score=243, Evalue=3e-65,
Organism=Drosophila melanogaster, GI24646500, Length=300, Percent_Identity=33.3333333333333, Blast_Score=186, Evalue=2e-47,
Organism=Drosophila melanogaster, GI24646295, Length=309, Percent_Identity=33.3333333333333, Blast_Score=183, Evalue=1e-46,
Organism=Drosophila melanogaster, GI24646303, Length=250, Percent_Identity=36.8, Blast_Score=181, Evalue=9e-46,
Organism=Drosophila melanogaster, GI24646299, Length=250, Percent_Identity=36.8, Blast_Score=181, Evalue=9e-46,
Organism=Drosophila melanogaster, GI24646305, Length=250, Percent_Identity=36.8, Blast_Score=181, Evalue=9e-46,
Organism=Drosophila melanogaster, GI24646301, Length=250, Percent_Identity=36.8, Blast_Score=181, Evalue=9e-46,
Organism=Drosophila melanogaster, GI24646297, Length=250, Percent_Identity=36.8, Blast_Score=181, Evalue=9e-46,
Organism=Drosophila melanogaster, GI24662393, Length=280, Percent_Identity=34.6428571428571, Blast_Score=176, Evalue=3e-44,
Organism=Drosophila melanogaster, GI21358571, Length=280, Percent_Identity=32.1428571428571, Blast_Score=157, Evalue=9e-39,
Organism=Drosophila melanogaster, GI21358573, Length=281, Percent_Identity=32.3843416370107, Blast_Score=152, Evalue=3e-37,
Organism=Drosophila melanogaster, GI161079187, Length=304, Percent_Identity=25, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24651333, Length=304, Percent_Identity=25, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43539; Mature: 43539

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQEFSMTTQAEFKVKNPIDWVTTIFLLTSPLVGIFGTLYVALYETIHLGTWALFLFYFF
CCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATGMGITVGYHRLFSHKAYEAKSPIKLLLLLFGAAAFQSTALEWSEDHRIHHKFVDTDKD
HHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCC
PYSIKKGFWYAHIGWLFRKRNYVQQGVQDLASDPLVLWQHKHFYSISIFMCFILPGLITM
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
LWGSFLEGFFVAGFLRLFVVHQFTFFINSACHVWGERTFSKEQTARDNWVIAFFTFGEGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEECCCHH
HNFHHEFQMDYRNGIRWYDYDPSKWMIKFLSFFGLTYNLKKVSEEKILQKTMFIKEKETL
HHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
HQFANLGEEKLKTWSEQLAHLRETAIAEFQKWSKAKQTANEKEAVVSKEKFETTKENWEK
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LLSQPLFF
HHHCCCCC
>Mature Secondary Structure
MEQEFSMTTQAEFKVKNPIDWVTTIFLLTSPLVGIFGTLYVALYETIHLGTWALFLFYFF
CCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATGMGITVGYHRLFSHKAYEAKSPIKLLLLLFGAAAFQSTALEWSEDHRIHHKFVDTDKD
HHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCC
PYSIKKGFWYAHIGWLFRKRNYVQQGVQDLASDPLVLWQHKHFYSISIFMCFILPGLITM
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
LWGSFLEGFFVAGFLRLFVVHQFTFFINSACHVWGERTFSKEQTARDNWVIAFFTFGEGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEECCCHH
HNFHHEFQMDYRNGIRWYDYDPSKWMIKFLSFFGLTYNLKKVSEEKILQKTMFIKEKETL
HHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
HQFANLGEEKLKTWSEQLAHLRETAIAEFQKWSKAKQTANEKEAVVSKEKFETTKENWEK
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LLSQPLFF
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA